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| Line 20: |
Line 20: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 5]] |
| − | GeneName = Os05g0588700|
| |
| − | Description = Histone deacetylase interacting domain containing protein|
| |
| − | Version = NM_001063011.1 GI:115465752 GeneID:4339773|
| |
| − | Length = 7225 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os05g0588700, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 5|Chromosome 5]]|
| |
| − | AP = Chromosome 5:29399229..29406453|
| |
| − | CDS = 29399522..29399594,29399671..29399771,29400041..29400193,29400309..29400447,29400554..29400624<br>,29400927..29401238,29401510..29401808,29401916..29402176,29402270..29402376<br>,29402493..29402644,29402721..29402875,29404851..29405046,29405245..29405373<br>,29405445..29405546,29405641..29405794,29405875..29406047|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008398:29399229..29406453
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008398:29399229..29406453
| |
| − | source=RiceChromosome05
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggattcttccgccggtgatcctggcgatggcgttccgtccaaaagggcgaggacggagagggatccctacagagtcgagacgatggaatttttggtacttgtcaagtcagagcttcctgacgacgtatacagccatttcgtccgatctatgatcaagataaggaggcagaggaacatgtcgattgaaaaatgcaaagaaattattctcgagatattggacggccaacctgaagccatacaggtcttcgagcacttcatccaaggatatagcccttgcagagcaaagatgcgtagcaaggcacacaatttcgttgagagagtgaaggcatgtcctgatatcagccgcgaagatttccatgctttgctgaacgttcttgctaaatattataagaacgaaatcaagaccagcgaagaagttctcgaaaaggttgagagaatcataggtaactatcccgagttcctagaagagttcaaaatttttgtgcctcaccacctaagggctcatctgccaaatgagaaatcttgcacaagtccaaagagtagtcgagtcagcgagacgtttgtgagttttactctagatgctatgaataaattggatggtctccgagtaaaagcaaccaatggaagaaaccaagcgactccattgaagtatactcaggaccaaaaccaaaaccatgaaggcagaggttatagtttgaggcataaacaaactaagagaaccactggcctgattgaaaatcctagaaagcaaggtgatgacaaatcacctcatgcagaagatgatgaggaacacaaggctgaacctttgcttcagtggagtacctcacgagaaaacgaattacccctaaaagtggatcctagtaattgcaagcattgcactcctagctattgcctgctaccaaagaattgtgtgactctccagtcaagctaccaaactgaacttggaaggtctattttaaatgattctttggtttctgttacatctggacgtgaggattgctacaagttcagaactaaaaatcaatatgaagaaaacatgtttaagtgtgaagatgacttgtttgagagtgacatgctattgcagaggtttagagcaactgctgactttattgaggatcttcaatatcggtttggcagcaatgtgaaaattcaagaacacctaactcctctacataagaggtgcattgaacagctatatgatgattctggcattgacatgcttgatgctttgtcagaatctgagaacaccagttctgctcttgctgttatactttctcgtctaaatcagaagataggagatttctccgaggcacgattatccttgaataaaatgtgcccagatactgttgccaataattactacagatcacttgatcattgtagtccctccttcaaacaactagacatggaaaggatgagcccaaaagctttgctggcagaagacaaacaaatcagtcggatcaaatctcatactgatattcacattcatgaggacgtaggcgttatcattaactatgcatatagtagaagttgttctactgaagataagccaatgatgaattggacaaagttagtaaaggcatttgtttctgtgaagtttcaatggccagacttgaaggatacagtttctcgcagaaacgtttgtgaacattgtgggatgagcagagattttctcaataatattcctgttgctgtgcttactaatgagtttgttttttcttcaaaggaagtggaaagtctaagagccaagtccaatgagtctacttcttcgcttgatcattttgacgcggaggttgaggagggtgagttcataccagatgtagaaaatatacagttgcgtgttcgatgtttgcctaccaataattctatgcatagtacctatggacattggagtggatctgaagagcataaatcatcaagagatgactccaacaatgaggttggaagttcagaatattttggaagaacatctaaagaatgtgatgcaaacagaggaatatcttgttgcactctggctgtgctctgccggcttctccaggttatgtacgagagactactagtagctaagaatctttcagaaggagcaagcacccatgattcatatgcacatttcaaggagaaactctgcagcctgattgatgggtctactgacaattggaactttgagcagcactgcttgaaatttcttgggcccaactcctacgtactatttactttggataagcttatcgatcgtgttatcaagcagatttgcaagatatatccaagccgtgaagacagctctgtccttcagcggcaagagaggtcaagaagaacatttaacattttgaaagacccagctttgccggcaagaagaacaaactcgtccaaagagctgttgcatcatcaaaatgcaagaggcacatcaattgagttgccgaagcaaggtcgtgaggaagcaaaaggaggttgtgagtcccatggtgacactggaaaaatgaaacagaaccattttcagagaaggaaaaaacgcgctttggagaacggtccaccgagtttttctcagcctggctcagggaatcaagctcataattga</cdnaseq>|
| |
| − | AA = <aaseq>MDSSAGDPGDGVPSKRARTERDPYRVETMEFLVLVKSELPDDVY SHFVRSMIKIRRQRNMSIEKCKEIILEILDGQPEAIQVFEHFIQGYSPCRAKMRSKAH NFVERVKACPDISREDFHALLNVLAKYYKNEIKTSEEVLEKVERIIGNYPEFLEEFKI FVPHHLRAHLPNEKSCTSPKSSRVSETFVSFTLDAMNKLDGLRVKATNGRNQATPLKY TQDQNQNHEGRGYSLRHKQTKRTTGLIENPRKQGDDKSPHAEDDEEHKAEPLLQWSTS RENELPLKVDPSNCKHCTPSYCLLPKNCVTLQSSYQTELGRSILNDSLVSVTSGREDC YKFRTKNQYEENMFKCEDDLFESDMLLQRFRATADFIEDLQYRFGSNVKIQEHLTPLH KRCIEQLYDDSGIDMLDALSESENTSSALAVILSRLNQKIGDFSEARLSLNKMCPDTV ANNYYRSLDHCSPSFKQLDMERMSPKALLAEDKQISRIKSHTDIHIHEDVGVIINYAY SRSCSTEDKPMMNWTKLVKAFVSVKFQWPDLKDTVSRRNVCEHCGMSRDFLNNIPVAV LTNEFVFSSKEVESLRAKSNESTSSLDHFDAEVEEGEFIPDVENIQLRVRCLPTNNSM HSTYGHWSGSEEHKSSRDDSNNEVGSSEYFGRTSKECDANRGISCCTLAVLCRLLQVM YERLLVAKNLSEGASTHDSYAHFKEKLCSLIDGSTDNWNFEQHCLKFLGPNSYVLFTL DKLIDRVIKQICKIYPSREDSSVLQRQERSRRTFNILKDPALPARRTNSSKELLHHQN ARGTSIELPKQGREEAKGGCESHGDTGKMKQNHFQRRKKRALENGPPSFSQPGSGNQA HN</aaseq>|
| |
| − | DNA = <dnaseqindica>6860..6932#6683..6783#6261..6413#6007..6145#5830..5900#5216..5527#4646..4944#4278..4538#4078..4184#3810..3961#3579..3733#1408..1603#1081..1209#908..1009#660..813#407..579#tctttccctcggccgcgcggccgcgccgcgggggttctagaaggttccggaaggtgtggagtctcggtgccctcgtcgctcgcctccttcctccaggcgtccgccgccgccggcatacttgaggtcagtccctccactcgcgtgcgcgaatcaaggcgccgagatcacgagagtactcctcctaatcgcctcggtttcgtcagcccttacggcggattgatgacttggttgaatcgaattcctttttcggtttttttgcgaggggataaccggagcggcggtagattttggttgcctagacgaggccgtcactgtagattcgtctgttctcgtgcaggtctttgctgatttgttgcatctgtctgctcttgtgcaggtgttcgcctaaataattaggagaaatagaatggattcttccgccggtgatcctggcgatggcgttccgtccaaaagggcgaggacggagagggatccctacagagtcgagacgatggaatttttggtacttgtcaagtcagagcttcctgacgacgtatacagccatttcgtccgatctatgatcaagataaggaggcagaggtatcaatcactatatcctctcatctactcggctgtgagttttgatgactgatgataaagaatcctgatcctgaattcaggaacatgtcgattgaaaaatgcaaagaaattattctcgagatattggacggccaacctgaagccatacaggtcttcgagcacttcatccaaggatatagcccttgcagagcaaagatgcgtagcaaggcacacaatttcgttgagagagtgaaggtgcccaaagaaacccgctttgcttgctccctccttgtgtggtgtgggtgctcgtttggtaccaattgttgttaacttgaccttatacctgcaggcatgtcctgatatcagccgcgaagatttccatgctttgctgaacgttcttgctaaatattataagaacgaaatcaagaccagcgaagaagttctcgaaaaggtgttcattcttcaataatggcttgacaaaataattgcaaaggccctgatttcacaatgatttacttgcaggttgagagaatcataggtaactatcccgagttcctagaagagttcaaaatttttgtgcctcaccacctaagggctcatctgccaaatgagaaatcttgcacaagtccaaagagtagtcgagtcagcgaggtatacattacatgcttcgcataacatatgctaaggcctaactgctaatgatcattcctcgtatatcttataacatgttggtgaacaattattttataaataatttattgaactcagtatcactagctcactgctttcagtaaaattttctattctgagcgcatgtgccatcatcagtttatcaaatttcctttgcagacgtttgtgagttttactctagatgctatgaataaattggatggtctccgagtaaaagcaaccaatggaagaaaccaagcgactccattgaagtatactcaggaccaaaaccaaaaccatgaaggcagaggttatagtttgaggcataaacaaactaagagaaccactggcctgattgaaaatcctagaaagcaaggtgtgtgaaagttttctcttaatttgtttattctccaaatacaggcgagccctaggtgctttgctttaacatccttctcaggaaataatgaagttagacacaaataatgaaccctttcttaataacagtcatacatgcccaactgttttcctttttgctagagaatgcacaaatgatttgcgtatctttgcattcacctatttcatggtatcagatgttatttcgaagtatgccctagcaattgagagaaatttgataatttgacactttcttcgtcgccaatttgctttaattgactcttgtgagatgacatgtgtgaccatttgagggaatagaagtgtgccagggtgtcaaataatcgaagcccacatcgtggagtgtcactatcaaatttctcagcaattgagtgctacatttgctagagcttattttcatatatgaaaccagcatggtggcccgcgcagattacgcggctagcatcattgtattttctctcatataatagtataaatatattctcaatttattattaaaatgacaacataaatttaaattttgtactaaccaaactaccaatgtgtaacagtacattcatattgtattgtatatacgtgatagttattaattatttttaatatcaaattttagttatttctaaattgtattcccatatagactctagattcgtcttccaatattattccttattttttaattccgaattttcattatttgtaaattgtacttcctccatttcacaatgtaagtcattctagcatttccctcattcatattgatgttaatgaatctagacatatatatctatctagattcgttaatatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaaggagtatatatatagactctaggctcttcttccaatattatttatttttaattctgaattttattatttctaattgtatttctatgtggactctagactcatcttttaatattctttattttttaattttgaatttcagttgcttctaaattgtattcctatatggactctagactcttcttcccatattttttaattatgaattttagttttttgtaaattgtatttctatatggactttaaactctacttttaattttattattattattattccgaattttagttaattataaattcctatatggactctataatcttattctaatattctttattttttaattcttcatttcagttatttctaaattgtatttatttctaaattatatttctatatggactatatactcttctttcaatattcttttttaattccgacttttagttatttctaaattgtatatctatatggactctaacctaattttaatttacttttttttaattccgaatttttattagttctaaattgtataccggcatggactgtagtcttctcttccaatattctttattttttaattccgaatttcagctatctctaaattgtatttctatatggactttgtttttctttttctccgattaatatgataatttctaggccgtgagagcgaacgtggaggcaagttactagataataaattacaatttacagtctctaggaggaatgcaccttagaattttttaaatgaaaaggttaaaagttgaatatattggttcttaaaccctttcgtgcttcctaaattatcctaaaaagaaactatgaggaccgctattgtgaaccattcaattcaaatgttgtacagcatgatgttccgacttctgagtacaactgttttccaacagttaggtgtgttggtttttatattatctagtttctttctattgatgtgcacatgatacaatgtaacaacagacaaatgcagtatcattttgtgtggctagccacttgtttttgtattttgtatatatttaattgaaccccttgtgttgaagttatgtttaatcatttatgataggtgatgacaaatcacctcatgcagaagatgatgaggaacacaaggctgaacctttgcttcagtggagtacctcacgagaaaacgaattacccctaaaagtggatcctagtaattgcaagcattgcactcctagctattgcctgctaccaaagaatgtaaattcctacaaacgcacaagttttccatgtaaatcattggcatctgttctaacattctctttcttgatctcagtgtgtgactctccagtcaagctaccaaactgaacttggaaggtctattttaaatgattctttggtttctgttacatctggacgtgaggattgctacaagttcagaactaaaaatcaatatgaagaaaacatgtttaagtgtgaagatgacttgtaagtacacagatgttagtttttcagatgcttcagcactgttttcattctttcagctatcagcaaaaatttgcctggtcactgataatcaatgaatgttgtgtactactttttaggtttgagagtgacatgctattgcagaggtttagagcaactgctgactttattgaggatcttcaatatcggtttggcagcaatgtgaaaattcaagaacacctaactcgtaagtatactgtactatgtaaatttttcggagccaaaacttttcgagtggttagctgagtgttacattttttccttgtttttacatgtgcagctctacataagaggtgcattgaacagctatatgatgattctggcattgacatgcttgatgctttgtcagaatctgagaacaccagttctgctcttgctgttatactttctcgtctaaatcagaagataggagatttctccgaggcacgattatccttgaataaaatgtgcccagatactgttgccaataattactacagatcacttgatcattgtagtccctccttcaaacaactagacatggaaaggatgagcccaaaaggtacttttactattatgtactgctgaagctaggttctgcgttataattcatggaaattttaccattttattagttcgttcttactcatttcagtatctctcttgcagctttgctggcagaagacaaacaaatcagtcggatcaaatctcatactgatattcacattcatgaggacgtaggcgttatcattaactatgcatatagtagaagttgttctactgaagataagccaatgatgaattggacaaagttagtaaaggcatttgtttctgtgaagtttcaatggccagacttgaaggatacagtttctcgcagaaacgtttgtgaacattgtgggatgagcagagattttctcaataatattcctgttgctgtgcttactaatgagtttgttttttcttcaaaggtatatgtacttacaacactttactcttagaattatgatgatttcgtgttttggatttgcataaatagcttctgtcatgaaagttaattgatgaacacttactttctcatctttatcaagtaaaagtaacttgggtgtttgtacagttttccccttttccttaatatacatcggtcggcattcttcgccgtcccggcgaaaaaaaaaagtaacttgggtgacttgaaagataaatgtaagtaaagctacatgatttttattttccattcaggaagtggaaagtctaagagccaagtccaatgagtctacttcttcgcttgatcattttgacgcggaggttgaggagggtgagttcataccagatgtagaaaatatacagttgcgtgttcgatgtttgcctaccaataattctatgcatagtacctatggacattggagtggatctgaagagcataaatcatcaagagatgactccaacaatgaggttggaagttcagaatattttggaagaacatctaaagaatgtgatgcaaacagaggaatatcttgttgcactctggctgtgctctgccggcttctccaggtatttcagtatgttcctattacatatttttgtttggattggcgacttttaatatgccagtgagcactgagcaagacagcaagctacacagttcaacacaaatatgtatgctcttactttcaaaaaaatatttatgtatgctcttactttgttatacatgaaagagacggcttgctcaatatgcatcaccatgattgttaatctaatagacagcagtatgatatttcttctggacaaactattggcctctatacctaattattggcattatgatcttattttatttttaatttatgtggcaggttatgtacgagagactactagtagctaagaatctttcagaaggagcaagcacccatgattcatatgcacagtaacgtctaagattctcacctattatctataagtagaattattcaaatttcaccattgaatatctgtgttttaacaacaactttttattttattgaatggtgtagtttcaaggagaaactctgcagcctgattgatgggtctactgacaattggaactttgagcagcactgcttgaaatttcttgggcccaactcctacgtactatttactttggataagcttatcgatcgtgttatcaagcaggtaactgaattcctttgtgcaatggtaaattggaagtgcggtttagcttttcttggtaactttgttcattagttcgttccagacatttgtttaaaattcacttttcttctttcagatttgcaagatatatccaagccgtgaagacagctctgtccttcagcggcaagagaggtcaagaagaacatttaacattttgaaagacccagctttgccggcaagaagaacaaactcgtccaaagagctgttgcatcatcaaaatgcaagaggcgtaagtcttctactctaaaaactttacctactaccagcagcaagctactaagcacgcccactttcatctagttgttgagaacgtgtttagtcatgcatgcttagccatgagatgtgtcatgtgtgcaaatgtgaaatattggtgtcatgcatttcccctttttccacctcgcaaaagaaatacatttcctctgcgtttcactgaatttatcagatattcacaactgttgcatgtgtctttttttcccttgttgcgatattccaattcagacatcaattgagttgccgaagcaaggtcgtgaggaagcaaaaggaggttgtgagtcccatggtgacactggaaaaatgaaacagaaccattttcagagaaggtaaggatcctttgacagaatgattagaattccttattggttccagctatttcgacattatagatgtcttttacaggaaaaaacgcgctttggagaacggtccaccgagtttttctcagcctggctcagggaatcaagctcataattgaacatgtagttatatgcagccctgcagaaggctatagatttgcaaggatctttcaacacaaaatgtgcacggcacaacagctatttgaggatatctggagggaagcagaaattttcatggagaagcaggacacagcataaccagccctagggagaggttctgcctaggcagagagctctgcaacctcccgctctcctgtagtaactctctatcttctcaacctgggtagcggacttggccaaagccctgtaaattgatccttttgggctagttctccaaaccctgtaactttgt</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001063011.1 RefSeq:Os05g0588700]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 5]]
| |
| − | [[Category:Chromosome 5]]
| |
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Annotated Information
Function
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Expression
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Structured Information
