Difference between revisions of "Os08g0102100"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
{{JaponicaGene|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]]
GeneName = Os08g0102100|
 
Description = Nicastrin family protein|
 
Version = NM_001067301.1 GI:115474338 GeneID:4344424|
 
Length = 5675 bp|
 
Definition = Oryza sativa Japonica Group Os08g0102100, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
 
AP = Chromosome 8:114306..119980|
 
CDS = 114499..114561,114643..114732,115200..115301,115393..115560,116183..116243<br>,116334..116446,117472..117549,117641..117781,117879..118043<br>,118123..118215,118443..118509,118632..118735,119243..119388<br>,119650..119926|
 
GCID = <gbrowseImage1>
 
name=NC_008401:114306..119980
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008401:114306..119980
 
source=RiceChromosome08
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq>atgtcgtcgtcgtctccctccggccacctgctcgcctctgtctcctccgccctcgccgtcctcctcctcctcctcgcctgcgtcgagctcggcgacgctgctgccgccgtcggagtctaccgcctcatccagtacgacctcgccggcgcccctctcggctcccgcgccgccgccctcaaccaccacgccgccgccctccctctccccgccgccgccgacctctcccgctccgccctcgtcgcgccgctcctcgatctcccgctcgccttcctccgcgactacttggcggacaaaaaatatctgggaggcttgctcattctactgcctaaaaaactaaaccatgaacccaacaatgaagacaagggacaagtaaaggcttctctggctgagctggaacagttgctcttgcatcaacaagtgccatatccggtctacttcgctttccaggatgaccactttgataacctgctggcggatatacgtaaaattgcctcttcaggtcagccagcctcagcaacaacaggaggttacaagcttgtcgtgtctacgccggaacctagaaaagtggcatctccgaccatttcaaatatccagggatggttacctggattgaaaggagagggtgaaactgaacaacttccaactattgccattgtttcaaattatgatactttcggtgctgcaccagcactttctgtgggaagcgacagcaacgggagtggagctgtggctcttctagagattgcaagactgttttcacgcctctattcaaatcctaagaccagaggcaagtacaaccttctgtttggcttaacatctggtggaccctacaattacaatggaactaacaagtggcttagaagtttcgatcagcgtgtgcgtgagagcattgactatgcaatttgcttgaacagcgttggttcctgggacaatgaactctggatgcatgtgtcaaagccaccagaaaacccctacattaaacaaatctttgaagatttctctgatgtctctaaagagatgggtgtttcagttggaatcaagcacaagaagattaatgtctcaaatcctagggttgcgtgggaacatgagcagttctcaagatttagggtgactgcactaacactttcggaattgtcctctcctcctgactttttagaaagcaccggtggcctttatgacactagagaatcagcagatgctgagtcagtaattagaactgtcagattagtttctgaaagtcttgcgagacacatctatggactaaaaggaaagaatattgatgtttttgcggagaacagcagtttagccatcaaccctcactacatccagtcctggttggatcttttatcacgaacaccacgggttgcaccgtttcttcagaagaacgatccctttatagcagccctaaagaaggaactatctgagcacactgctgatgtccacgttcaaagcgatgttcttgatggcatgttcactttctatgatgcaacaaaggcaactctaaatgtatatcaggttgcaagtgttacttttgatttactgttccttctggtgattggctcctacctaattattctcttcagtttcctagtaatcactacacggggtcttgatgatctcatcaacatattccggcgaccaccatcacgcaaggtcaagggggcataa</cdnaseq>|
 
AA = <aaseq>MSSSSPSGHLLASVSSALAVLLLLLACVELGDAAAAVGVYRLIQ                    YDLAGAPLGSRAAALNHHAAALPLPAAADLSRSALVAPLLDLPLAFLRDYLADKKYLG                    GLLILLPKKLNHEPNNEDKGQVKASLAELEQLLLHQQVPYPVYFAFQDDHFDNLLADI                    RKIASSGQPASATTGGYKLVVSTPEPRKVASPTISNIQGWLPGLKGEGETEQLPTIAI                    VSNYDTFGAAPALSVGSDSNGSGAVALLEIARLFSRLYSNPKTRGKYNLLFGLTSGGP                    YNYNGTNKWLRSFDQRVRESIDYAICLNSVGSWDNELWMHVSKPPENPYIKQIFEDFS                    DVSKEMGVSVGIKHKKINVSNPRVAWEHEQFSRFRVTALTLSELSSPPDFLESTGGLY                    DTRESADAESVIRTVRLVSESLARHIYGLKGKNIDVFAENSSLAINPHYIQSWLDLLS                    RTPRVAPFLQKNDPFIAALKKELSEHTADVHVQSDVLDGMFTFYDATKATLNVYQVAS                    VTFDLLFLLVIGSYLIILFSFLVITTRGLDDLINIFRRPPSRKVKGA</aaseq>|
 
DNA = <dnaseqindica>5420..5482#5249..5338#4680..4781#4421..4588#3738..3798#3535..3647#2432..2509#2200..2340#1938..2102#1766..1858#1472..1538#1246..1349#593..738#55..331#tcggcatctgcatctccgcccccgcccccgtggatctgaagcggcggaagagggatgtcgtcgtcgtctccctccggccacctgctcgcctctgtctcctccgccctcgccgtcctcctcctcctcctcgcctgcgtcgagctcggcgacgctgctgccgccgtcggagtctaccgcctcatccagtacgacctcgccggcgcccctctcggctcccgcgccgccgccctcaaccaccacgccgccgccctccctctccccgccgccgccgacctctcccgctccgccctcgtcgcgccgctcctcgatctcccgctcgccttcctccgcggtacatccctctcctctcctctctcttcttcaattaataattgttacccaccttaattcccttctcaagtcaattctccatctcatctcatcttgcttagtattaccgatccttcctctaatttactctctacactagatagatagagatcggatctcgtctaccatgagctcacctctgctctgtttggcgtgcgctgtttgctttaatggtctttgtcactgatgaactgctgctcaatttcatttacatcatactcagactacttggcggacaaaaaatatctgggaggcttgctcattctactgcctaaaaaactaaaccatgaacccaacaatgaagacaagggacaagtaaaggcttctctggctgagctggaacagttgctcttgcatcaacaagtgccagtaagtcttaactttctctctcattcatcatgcaaccaattcaatactattccatactcccttctttcctacacttgccaactcttcttatgttttaccaattcggtttgtaattacatacagttttggtttcttcgaggcaatattttcagccgtgctcccttatcaattgattgctaaatggagtaggcataccaacagcagccacaaattgcaccaaaaactataacctattaaatgcttaatcagtgtgcctgatgagctctacaaccacaaattaccctacactggagatagtatctgctccatgtaacaacactacaaatatgcacatatggtctcagttatatgtatgactgatacgttatatcatcccccctacgaattagtttcattccaagtgttttcttcatgctatccattattttctactccacatatgtcttgtcccctctttgtttaataactattctatagtagctaacttatttccattactccgtgcagtatccggtctacttcgctttccaggatgaccactttgataacctgctggcggatatacgtaaaattgcctcttcaggtcagccagcctcagcaacaacaggagggtaatacaagaataagaaatcgagcctactttagcgcgtctggcatgttgtactttcaacagtataacatgatactacactgcatgttgccttcttttaatttcctttgtctgcatttgtagttacaagcttgtcgtgtctacgccggaacctagaaaagtggcatctccgaccatttcaaatatccaggtaccctcctcgtaccattagtttacagtttggttcagtgtttattgtttgatttttgtctacgttatactttaatgtattgatccttttctctttcggagatgactggataaaccatggccctgtggctatttgttggaagtgattgttccagctgatattttactaaagtaatactgtttatctgtgagaacgaacatacctgagatgaatactttgatctgaagggatggttacctggattgaaaggagagggtgaaactgaacaacttccaactattgccattgtttcaaattatgatactttcggtgctgcaccagtacgtcttcgtgaaaaatgtttctagtgccttctttaatattcttctagatattttgcataaatgcatattttctcaggcactttctgtgggaagcgacagcaacgggagtggagctgtggctcttctagagattgcaagactgttttcacgcctctattcaaatcctaagaccagaggcaagtacaaccttctgtttggcttaacatctggtggaccctacaattacaatggaactaacaaggttagttattctcttcagttttttttttaaaaaaatctgctttgtggcatctgtttttatcaactcatggctgtatcttttttgaattttggtacagtggcttagaagtttcgatcagcgtgtgcgtgagagcattgactatgcaatttgcttgaacagcgttggttcctgggacaatgaactctggatgcatgtgtcaaagccaccagaaaacccctacattaaacaaatctttgaagtatgttgaccatttcaagcatgttggtgcataacagttattagttgtcaagggcagtcacttttacacctctgaattcttttgctttcaggatttctctgatgtctctaaagagatgggtgtttcagttggaatcaagcacaagaagattaatgtctcaaatcctagggtatgcacttgtcacctttttaaagagtatatattaccattagttctgattaggaatggacatggtgatggtacccacataatatatttatgatccttatagattttactacattcaatgcaatgtgttacatgtctatctgttggactctgttgtcaacacggcactctaatatgtaccagaagtattatcaattgttgatgatgttaaatactgtacatattgcttttaattgtcatgtaggctagtattggactgttcatcatagtttttcttactcaaatggaactgaatgatggatgaaaaccttgtggaggtgcatacaaaagaaacagaatttttccacgagaacttttgtgaaagctcatcgtcttaaatcaaatttgactcagaaaagattgccacaagagagacctcattaaaagaaaaatgtattctaagggcccctgtgaattttttatttcttcctgcagtgccattacatggttttatttgtttggccctcatattagcttcccttgttcgactgtctgaatggttcttagttcatatgtcctaagtatgcgtaattaaatatttattctgcccattgttttctcaacccactgatttgtaacagcagaactttactaacttgcctgtttcatgaccatcacaatcctcacaaccactattgcatttatgcatcatactgtgcaatcttcagcacatagtatgtaccaacatactaatttagtttgcaactttgcatatcttctgctggatgatttgctccttttagcatagtagtagcatggcatggaataaaaaaaatgcatgatcaagaattaactggtaattggcataagggccagtttataaattagttccaaacaagataatatcactggatgttatccttgtttactacctaccaattttgaagatgtaattttggaactgtattatttggactgttcaggggtcctattatatttagtcttatgtttgtagcttgccaagtaacatgctttcaaaacttccaggttgcgtgggaacatgagcagttctcaagatttagggtgactgcactaacactttcggaattgtcctctcctcctgactttttagaaagcaccggtggcctttatgacactaggtaaagcacttataatgttttccttttacatcattaatttatgtgtccattttttctaaccttttgtttgtatttgacttttcactgcagagaatcagcagatgctgagtcagtaattagaactgtcagattagtttctgaaagtcttgcggtaagctaaatcattgcttgtagaagttcttcattttgctttatacactagttcattgatgatgtttgttttattatttgttctaacatgccccccttgggtcagtctattatatacagctgaaataattttagagaatgtaggttatttcagtattgtatatttacatttattattgttttctggatgatctgtactgtttgcgggtttctgctgtgtaagaatttgcaaagctgatcagtggttacttgttttagattctagttgttgcttgaacctggtaagtgcttttattctgattaaagaataatttgactgtccctgtggtatgtagggtagagtgttcaactgatttcccactttgcataaaacttactgtgtagctttgtaaaatgtcaatggagaacctcacgtggttatgatggtgcatcagttttacatgcatattacaatgcttttctgttcacgctatttaggttgcattcttaaatgtgataaacacagggcatcgtggcttcaaaatagctactatgattaatgagtgatattaaagctgactagttgcctctttgcctttctgaactgaagttgaccagttcttatatactaattccatttacagagacacatctatggactaaaaggaaagaatattgatgtttttgcggagaacagcagtttagccatcaaccctcactacatccagtcctggttggatcttttatcacgaacaccacgggttgcaccgtttcttcagaagaacgatccctttatagcagccctaaagaaggttcgtttgccttctatcaaatagagtattcatctagttcacctagttcgtagttttcttgcaaaccatgacatttcatgccctgttgcaggaactatctgagcacactgctgatgtccacgttcaaagcgatgttcttgatggcatgttcactttctatgatgcaacaaaggcaactctaaatgtatatcaggtaagtgtttaggctttgtgtcatttgttcacgtttgagtagaacaattaaaccttgcagcagaatggtctaatatgcttattgtgaagagcatatgccctgctttgtgattccttatttttatgctcgtccgtctcaaaatatagctacttatgcctcttttttggagggattaaggctgagattggaaatggttgtgattggttaagatgagaaagtaggtgaagaattaaatcagggatagttgtgattggttgagatggggaattaggtcgagaagtacattatgagaaatttgaatgctagatgtagctatatattgagacagagggagtattataatattctgctcatgtattctgttatgaattgcttaacagcaacaaagaattcattttaaatggacttatgcaagatatgaacacattgaaatattctcatacattcttcgaattattaattcacaggttgcaagtgttacttttgatttactgttccttctggtgattggctcctacctaattattctcttcagtttcctagtaatcactacacgggtatgtatcatttcaagccttcaaatataagacaggaagctttgtttttcctgcagttgagaacttattttttttaatcagggtcttgatgatctcatcaacatattccggcgaccaccatcacgcaaggtcaagggggcataatagaatagattgtgctttgtgtattagtatccaggaacgcgctgctagttagaagagctagacaccaggacgacaggcgagacgacccagctctccacagcaaacagacttgtaatttcaaaattttcatgttcgatagccaatgtgagtggcttcagatactgcaaggcagaaacatcacgaattttgactg</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067301.1 RefSeq:Os08g0102100]|
 
}}
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Oryza Sativa Japonica Group]]
 
[[Category:Japonica Genes]]
 
[[Category:Japonica Chromosome 8]]
 
[[Category:Chromosome 8]]
 

Latest revision as of 12:53, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information