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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
| − | GeneName = Os05g0110400|
| |
| − | Description = GRAS transcription factor domain containing protein|
| |
| − | Version = NM_001187245.1 GI:297723620 GeneID:9271968|
| |
| − | Length = 6573 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os05g0110400, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
| |
| − | AP = Chromosome 5:532753..539325|
| |
| − | CDS = 532753..534690,535428..535493,536572..538644,539239..539325|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008398:532753..539325
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008398:532753..539325
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcccatgcccctcttccttcacttctgtgtctcaaggaacctatatatgatgttgttgctgaattggaactgctgataagtaagcagcaactcagcttgtacaactacagccccagcgatccgcagctgttttcccagccaaccacaggatcaagaacgtatttgtcaggtgcagtcaccatccctgggatttgcaatgacaaaagtaatcttggacaacaacaatttcagattgatgcagcgcttagtctagggtaccagaggatcagatcaagcgatgccctttgctacataagtcgggtgctgatggaggacgtcgatgagagggttgacctgcaccaaggggaggctgctcttcaggctgcagagaaacccttctatgatattcttggccaggtatatccaccatcgctaaaccggctagcactccatagcgcaaatgaaccagatacgcctgatgagagcagtagcagaaacaattatcataataggtaccatagtagccattccagtttcaacatgttacagcccttgccaaccccattgagtccatatagctatggcaggagtctttttcttccaaaccaacacttggtaagcactgcctggacttctacctttggcatccctggcttccaaattagaagaggtgccgaggaggcaaagagatttgttccaattattgataagttggtgatcgatttggacactgaccgggggctctccatttcaaaaatgaccacgaaggcaaaagtaggagacaagaaaagatatgcaatctttgagttgacagatcaaaggcacagcccttacaccacagacttggatatcttggaagggaggaacagcaaacgctatgccatcacttactgtgaaataatccggaatgatatgtttgacagggttctgctctgctatggtgtggagaatttcgccgaagcatcaaatcttcgaaaaataatgacgaagcaagcacgcaagaattcactgaatggacaaaccagaggatctgcacaacggaaattacggggtatgaaacaactcaagaaggatgtagttgatctcaggaatctcctcatccactgtgcacaagcagtagcagctgacgaccgcatttcggccagtgaactagtgaagaagataagacagcattcttcaccagatggagatagtaaccagaggttggcattttacttggtggatggtctggaggcgcgcttggctgggatcgggagccaggtgtatcgcaagctcatggcaagccgaaccagtgctgagagtttgttgaaggcttacagcctctacctttcagcttgccctttcgaaagggcgtcattcgcctatgcaaaccaaactattcttgatgcatcaaaggggcagcaaccaagaaaggtgcacattgttcatttcggcatttgcactggctttcagtggccatcattgattcagcggcttgcaaatgaagaagggggtccacccaagcttaggatcacaggtatagatatgccccagccaggtttccacccctgtgaaataattgaggagacagggaagcggttggctgattatgcaaacttgttcaaggtgccttttcaatatcagggcattgcttcacggtgggaaaccgtacaaattgaggacctgaacattgacaaggatgaagtgctcatagtcaactgtatgttcaggatgaagaatcttggtgatgagatggtatctatgaatagcgcaagggatagggtgctgaaaataatgaggatgatgaacccaagggtttttattctcggtattgtcaatggatcatacagctctcccttcttcatcacacgtttcaaagaggttctgttccattactcttcattgtttgacatgattgatgcaaatgttccacgggataacgaggcgaggaagatgatagaggggggactctttgggcaggaagcacttaacatcatagcatgcgagggtgcagaaaggactgagaggccagaaagttacaagcagtggcaagcacggtgcctcaaggctgggttcaagcagctccctgtcgatccagccaccttgaaagagataataaatatgaagaaagggatttaccatgaggactttgtagctgatgaagatggtgcctggctactacaaggatggaaagggagaaaaagtgtcaagaagaaggttacaagaaataaccctaatattaatcagccagatgtcaacaagaaaatcacaaatttctgcttcagaagcttaaagcaatgcaggtctagcataatggacagccctgagtattgtcagaccaactcaaacataactcttgattatataaacagaatattgatggaggaggatattgatgaaaagatcagcataaaaaaaggacaggatgcacttcaggcgacagagaagcccttctatgatattcttgggaaggcatacccatcttcatctaaggagacagcaattaacggtgacagtcaagcagattaccctgataatggtagcagcagttatcatgaacaggcatgtagtggtagctttgttagtgatctccttgggtcacaggatgcgcattcgataaccaccgactggtcttctgaatttgaccgtttggctttgcaattcaggagaggtgttgaggaagcaaagaggttcattccaaatattgaaaagttggtggatgatccagagaagaatggtctttatgcttgcaaacaaacaacagagacaacagaacagaagggcaagcatgagaacaaaataaggaatcatcctcatgatcctcatgttgagcacatagagttgatggaagcaaggaacagtaagcatatggccatctccactagtgaaacaatacgggatgaaatgtttgatagtattctgctctgcaataggcagctccctggtgaagttgctaaccttagaggaatgatggcaaaagaagcaagcgacaacccaaagaaatttcaaagcaaaggatatggaaaagggcaaaggaagccacacagtagtaagaagaaacagaaagaggcaatagatctcagtgttcttctcatccaatgtgcacaagcgatagcatctaacaaccatccctttgctagtgagctactgaggaaaataaggcatcacgctttgccagatggagatggttctcagaggctagcaaactgctttgcagatggcctcgaggctcgcttggctgggactgggagtcaaatgtacgaaaaactgatggcgaaacaaacgagcaccagagacatgctaaaggcctatcatctatattttgtagcatgcccttttgagatggtaacatactacttctccaacaaaaccatcattgatgcattggaggggaaaacaacattgcatatcgttgattttggcatcctcttcggctttcagtggccatgtctaattcagcgacttgcaaagcgagaaggtggcccccctaagcttcgtatcacaggtgtagatgtaccccagcctggttttcgccctcatgaaaggattgaggagactggaaagcggttggcagagtatgcaaatatgttcaacgtacctttccagtatcatggcattgcttcaagatgggaaactatctgcatcgaggatctcagtattgacaaggatgaggtactcataatcaactgcatgtcacgaatgagaaagctaggtgatgagacagaaaacattgatagtgcaagggatagggtactacacatgatgaagaggatgaacccgcaggttttcattcttggtgttgtgaatggattgtacagctccccattctttctgactagattcagagaggttttattccattactcatcactttttgatatgctcgacaacaatgttcctaggaaccatgaagcaaggatattggtagagaaggatctctttgggaatgatgcacttaatgctgtagcatgcgaaggtgcagaaaggattgagaggccagaaagctacaaacagtggcaaatgaggatcctcagggctgggttcaagcaacgtcctgttaatcaagccattctgaatagatcagtacattacaaggaattttatcatgaagactttgtaattgatgaagatagtggctggctgctgcagggatggaaggggaggataatacaggcactgtcaacatggaaagtggaaacctag</cdnaseq>|
| |
| − | AA = <aaseq>MAHAPLPSLLCLKEPIYDVVAELELLISKQQLSLYNYSPSDPQL FSQPTTGSRTYLSGAVTIPGICNDKSNLGQQQFQIDAALSLGYQRIRSSDALCYISRV LMEDVDERVDLHQGEAALQAAEKPFYDILGQVYPPSLNRLALHSANEPDTPDESSSRN NYHNRYHSSHSSFNMLQPLPTPLSPYSYGRSLFLPNQHLVSTAWTSTFGIPGFQIRRG AEEAKRFVPIIDKLVIDLDTDRGLSISKMTTKAKVGDKKRYAIFELTDQRHSPYTTDL DILEGRNSKRYAITYCEIIRNDMFDRVLLCYGVENFAEASNLRKIMTKQARKNSLNGQ TRGSAQRKLRGMKQLKKDVVDLRNLLIHCAQAVAADDRISASELVKKIRQHSSPDGDS