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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
| − | GeneName = Os05g0150300|
| |
| − | Description = Similar to Possible global transcription activator SNF2L1 (SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 1)|
| |
| − | Version = NM_001061199.1 GI:115462128 GeneID:4337825|
| |
| − | Length = 10138 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os05g0150300, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
| |
| − | AP = Chromosome 5:2852371..2862508|
| |
| − | CDS = 2852581..2853069,2853645..2853776,2853922..2854025,2854622..2854734,2856851..2856948<br>,2857078..2857257,2857335..2857556,2857712..2857846,2857931..2858213<br>,2858300..2858373,2858606..2858826,2858905..2858992,2859093..2859186<br>,2859269..2859457,2859811..2859842,2859984..2860063,2860160..2860249<br>,2860353..2860422,2860682..2860727,2860812..2860870,2861030..2861195<br>,2861371..2861549,2861628..2861834,2861971..2862075,2862178..2862198<br>|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008398:2852371..2862508
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008398:2852371..2862508
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggggaagccggggaagtatggcgacggcgacgacgacgactcggaggaggagcagctctccccttcgtcttccgccggcgaggaggaggaggaggaggtagaagaggaagagggggaggagcagcaggaggagcagggggaggaggaggaggggtttagcggggacgaggaggagcaggaggtggagggtgaggcggatggggagcaagtggaggaggaggaagaggaggagtctagtgtcggggaggaggaagcagaggcggagggtgaggaggaggaagaggaggtggaggaggagcagggggctggggaagaggaagaggaggaggttgatgaggaggagatcgaggcggtcaccaccggcgccggaggggacgacgacgacgaagaagtgggcgatgacgggggcgcggaggaggagtcgcagtccacggaggacgacgaggtcgccgccgggaaggatggcggcggtgaagatggcgacaagttggaagatgctactggaaacgcagagatcgggaagcgggagcgagcaaagctcagggagatgcaaaagctgaagaagcacaaaatccaggaaatactggatgcccaaaataaggccattgatgctgacatgaacaacaaggggaagggacgtctgaagtatctcctgcagcaaactgaaatatttgctcattttgcgaaaggaaaccaatcgacagagaagaaatcacgtggaaggggacgtcatgcatcaaagatgacagaggaggaagaagatgaggagtatctcaaggaggaggaagatgcccttgatggtgcaggagggacccgtctggtttcacaaccatcatgcataaaaggaaagatgagagattaccaactagctggacttaattggctcatacgcttgtatgagaatggcatcaatggaatattggctgatgagatgggtcttggaaaaacccttcaaactatatcactgcttggatatttgcatgagtttagaggaataaccggtccccacatggttgttgcaccaaagtccactcttgggaactggatgaaggaaatacaacggttttgtcctgttctgcgtgctatcaagttcttaggaaaccccgaagaaaggaaccatatccgggaaaatttgttagtcccagggaagtttgacgtctgtgttactagttttgaaatggcaattaaagaaaaaactgcattgaagcgtttcagctggcgttatattattattgatgaagcccaccggataaaaaatgaaaattcccttctctctaagactatgaggatttacaatactaattatcgtctcctcattacgggcactccactacagaataatcttcatgaactttggtctcttctcaacttcttgttgcctgaaatatttagctctgctgagacttttgatgattggttccaaatctcaggggaaaatgatcaacatgaagttgttcagcagcttcataaggttcttcgtccatttctgcttcggaggcttaaatctgatgttgagaaaggtttaccaccaaaaaaggaaactatacttaaagttggaatgtctgagatgcaaaaacaatattatcgtgctctgcttcagaaagatctggaggttgtcaatgccggtggtgaacgcaaacgccttcttaacatagccatgcaattgcggaagtgctgcaaccatccatatttattccaaggtgctgagcctggtccaccctataccactggagaccatctaattgagaatgcaggaaaaatggttctgttagataaattacttcccaagctaaaggaacgtgattccagagtacttattttctcacagatgactaggctcttggacatcttggaagattatctgatgtacaaggggtatcaatattgccgaattgatgggaatactggtggtgaagatcgtgatgcttcgattgaagctttcaacaagccagggagtgaaaaatttgttttcttgctttcgactagggcaggtggtcttgggataaatcttgctactgctgatgttgttattctttatgacagtgactggaatcctcaagtggatctgcaagcgcaagatcgtgcacatagaattggtcaaaagaaagaagttcaagtttttcgtttctgcactgagtatacaattgaggaaaaggtgattgagagagcttataagaagcttgccctggatgctttggtcatacaacagggtcgattggcagagcagaaagctgtcaataaggatgagctattgcagatggtcagatttggtgctgaaatggtattcagctccaaggatagcacaataacagatgaagatattgaccgcatcatcgctaagggagaagaagcaacagcacaacttgatgcaaaaatgaagaagttcacagaagatgctattaagttcaaaatggatgacactgctgaactgtatgattttgatgatgataaggatgaaaacaaacttgattttaagaagttggtcactgacaactggatagagccaaccagcagaagagaaaggaagcgaaactactctgagtctgattatttcaagcaagcacttcgccaaggtgcaccagcaaaacctagggaaccgagaattcctcgaatgccacacttgcatgatttccagttcttcaacactcagagactcaatgaattatatgagaaggaagtcaaataccttgtgcaagcaaatcagaaaaaggatacggttggtgagggtgatgacgaagatcaactggaaccgttgactgtggaggagcaagaagagaaagagcagctattggaagagggcttttcgacatggacaaggagggacttcaatacattcatccgtgcttgtgagaagtacggtcgtaatgacataaagaacatatcctctgaaatggaggggaaaacagaagaggaggtgcagcggtacgctaaagttttccaggaaagatacaaggaattaaatgattatgaccgagttattaagaacattgagaaaggagaagcaaggatataccggaaggatgagattatgaaagctattgggaaaaagctagaccgctataagaacccttggttagagttgaaaattcagtatggccagaataaagggaagttatacaacgaagaatgtgatcgttttatgttatgcatggtgcacaaactcggatacggaaactgggatgaactgaaagcagcctttcgcatgtcgcccttgttccgatttgattggtttgtgaagtctagaacaacccaagagctagctaggaggtgcgagaccctcattcgtctagtggagaaggagaaccaagaatatgatgagcgtgagagattggccaggaaagataagaagaatatgtcgccagcaaagcgttcttcatcaaggtcgctcgatacccctccacaaagctcttcgaagaggaggcgccagtcctacactgaagccaatgcaggctcgggaaggagaaggcgagggtga</cdnaseq>|
| |
| − | AA = <aaseq>MGKPGKYGDGDDDDSEEEQLSPSSSAGEEEEEEVEEEEGEEQQE EQGEEEEGFSGDEEEQEVEGEADGEQVEEEEEEESSVGEEEAEAEGEEEEEEVEEEQG AGEEEEEEVDEEEIEAVTTGAGGDDDDEEVGDDGGAEEESQSTEDDEVAAGKDGGGED GDKLEDATGNAEIGKRERAKLREMQKLKKHKIQEILDAQNKAIDADMNNKGKGRLKYL LQQTEIFAHFAKGNQSTEKKSRGRGRHASKMTEEEEDEEYLKEEEDALDGAGGTRLVS QPSCIKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGIT GPHMVVAPKSTLGNWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPGKFDVCVTSF EMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLH ELWSLLNFLLPEIFSSAETFDDWFQISGENDQHEVVQQLHKVLRPFLLRRLKSDVEKG LPPKKETILKVGMSEMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLF QGAEPGPPYTTGDHLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMY KGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDS DWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRL AEQKAVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAQLDAKMKKFTE DAIKFKMDDTAELYDFDDDKDENKLDFKKLVTDNWIEPTSRRERKRNYSESDYFKQAL RQGAPAKPREPRIPRMPHLHDFQFFNTQRLNELYEKEVKYLVQANQKKDTVGEGDDED QLEPLTVEEQEEKEQLLEEGFSTWTRRDFNTFIRACEKYGRNDIKNISSEMEGKTEEE VQRYAKVFQERYKELNDYDRVIKNIEKGEARIYRKDEIMKAIGKKLDRYKNPWLELKI QYGQNKGKLYNEECDRFMLCMVHKLGYGNWDELKAAFRMSPLFRFDWFVKSRTTQELA RRCETLIRLVEKENQEYDERERLARKDKKNMSPAKRSSSRSLDTPPQSSSKRRRQSYT EANAGSGRRRRG</aaseq>|
