Difference between revisions of "Os05g0102600"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]]
GeneName = Os05g0102600|
 
Description = Zinc finger, FYVE/PHD-type domain containing protein|
 
Version = NM_001060922.1 GI:115461574 GeneID:4337533|
 
Length = 4829 bp|
 
Definition = Oryza sativa Japonica Group Os05g0102600, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
 
AP = Chromosome 5:133407..138235|
 
CDS = 133461..133898,134985..135517,135618..135743,136113..136212,136337..136401<br>,136505..136607,136718..136856,136964..137178,137260..137910<br>|
 
GCID = <gbrowseImage1>
 
name=NC_008398:133407..138235
 
source=RiceChromosome05
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008398:133407..138235
 
source=RiceChromosome05
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgcctgatctcccctgcgacggcgatggcgtctgcatggtctgccgcgtcgcctcccctcccgaggtcgatctcctccgttgctccacctgcgccaccccgtggcactccccctgcctctccaagccccccgcccttgccgacgccgcccaatggagttgccccgactgctccggggactccaccgacgccccgcccccggccccggcaccgctcgcccctgggagtgccggccaactcgtcgccgccatccgcgccatcgagtgcgacgccaccctctccgaccaggaaaaggcacgccgccgccaggagcttctcggcggcgccgcgcccgccggtgccgacgccgatgatgacgagggggacgacgtcctcgaggtcatcggcaagaacttcagctgcgccttctgcatgaagctgcccgaacgccccgtcaccacaccatgtggccataacttttgcttgaagtgcttccagaaatggatccacagcggaaaaaggacatgtggtaaatgccgggcacaaataccagcaaaaatggcagagcagccaagaatcaactcagcattagtttctgttatccgtatggctaaggtttcaaagaatgccaactcagctgtctctgcagctgcgtatcattacatacgaaatgatgatagacctgacaaggcttttacaactgaaagggctaagagggctggaaaagctaatgcttcaagtggccagatctttgttactatcccacccgaccattttggccccattcttgcagagaatgaccccaagagaagcattggtgttctagttggggatacatgggaagacagacttgagtgcaggcaatggggtgcccattttcctcacgtggctggtattgctggccaatccacacatggtgctcagtcggtagccctctcgggtgggtatgtcgatgatgaggaccatggggaatggtttctatatactggaagtggtggaagagatctaagtgggaacaagcgtacaaacaaggagcagtcctcagaccagaaatttgagaagctgaatgctgctcttcgtattagttgcctcaagggttaccctgtcagggttgtgcggtcccacaaagagaagcgttcttcatatgctcctgaagctggtgtgaggtatgatggagtttacaggattgaaaaatgttggaggaagattagtgttcagggtaaattcaaggtttgcaggtatctctttgtacgttgtgacaatgaaccagctccttggactagtgatatttatggtgaccgtccgaggccactccccaaagttgatgagctgaaaggtgcaacagacatatcagagaggaaaggaactccttcatgggactttgatgagaaagaaggctggaagtgggtgaagcctccaccaatcagcagaaagcctaacctatcaggggatcctgcaactgacaaggaaatccggagggttgcaaggcgtgcccagatgtctgtgactgaaaggctgctgaaagagtttggatgttccatttgcaagcaagtgatgaaggaaccactcactactccatgtgctcataacttctgcaagttgtgtttggttgggacatatggtagtcaatcgtctatgagggagagaagccggggtgggcggactctaagggcacagaagattgtgaagaagtgcccttcatgtccaactgatatttgtgacttcctagagaatccacagatcaatcgagagatgatggatttgattgagtccttgcaaagaaaggctgttgaagaaggagataccaagacaagctcagatgttagcaatggtgctgagtcatctggagatgatggaaacaacgaagctttagagaagggagaggatgatagcagcttgaaggatgatggcagcttgaaggatgatggcaaagtggtcaaggctgtggttgtaatcaaggaagaggacctgcagcctaagaagagcaaaggagaagatgagaaagaacaaggtgacaagaagatggacagtgctgatgtggtggacattgcagttgaaaagaaacaggcgacgaagcgggcttctgagaaggctgagaagaagcaggcaaggaagcgcaagggggatgctgttgccacaaatgatggtaaaaggatgaaaacaggtggtgatgctatggagacagcagcggaagaggatgctcccctgagcggcggaactcctgtgaagcgcaacagcaggaagagtagtgaggttgatgccaaaggcggtggcggtagtcctgttgtgagcagccctcgcagggtgacgaggagcaatgccaaggctagcggtgaagctgatggtagccctgcgacaaggaccaggagggctacccgcgctgaagcctga</cdnaseq>|
 
AA = <aaseq>MPDLPCDGDGVCMVCRVASPPEVDLLRCSTCATPWHSPCLSKPP                    ALADAAQWSCPDCSGDSTDAPPPAPAPLAPGSAGQLVAAIRAIECDATLSDQEKARRR                    QELLGGAAPAGADADDDEGDDVLEVIGKNFSCAFCMKLPERPVTTPCGHNFCLKCFQK                    WIHSGKRTCGKCRAQIPAKMAEQPRINSALVSVIRMAKVSKNANSAVSAAAYHYIRND                    DRPDKAFTTERAKRAGKANASSGQIFVTIPPDHFGPILAENDPKRSIGVLVGDTWEDR                    LECRQWGAHFPHVAGIAGQSTHGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKR                    TNKEQSSDQKFEKLNAALRISCLKGYPVRVVRSHKEKRSSYAPEAGVRYDGVYRIEKC                    WRKISVQGKFKVCRYLFVRCDNEPAPWTSDIYGDRPRPLPKVDELKGATDISERKGTP                    SWDFDEKEGWKWVKPPPISRKPNLSGDPATDKEIRRVARRAQMSVTERLLKEFGCSIC                    KQVMKEPLTTPCAHNFCKLCLVGTYGSQSSMRERSRGGRTLRAQKIVKKCPSCPTDIC                    DFLENPQINREMMDLIESLQRKAVEEGDTKTSSDVSNGAESSGDDGNNEALEKGEDDS                    SLKDDGSLKDDGKVVKAVVVIKEEDLQPKKSKGEDEKEQGDKKMDSADVVDIAVEKKQ                    ATKRASEKAEKKQARKRKGDAVATNDGKRMKTGGDAMETAAEEDAPLSGGTPVKRNSR                    KSSEVDAKGGGGSPVVSSPRRVTRSNAKASGEADGSPATRTRRATRAEA</aaseq>|
 
DNA = <dnaseqindica>55..492#1579..2111#2212..2337#2707..2806#2931..2995#3099..3201#3312..3450#3558..3772#3854..4504#ctcctccattccctcccttcctcgcccccaaaaaccctagccgccgccgccgccatgcctgatctcccctgcgacggcgatggcgtctgcatggtctgccgcgtcgcctcccctcccgaggtcgatctcctccgttgctccacctgcgccaccccgtggcactccccctgcctctccaagccccccgcccttgccgacgccgcccaatggagttgccccgactgctccggggactccaccgacgccccgcccccggccccggcaccgctcgcccctgggagtgccggccaactcgtcgccgccatccgcgccatcgagtgcgacgccaccctctccgaccaggaaaaggcacgccgccgccaggagcttctcggcggcgccgcgcccgccggtgccgacgccgatgatgacgagggggacgacgtcctcgaggtcatcggcaagaacttcagctgcgccttctgcatgaagctgcccgaacgccccgtcaccgtcagtactcttgcggggcctttcccccattcttcctcttactacttgctttgcttatatgtacgatgatttatcttaacgctagggtgatgatgggggctatcctatcccctctcttcacacatttatattcattacttacattagagttgtatcatccctgattatccgtcaatcttattttgagttgacgctgccatttattcttttctgttggttcaatttgcatttcctgttatcgtttaaggtttctaactagttgaaatgaccatgtaccatttctacatgatattgtttgcttttgctactcatttcttatatttcttatttacgctaccatttgaattccaataacggaacaagtcttctaaaaaggcacccacataacctgcttaggtgctaggcttacatcctcccaccagaccactcttaactgattatcatgaaccagatcatcgatgttacgcacctcgtagagtgatgcttacatttctttatttctattaattgagactgcaatgcttgttacaattcaagtttaacttgttgaacacatcgattgcatgccctttctagatgataattgtttgctttggtaatgccaactggtatgtcactcctaattttcaccacatgcacacatttactatgcctagatatgtttgttttagctcataccaaatccaccgtacaattctgataatgcaaacagtattctaaaaaggcaatccacgtaacctgcctaggctctaggattaggcttacaccgtcctgccttgccagcctagctcattacatcacccaagcggctgcctaatcagtcactagacatttgtatgtggtacagctagcttctattgccatcacatgcttgttcttctggattgatgcaataccttgcattgttaaaagtgctgtcttgttcttttggggtattggtttaaccttccagtttctgcacataattcttattttgatccatgcattgtaggtaggtaaaagttcttgctattctgtcaattcattggacccttttttttttgggtagcgtttctaaccatcagattctacttttgtcttgggcagacaccatgtggccataacttttgcttgaagtgcttccagaaatggatccacagcggaaaaaggacatgtggtaaatgccgggcacaaataccagcaaaaatggcagagcagccaagaatcaactcagcattagtttctgttatccgtatggctaaggtttcaaagaatgccaactcagctgtctctgcagctgcgtatcattacatacgaaatgatgatagacctgacaaggcttttacaactgaaagggctaagagggctggaaaagctaatgcttcaagtggccagatctttgttactatcccacccgaccattttggccccattcttgcagagaatgaccccaagagaagcattggtgttctagttggggatacatgggaagacagacttgagtgcaggcaatggggtgcccattttcctcacgtggctggtattgctggccaatccacacatggtgctcagtcggtagccctctcgggtgggtatgtcgatgatgaggaccatggggaatggtttctatatactggaaggttagcaaacttgaccatttgccatcattcagtttttctcagtgatctctgatatgagcaattgctaatacactctataatataatttatacttgtacagtggtggaagagatctaagtgggaacaagcgtacaaacaaggagcagtcctcagaccagaaatttgagaagctgaatgctgctcttcgtattagttgcctcaagggttaccctgtcagggttgtgcggtatgttctttctgccatgattacacttagcagtttaatcttaaggagataatgttatgcctgagtaaattgtcatacctttgtaatctgtgcctttccattattattataattggtaaaatcttgctgtagaaagataattctgatctgccgctgttatagttatgtagatatttgttggctcttgaaacagataatttttgtaggactactactgtcgctctatggagtactactgtttagtgtatatatttgttctcttttgtttgtctgtctgttattgatgatccaaatatatatccttttcactattcaaatgatttatagtttgtcatgcccccctaactcattacattcccttaaaaaaaggtcccacaaagagaagcgttcttcatatgctcctgaagctggtgtgaggtatgatggagtttacaggattgaaaaatgttggaggaagattagtgttcaggtaacgccattctcttgtacacagctttgtgaatgttgctttgtagttttgtgctctgcagttcatcagttgataattctttttattggaaacataatggatattttgctgtcttgtctcttagggtaaattcaaggtttgcaggtatctctttgtacgttgtgacaatgaaccagctccttggactaggttcgttgaaatgcttacttttgacttgagacatgcatattgttcattattcatttgagcaacacattttgttcatactgacattatgttatttggttttaagtgatatttatggtgaccgtccgaggccactccccaaagttgatgagctgaaaggtgcaacagacatatcagagaggaaaggaactccttcatgggactttgatgtatgtgcctgtttctatgtgatgcaatatcatcatataatgctttattttggctccatgtcaccatactatgctaccgctaacctctgatttctattggttcataacaggagaaagaaggctggaagtgggtgaagcctccaccaatcagcagaaagcctaacctatcaggggatcctgcaactgacaaggaaatccggagggttgcaaggcgtgcccagatgtctgtgactgaaaggctgctgaaaggttctttctgttgcatgcttgttatttagatatgtactattacaacttgtgttcgtagcttcgaagcactaaattgctcactctatattggtttatgtttcctgcagagtttggatgttccatttgcaagcaagtgatgaaggaaccactcactactccatgtgctcataacttctgcaagttgtgtttggttgggacatatggtagtcaatcgtctatgagggagagaagccggggtgggcggactctaagggcacagaagattgtgaagaagtgcccttcatgtccaactgatatttgtgacttcctagagaatccacaggtacaacaagtttatgtttgttgaagcatgctattacatgtaattttcttgctcatgcttggctttgtttgcttctttcagatcaatcgagagatgatggatttgattgagtccttgcaaagaaaggctgttgaagaaggagataccaagacaagctcagatgttagcaatggtgctgagtcatctggagatgatggaaacaacgaagctttagagaagggagaggatgatagcagcttgaaggatgatggcagcttgaaggatgatggcaaagtggtcaaggctgtggttgtaatcaaggaagaggacctgcagcctaagaagagcaaaggagaagatgagaaagaacaaggtgacaagaagatggacagtgctgatgtggtggacattgcagttgaaaagaaacaggcgacgaagcgggcttctgagaaggctgagaagaagcaggcaaggaagcgcaagggggatgctgttgccacaaatgatggtaaaaggatgaaaacaggtggtgatgctatggagacagcagcggaagaggatgctcccctgagcggcggaactcctgtgaagcgcaacagcaggaagagtagtgaggttgatgccaaaggcggtggcggtagtcctgttgtgagcagccctcgcagggtgacgaggagcaatgccaaggctagcggtgaagctgatggtagccctgcgacaaggaccaggagggctacccgcgctgaagcctgaatgaagatggatgaatggctggttggctggctgtagaggggaagaagacggagactggagccattttggggtcgtattcgtatattctatctatttagtaatttaggccgtttgccttgtgctgttgctctagctcttttgatccacaaggggtgaactggaactgccgcggtgtgcttttgggatggcttgggttgggttgttagttgaaggaatatatacttatatacagtggttgctttacctttacctgtatggatgtatgatggatgttcctcatacaactttccaattccaattactggcatggtttgccttggattct</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001060922.1 RefSeq:Os05g0102600]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 5]]
 
[[Category:Chromosome 5]]
 

Latest revision as of 08:16, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information