NQRLAFYLVDGLEARLAGIGSQVYRKLMASRTSAESLLKAYSLYLSACPFERASFAYA NQTILDASKGQQPRKVHIVHFGICTGFQWPSLIQRLANEEGGPPKLRITGIDMPQPGF HPCEIIEETGKRLADYANLFKVPFQYQGIASRWETVQIEDLNIDKDEVLIVNCMFRMK NLGDEMVSMNSARDRVLKIMRMMNPRVFILGIVNGSYSSPFFITRFKEVLFHYSSLFD MIDANVPRDNEARKMIEGGLFGQEALNIIACEGAERTERPESYKQWQARCLKAGFKQL PVDPATLKEIINMKKGIYHEDFVADEDGAWLLQGWKGRKSVKKKVTRNNPNINQPDVN KKITNFCFRSLKQCRSSIMDSPEYCQTNSNITLDYINRILMEEDIDEKISIKKGQDAL QATEKPFYDILGKAYPSSSKETAINGDSQADYPDNGSSSYHEQACSGSFVSDLLGSQD AHSITTDWSSEFDRLALQFRRGVEEAKRFIPNIEKLVDDPEKNGLYACKQTTETTEQK GKHENKIRNHPHDPHVEHIELMEARNSKHMAISTSETIRDEMFDSILLCNRQLPGEVA NLRGMMAKEASDNPKKFQSKGYGKGQRKPHSSKKKQKEAIDLSVLLIQCAQAIASNNH PFASELLRKIRHHALPDGDGSQRLANCFADGLEARLAGTGSQMYEKLMAKQTSTRDML KAYHLYFVACPFEMVTYYFSNKTIIDALEGKTTLHIVDFGILFGFQWPCLIQRLAKRE GGPPKLRITGVDVPQPGFRPHERIEETGKRLAEYANMFNVPFQYHGIASRWETICIED LSIDKDEVLIINCMSRMRKLGDETENIDSARDRVLHMMKRMNPQVFILGVVNGLYSSP FFLTRFREVLFHYSSLFDMLDNNVPRNHEARILVEKDLFGNDALNAVACEGAERIERP ESYKQWQMRILRAGFKQRPVNQAILNRSVHYKEFYHEDFVIDEDSGWLLQGWKGRIIQ ALSTWKVET</aaseq>|
| |
| − | DNA = <dnaseqindica>4636..6573#3833..3898#682..2754#1..87#atggcccatgcccctcttccttcacttctgtgtctcaaggaacctatatatgatgttgttgctgaattggaactgctgataagtaaggtgcgtgtttgtctactttaactacttgcctgttttccataattagcagacaacaatgttcttgagctcttccatcaggagcctcctgcagttcaacattcagaatgttagaaacgagtacttcaggtgtactgttgtgtaatttatgcaacacaattcaatttgttactggagaccatagttttgcttgttttcatagaagttcacaccgaatcaattataagctgaatttccaaagaaaaaaagggtgaggaaataatgcgctaactggttgcggttccctcttataaacaaccttctatggtttggggatgcaaatgttctgaattctaccaaatgagtaggctgaacataattttgagtatccgtgatcatgaagaagaattcagaatctgtctcatgcaaaacttgcttcactttcccttttacagacaacaaactgaattcatttgctgtgggacaggatatatctgtcattcagttttcaggtggcaaaaaaaaaaaaaacaaatggtgattgagcttccctttgacaatcaatacaccaccacagaaacagaacagccacatgatgggtcttcctgttcttcccagcagcaactcagcttgtacaactacagccccagcgatccgcagctgttttcccagccaaccacaggatcaagaacgtatttgtcaggtgcagtcaccatccctgggatttgcaatgacaaaagtaatcttggacaacaacaatttcagattgatgcagcgcttagtctagggtaccagaggatcagatcaagcgatgccctttgctacataagtcgggtgctgatggaggacgtcgatgagagggttgacctgcaccaaggggaggctgctcttcaggctgcagagaaacccttctatgatattcttggccaggtatatccaccatcgctaaaccggctagcactccatagcgcaaatgaaccagatacgcctgatgagagcagtagcagaaacaattatcataataggtaccatagtagccattccagtttcaacatgttacagcccttgccaaccccattgagtccatatagctatggcaggagtctttttcttccaaaccaacacttggtaagcactgcctggacttctacctttggcatccctggcttccaaattagaagaggtgccgaggaggcaaagagatttgttccaattattgataagttggtgatcgatttggacactgaccgggggctctccatttcaaaaatgaccacgaaggcaaaagtaggagacaagaaaagatatgcaatctttgagttgacagatcaaaggcacagcccttacaccacagacttggatatcttggaagggaggaacagcaaacgctatgccatcacttactgtgaaataatccggaatgatatgtttgacagggttctgctctgctatggtgtggagaatttcgccgaagcatcaaatcttcgaaaaataatgacgaagcaagcacgcaagaattcactgaatggacaaaccagaggatctgcacaacggaaattacggggtatgaaacaactcaagaaggatgtagttgatctcaggaatctcctcatccactgtgcacaagcagtagcagctgacgaccgcatttcggccagtgaactagtgaagaagataagacagcattcttcaccagatggagatagtaaccagaggttggcattttacttggtggatggtctggaggcgcgcttggctgggatcgggagccaggtgtatcgcaagctcatggcaagccgaaccagtgctgagagtttgttgaaggcttacagcctctacctttcagcttgccctttcgaaagggcgtcattcgcctatgcaaaccaaactattcttgatgcatcaaaggggcagcaaccaagaaaggtgcacattgttcatttcggcatttgcactggctttcagtggccatcattgattcagcggcttgcaaatgaagaagggggtccacccaagcttaggatcacaggtatagatatgccccagccaggtttccacccctgtgaaataattgaggagacagggaagcggttggctgattatgcaaacttgttcaaggtgccttttcaatatcagggcattgcttcacggtgggaaaccgtacaaattgaggacctgaacattgacaaggatgaagtgctcatagtcaactgtatgttcaggatgaagaatcttggtgatgagatggtatctatgaatagcgcaagggatagggtgctgaaaataatgaggatgatgaacccaagggtttttattctcggtattgtcaatggatcatacagctctcccttcttcatcacacgtttcaaagaggttctgttccattactcttcattgtttgacatgattgatgcaaatgttccacgggataacgaggcgaggaagatgatagaggggggactctttgggcaggaagcacttaacatcatagcatgcgagggtgcagaaaggactgagaggccagaaagttacaagcagtggcaagcacggtgcctcaaggctgggttcaagcagctccctgtcgatccagccaccttgaaagagataataaatatgaagaaagggatttaccatgaggactttgtagctgatgaagatggtgcctggctactacaaggatggaaagggagagtaatttatgccatatccacatggaagccaaatgaatcatatttggatcagtaagattcaaacagtttttcatgtacatatgctatggtgctcaaaggtgtataggcaactgccaatctctgtatctacttgaacagtcgtaaacacaataaatgaacatatatgtatcctttatatgtattgatttgattgtacatgagcatatatagaaactaaactaaacgaagtgtataacatactttttttatacctttgaaggaggtaccagtccttccatctcaacaatatgtactatttgaaagttcaaggttcctccctaaggaccatactaaaagtcttcttgttttatttcagaacaaagtgtaaatgtgtaatagaaaactactctagtagtgaaactgttgttttctaaaaccaatgtgtctatcccttgttctttcatgcataataggttgtaatagtgcaacatctaagtgcatgtgaatggggaagcaaaaataataattttaaatacctgagaaggagacaaaaaaagctgcaagcaatgaatagctggaatcatacagcttaaacaagagactgtttgtgctccagtgacatgcaattgttctttccatctattagcaaactatttggctggaaacaactacttcattgtataccagtaaattattcttggaagtacaatttctagattatattcataacttttagttctcatattctcatattttttttactcctaagttagattactgattgtattctaaatttccaatggccggttactgtttaacgtgggattagagtaaatagcacaatacgttaaatagttagacaataactttagaatttccagtttacttatcattttcctgggcacatgatgtccttttatcagttgtcacatccttctctttggttataattgggggcatctatgtgtccaaactgaaccaaaaggcccagcctggatgaatgacaatggtgcctagtttgtaacagaaatgatcacaagaaagccatttggaatatgatctgttaccttcatgtcacagttatatgttttataaatcagaaaagtgtcaagaagaaggttacaagaaataaccctaatattaatcagccagatgtcaacaagaaagtaacaagaaataaagaccaagaggaacattaaacaattttcacatcaacaagaaaagctcacccatcagcacaactaaggagcctcagcccctctcataaggactggacaatgccactactctcaatggctcaaaataaagtccccagtttttcacctccctccttcctcaccataggccagatacatcattaagctaggtaaatactgatgtaatctctcttgctgctgttaacaattggtaacagcagtaatagtagtatacatcataaaaagtatatttgggatatattctacagtgtagttggtataccaagttaccaactcctacattttgatacaccaacattttttctcaacaaaaggtgtcttccagagtttggaggttatccatgtcaaaagtatgatttacatagcaggtaagtagtgcatacaatcttcaaaattgggtgccagagatggttttacatgtcagtttatctaggcaaaaaactatgttttgctgattacagtcctgggaggtaccagtacctccgaattttaatgttttcattcatattggcaactcctgttgttaattagcgtggcacctctcaggaccataaaagaactcttgaacttatcctattatcctatctatgacttattttgatattttagcaagttttgagaggcaaaaaaaaaagacattggctggtaaagaaacccttctaaaaggttgacttgctcttttgtagatcacaaatttctgcttcagaagcttaaagcaatgcaggtctagcataatggacagccctgagtattgtcagaccaactcaaacataactcttgattatataaacagaatattgatggaggaggatattgatgaaaagatcagcataaaaaaaggacaggatgcacttcaggcgacagagaagcccttctatgatattcttgggaaggcatacccatcttcatctaaggagacagcaattaacggtgacagtcaagcagattaccctgataatggtagcagcagttatcatgaacaggcatgtagtggtagctttgttagtgatctccttgggtcacaggatgcgcattcgataaccaccgactggtcttctgaatttgaccgtttggctttgcaattcaggagaggtgttgaggaagcaaagaggttcattccaaatattgaaaagttggtggatgatccagagaagaatggtctttatgcttgcaaacaaacaacagagacaacagaacagaagggcaagcatgagaacaaaataaggaatcatcctcatgatcctcatgttgagcacatagagttgatggaagcaaggaacagtaagcatatggccatctccactagtgaaacaatacgggatgaaatgtttgatagtattctgctctgcaataggcagctccctggtgaagttgctaaccttagaggaatgatggcaaaagaagcaagcgacaacccaaagaaatttcaaagcaaaggatatggaaaagggcaaaggaagccacacagtagtaagaagaaacagaaagaggcaatagatctcagtgttcttctcatccaatgtgcacaagcgatagcatctaacaaccatccctttgctagtgagctactgaggaaaataaggcatcacgctttgccagatggagatggttctcagaggctagcaaactgctttgcagatggcctcgaggctcgcttggctgggactgggagtcaaatgtacgaaaaactgatggcgaaacaaacgagcaccagagacatgctaaaggcctatcatctatattttgtagcatgcccttttgagatggtaacatactacttctccaacaaaaccatcattgatgcattggaggggaaaacaacattgcatatcgttgattttggcatcctcttcggctttcagtggccatgtctaattcagcgacttgcaaagcgagaaggtggcccccctaagcttcgtatcacaggtgtagatgtaccccagcctggttttcgccctcatgaaaggattgaggagactggaaagcggttggcagagtatgcaaatatgttcaacgtacctttccagtatcatggcattgcttcaagatgggaaactatctgcatcgaggatctcagtattgacaaggatgaggtactcataatcaactgcatgtcacgaatgagaaagctaggtgatgagacagaaaacattgatagtgcaagggatagggtactacacatgatgaagaggatgaacccgcaggttttcattcttggtgttgtgaatggattgtacagctccccattctttctgactagattcagagaggttttattccattactcatcactttttgatatgctcgacaacaatgttcctaggaaccatgaagcaaggatattggtagagaaggatctctttgggaatgatgcacttaatgctgtagcatgcgaaggtgcagaaaggattgagaggccagaaagctacaaacagtggcaaatgaggatcctcagggctgggttcaagcaacgtcctgttaatcaagccattctgaatagatcagtacattacaaggaattttatcatgaagactttgtaattgatgaagatagtggctggctgctgcagggatggaaggggaggataatacaggcactgtcaacatggaaagtggaaacctag</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001187245.1 RefSeq:Os05g0110400]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 5]]
| |
| − | [[Category:Chromosome 5]]
| |
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Annotated Information
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Structured Information