| |
| − | DNA = <dnaseqindica>211..699#1275..1406#1552..1655#2252..2364#4481..4578#4708..4887#4965..5186#5342..5476#5561..5843#5930..6003#6236..6456#6535..6622#6723..6816#6899..7087#7441..7472#7614..7693#7790..7879#7983..8052#8312..8357#8442..8500#8660..8825#9001..9179#9258..9464#9601..9705#9808..9828#atttctttcctcttccgtttcttcactagttcatttcacgccgcccccgcgcgagcggcgacaaggcgaaaccgcttcaatataagatcaccccaatcccccaattcggcaactccaatccaattcaattccccacccccgatccgcctctcgcaaatctcccgaaaccctagccgccaccgccgccgccgccgcctcgagcgaggcgtgatggggaagccggggaagtatggcgacggcgacgacgacgactcggaggaggagcagctctccccttcgtcttccgccggcgaggaggaggaggaggaggtagaagaggaagagggggaggagcagcaggaggagcagggggaggaggaggaggggtttagcggggacgaggaggagcaggaggtggagggtgaggcggatggggagcaagtggaggaggaggaagaggaggagtctagtgtcggggaggaggaagcagaggcggagggtgaggaggaggaagaggaggtggaggaggagcagggggctggggaagaggaagaggaggaggttgatgaggaggagatcgaggcggtcaccaccggcgccggaggggacgacgacgacgaagaagtgggcgatgacgggggcgcggaggaggagtcgcagtccacggaggacgacgaggtcgccgccgggaaggatggcggcggtgaagatggcgacaaggtgggtgtggcacggtttggtgatctaggtgctggtaggggttgggtggtttatgtttgaatctgttgataggtggtagcgattatgctatgatttctctttttctgaaacgaaatcagcagatttccgttgattatacagatttttttcctgtttccctctgtttagctgtaaagtaatctgttatgcgtctatactcctgtagacatttgagggatgatattagtgttcatttaaaattgtagattgtttttttttagaaagagaggcagtcctctcccgtgcaataggttgtaaattttagtaaagttgttcttgtttggtccatctggtgaggattcctgtatccgtttgggttttctttatgcgtaagtgtgctgtagcaaaatgtttaaagcttcgtggtatatttgtgctactgaagtagttttttatcgcaattagccaatcagcatggtttacagttatcaaaggagtgattgttagttctaaaaaagagtttcaaaatattttgaaggggagtgactactctgagtgtcactcaacatcactgagttgcttgtcttcaattgcagttggaagatgctactggaaacgcagagatcgggaagcgggagcgagcaaagctcagggagatgcaaaagctgaagaagcacaaaatccaggaaatactggatgcccaaaataaggccattgatgctgacatggtttgataagttcccatatctcctagcgattaacctccaaataggaataccttattgacatgtgatctaaatcttctgtgcttttttgcgttcacttcatggctttgagttctgtggtagcttagaatattaaattcatggacagaacaacaaggggaagggacgtctgaagtatctcctgcagcaaactgaaatatttgctcattttgcgaaaggaaaccaatcgacagagaagaaatcacgtggaaggtatattcttccttggataaatatgctaaccccatactttccattaagggaagttactgctaaccatttgtcatttgttacaacagtacagtgccaatatttttctgtaatatgcgaaatactttctgtttttgagacctggtagtgatgacttgccgtcccattcccatcttcatagccttgatgaactccaagatatcatgtagtgcattcctttagctgaacattgtcaggattattaagaaaagcttttctctattggaacttcaacatattcagatttcagatttaaagtagttaaaaatggtcaagctgttaaaacatgcacctaaccagtcatctttggctcatttatcattttcagtaaattttgatgagtgcatagagctttcaacatctttttgtgccctagctatctagtattctagtatcaagtggtatttgttaaacatatttcaataatttttggggaatggtactacttaccacaacattcagatctatttatccagggcatctatctcttcttgttgtggtacatatttctttgttcttcataggtcttctttgtttagctaatgtggtaaggatcttaggggacgtcatgcatcaaagatgacagaggaggaagaagatgaggagtatctcaaggaggaggaagatgcccttgatggtgcaggagggacccgtctggtttcacaaccatcatgtgagcatttgcttgatgattctgtcaaaccttttgttttacaagccagtcttaaatgcagtttgtgtaacgaaaatgtttattttgcatggaaggttcgatttgtttgatggcgaaacagtatagaacggttcgcaatttcattgcgaatttgcgattacttgtgctgaattaatcaacattttgtgatttttttttctgttcggatggtgtttaaaacgaaagctgttgtgagggaatgcagtaaattatgttgcttcatctcacggcctgttatggaaaggaaaccctggttctgatttctcaactactcttgctcctactggcaggaaaggagataatatctatagccattatttgagcaagactgggtgaaagtgttaatgttgtttgtctgtgttagtgatgaggatgtagagcctgatggccataactagatttgtattctccgtgttttttttgtactggataggaataggatgtgctcctccccctttttttttttttctgaaacggatgtaggaactcagccgttaatttaagactgggaaaggtgcaataaaataccaacaccaacccaagtcaagaagacgtaccaatagagagaacctctcataaagaccactcacacattttgttcggcctcacccaagtataaagccattgtttcgatgaaatgcaacctcaaacactttgactagaacataggcgttgctttgaatttacaatattacctagacactcgtgtccaattttttttgccgaatcggaccccagaatccaagtcggcttccgacatccatgctggattccaagaagtattttgtgtgcccaattcttttgtgccaaaggcacaccgtcgagaagacataccaatagagagaacctcccataaacaccactcacacattttgttcagtgtcacctgagaataaagccattgtttcgatgaaatgcaacctcgaacactttgactagaacatatgtgttgctttgaatttattttgctgaatcggacatcccgagtccgaatcgggttttgacgctcgtgttggattccaggaaggattttgtgtgtcaaattcttttgtgccgaatcagacacactagttcgagtcggattccggcacacgtttccatgtccacgtgagaattatactaattttcattggcttacacgtgttgggcaaggattccgttccatccaaacaaagctataaaattgtttgtccaagtttgctagttttaattctcctaaaatgtttcatctttaggtcaattcaaatttattttgtcattgatcagacgattgatgatattcccccgaaaaagcccttgaaatgatatctatgaggactccgattagggagcttttcacggcaccctgatataattaagcgtaaacggttcgaatatttgctccactgaaaacagacaaaaaggacgcggtaaatttagaaaggaagaagaaactgacttctgtctttctaaaattgttcttttgcatgctgcttgtttagtcgacatgcttttgttcttgtgtgaaccaaggtccaagtcagcgaccgtatgctgtgcaacatcagctttttgtcaaaatagtctgttttttaaagaaaaaaacatcaaagcagtctgtagaacaaaagttgttagttttttatctattaaagaggaggaattagagggattaattgtggctttcatggattgcacttaattgtagaagaaaaatacatacaacaggtacccggtagtttctacccggtagatctggacatacccgatctgctgctgctcagctggctctctcttagttcgtaggtgtgtgtgatagcaaggtgcaattacgctagttgttgtcctagactcctagttcattcatttgattatattttttggggataagtctgcatccttcacagcatttaacccgtgtttatgtccagatgttgttatcttcacatccttgttataactgaatggtagtgtttatgtacaaatgccctggtagctttctttgtgattaaaatgagtccgtcacagactcgtgcaatctcatcagtttatgttaactactaaatgatcattatattcttgttggtttacttgacaggcataaaaggaaagatgagagattaccaactagctggacttaattggctcatacgcttgtatgagaatggcatcaatggaatattggctgatgagatggtactctattgctcttcattgttgttacacatatcaattaacattaagattatacttattgactcttatatggttatgcttaattcaacttcatgagctcatatttggcatgaaatccttctcgttcagggtctt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tatttacatcgcattctgttcatctttactagaaccacacactgttttggttattacagtaaagtaggacctcacccacttgtttttctcacagggaaggagaaggcgagggtgatctgattattgttcgttcctccccccatatgcatttagggagctcatttggaggttgacatgaaacccaaggggaaaccccagatacatcccaattgtctagcagtagctttagctcaaaaaaaaaaaaaaaaactagcagacataactctagtgagatggttagcttgtataccggttaaagtggttgtgttttaaagttttaaattggacgggcaacattacaaattttaggtgatcataactataacaagtagttgatctctcttttggagacatcaatcaaataaaacaaagttgcttttacctgt</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001061199.1 RefSeq:Os05g0150300]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 5]]
| |
| − | [[Category:Chromosome 5]]
| |
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Annotated Information
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Structured Information
