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| Line 20: |
Line 20: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]] |
| − | GeneName = Os08g0109100|
| |
| − | Description = Similar to SAC domain protein 1 (FIG4-like protein AtFIG4)|
| |
| − | Version = NM_001067343.1 GI:115474422 GeneID:4344468|
| |
| − | Length = 7085 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os08g0109100, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
| |
| − | AP = Chromosome 8:450143..457227|
| |
| − | CDS = 450235..450306,450420..450624,451083..451248,451376..451598,452329..452405<br>,452717..452904,453192..453289,453549..453682,453768..453902<br>,454610..454979,455244..455365,455502..455621,455761..455973<br>,456053..456241,456325..456436,456540..456785|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008401:450143..457227
| |
| − | source=RiceChromosome08
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008401:450143..457227
| |
| − | source=RiceChromosome08
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgacggcggaggcggacgacccgacggcggcggagacgctggagaagttccgcctctacgagacgcgcgcgaggttctacctgatcgggacgtcgcgggagaagcggtggttccaggtgctcaagatcgaccgctccgagcgctccgagctcaacatcagcgaggaccccgtctggtactcccagcaggaggtcaagaacctcctccagcgcatctccgagggcaaccgctccactggcggcctcaccttcgtcaccaaggcctatggcatcgctggttgcatcaagttcttggagtcatattatctgattttggtcaccaagcgctgccaaattggttgcatttgtgggcatcctatttactgtatagatgagagccagatgataaccattccacactcatctgtgcagacagatgttgcaacctctaagaatgagctaaggtacaagaaacttttggctagtgttgatctcaccaaggatttcttctatagctacacataccccattatgcagagcctgcagcagaatgttacttctgcagggatgaaggaaatgccttatgaaaatttatttgtctggaatactttcctgacacagccgattcggtcaaggtgccgcaatactctctggacagtagcgctggtccatgggcatttcaagcaggtcaagctatcaatatttggcagggagctaaatgttgttctcatttctagaagatcacggcattttgcagggacacggtatttgaaaagaggcgtgaatgaccatggaaaagttgctaacgatgttgaaactgagcaaatagtctttgaggaggaagctggttcctggaagggaagaatgagtgcagtagtacagatgcggggatcgatccctctcttttggtcgcaggaggctggccgacttagtcctaagcctgatattattgtgcagagatatgatcctacatatgaagcaactaagttacattttgatgatgtcgctcagcgctatgggcatcctatcataatacttaatttaacaaagacttttgagaaaaggccccgagagatgatgctcaggcgtgaatattttaacgcagttggatatcttaatcaaaatgtcccagaggagaagaaattgagattcatccactgggatttccataaatttgcaaaaagtaagtctgcaaatgttctgggtgttttaggaggtgttgctagtgaagcactggatctcactggattttactacagtggaaagccaaaagttcaaaagaaaaggtcaactcagcttagtagaactaccaccgcaagggatggttccattgatataagagctagttctggagacctttcaaggctttcgagtaatgcagattcacttggtcccactgcttctcaagatataagaaaagatgacagcaaacaagaacttcttggtgatggtccttgttatcaaactggagttcttcgtacaaattgcatggattgcctggatcgtacaaacgttgctcagtatgcttacggccttgctgctttgggaaggcagcttcatgcaatgggagcgactaatgtttcaaaaatccacccagatagcagcattgcttcagctttaatggatttgtaccagagcatgggtgatgcacttgctcatcaatatggaggctcagcagcacataacacagttttccctgagaggcaagggaagtggaaggctaccactcagtctcgggagttcctcaaatcaattagacggtattacagcaatgcctatactgatggtgagaaacaagatgccataaatctatttttgggttatttccaacctcaagatggaaagcctgctctctgggaattagactctgattactatcttcatgtgacaacatatggcgatgatcttatatctgatagctaccatatgactgcacctggggaatctggagctgcattgagccctggagccacattgagccctgttccagcatgtaaggaggacttctcaaggatgaaacttacttcatttgacaaacttattgaaaggacttgcagttcaataaggaacgtgcggcttcactgtgatgctgatctgaaacagagcggaactgttggaacttctggaatggccccagatgcagtggagatacagcttagaaccccaaactggttgtttggtcaaagaaaacacgcagagactgtcccaacagtaaaagttattccagtggaaaatgcaaatgagggtaacggggaggacacgaatgtttctctatgtggggaattgaattggctttcgtcagcagatacatgcgaggaggacaatttcagaaggtatcttgcattcacaacagcggacgtagagaatggctggtatggtggaacactgatatatgatcaagatgaaaacagcggggcttataaacattactctgaattttgccagggctcagtcatggatcccctcgagcacgatcccgagaaagaaatgcattatgcggaggccctcagcgtggatattgacatcactgatgatgcaacggtagaagcagaaatgcaagctgccctggacgattaccagataataggttcagacctcagcattattccatcttgtggatcgctcgctgaagatccaagccagctgacgaggtggatcattggtgatgataaactgcaagtcgcacagtag</cdnaseq>|
| |
| − | AA = <aaseq>MTAEADDPTAAETLEKFRLYETRARFYLIGTSREKRWFQVLKID RSERSELNISEDPVWYSQQEVKNLLQRISEGNRSTGGLTFVTKAYGIAGCIKFLESYY LILVTKRCQIGCICGHPIYCIDESQMITIPHSSVQTDVATSKNELRYKKLLASVDLTK DFFYSYTYPIMQSLQQNVTSAGMKEMPYENLFVWNTFLTQPIRSRCRNTLWTVALVHG HFKQVKLSIFGRELNVVLISRRSRHFAGTRYLKRGVNDHGKVANDVETEQIVFEEEAG SWKGRMSAVVQMRGSIPLFWSQEAGRLSPKPDIIVQRYDPTYEATKLHFDDVAQRYGH PIIILNLTKTFEKRPREMMLRREYFNAVGYLNQNVPEEKKLRFIHWDFHKFAKSKSAN VLGVLGGVASEALDLTGFYYSGKPKVQKKRSTQLSRTTTARDGSIDIRASSGDLSRLS SNADSLGPTASQDIRKDDSKQELLGDGPCYQTGVLRTNCMDCLDRTNVAQYAYGLAAL GRQLHAMGATNVSKIHPDSSIASALMDLYQSMGDALAHQYGGSAAHNTVFPERQGKWK ATTQSREFLKSIRRYYSNAYTDGEKQDAINLFLGYFQPQDGKPALWELDSDYYLHVTT YGDDLISDSYHMTAPGESGAALSPGATLSPVPACKEDFSRMKLTSFDKLIERTCSSIR NVRLHCDADLKQSGTVGTSGMAPDAVEIQLRTPNWLFGQRKHAETVPTVKVIPVENAN EGNGEDTNVSLCGELNWLSSADTCEEDNFRRYLAFTTADVENGWYGGTLIYDQDENSG AYKHYSEFCQGSVMDPLEHDPEKEMHYAEALSVDIDITDDATVEAEMQAALDDYQIIG SDLSIIPSCGSLAEDPSQLTRWIIGDDKLQVAQ</aaseq>|
| |
| − | DNA = <dnaseqindica>93..164#278..482#941..1106#1234..1456#2187..2263#2575..2762#3050..3147#3407..3540#3626..3760#4468..4837#5102..5223#5360..5479#5619..5831#5911..6099#6183..6294#6398..6643#gcttcagtgcagcctgcgccatcgtcgtcctcctcctcctttcctctcttctcgcaacccttcctcctcctctcgctcgctcgccggaggcgatgacggcggaggcggacgacccgacggcggcggagacgctggagaagttccgcctctacgagacgcgcgcggtaagccccctcactctctcactgcctctatatctctctctatctaagatgaggatgaggaggaggaggaatcacttgatcgattggggttggggggaaccctggatttgcagaggttctacctgatcgggacgtcgcgggagaagcggtggttccaggtgctcaagatcgaccgctccgagcgctccgagctcaacatcagcgaggaccccgtctggtactcccagcaggaggtcaagaacctcctccagcgcatctccgagggcaaccgctccactggcggcctcaccttcgtcaccaaggcctatggcatcgctggtacttggattttccctctattttgtcggaaattaaaattcaatttggtcctcccatgcggcagtacatcattctattcatcgttattcacttcatgaaattctggatagttttcttccaattagattatcctagctaggaacattgcctacttaatatgccatagtgattattttcgctcccgaagaaagaggcggaaaattgcaaatgcccttattgtctcctgtgtcagtaatgtaatgggttcttactgtaaatctgcaatgacagtagctacctattcacccaaccagatgtcggaagtggttccgaacagaaatgaattggataaaatttgatttaaatgggagataatttagtaacactagatttcttattcatcttgtcgaattcacaagacccggttcctctttccattgttcctcaagctatttctttttgtttcttctgttatgtaggttgcatcaagttcttggagtcatattatctgattttggtcaccaagcgctgccaaattggttgcatttgtgggcatcctatttactgtatagatgagagccagatgataaccattccacactcatctgtgcagacagatgttgcaacctctaagaatgagctaaggtgattcttcctgtgccttctctaacatttcttttttcattcatttcctcatcttttctatgctcctttacagtttcaacttgtgggtactcgtatatatttatttaacttaaggaaatattaacaggtacaagaaacttttggctagtgttgatctcaccaaggatttcttctatagctacacataccccattatgcagagcctgcagcagaatgttacttctgcagggatgaaggaaatgccttatgaaaatttatttgtctggaatactttcctgacacagccgattcggtcaaggtgccgcaatactctctggacagtagcgctggtccatgggcatttcaagcaggttatgtctaacaaacaatccacaatttggttttgccactattcttgtttctggtgtgtacttctgcaaaacagataactcattctatttagagctttacgtactcccttgatcattccaagaatgcgtttgcttcaaaatgcctgggaactgggaatttatctgtagagtcattctagttataatgtggataccagataccgaatacctacttatttaccagagtatattgcattcgaaatgaagcgcttggagctttatccgcaaagtcctactaacttatattcctatttctcatttgttggagtagaatgctaggtgagttgtggtataagaaaaaaggtaccaccacgatttcaattccaaagttcattttcatcagtattttttttaaaaaaaatccaacccataataagaaaaaagtgcaactactatgatgttgtaccaagtctttgttgtcatcatctgtctgttccttactaactgtagctattattacttgaaaactaaaggctttgggagttggaaattgttgcttggttgatgactgatgactgatgagtgttgatactgtagagtacttatttagcttatctatatttctgtcaaaattatatctcccaactttcatctgacctgtgcaaatattcataaataaatatgctacaactatttttgaaattatgcgtactacatactagcataatatattttccatttgattttccaggtcaagctatcaatatttggcagggagctaaatgttgttctcatttctagaagatcacggcattttgcagggacacggtaggttgtatgtgctttaagatttctggaagcccttctatttggcatgtgctcagctcagtccattatgcatacttgcatcctcacccattgaccctttttatttgattgctgttgactaatgacaacttgtgtaagattttgttttcatgaattcatgctttacttttaaatcaacgcttggtgctcctctactatttgtttcctctactttgtgactgaaaccaagaaaaatattgtctatgctttgttagtagtatcttagttttattcaatttgaaattttactacctttctgatgatacctgtaggtatttgaaaagaggcgtgaatgaccatggaaaagttgctaacgatgttgaaactgagcaaatagtctttgaggaggaagctggttcctggaagggaagaatgagtgcagtagtacagatgcggggatcgatccctctcttttggtcgcaggaggctggccgacttagtcctaagcctgatattattggtaaatagagtgtttttttaaaaagaaatatcttatgacatctaacatgaagccaacttacatggtttgattggagaatattcataaatcaattctgtcaaaaaaatattcatatatgaaaaccaaatttcctatctgaccatgcttctattagacctgcatgtccagcaaacactctgaattttaactattagatgcttgttcaatctcctctctgatatgcttctaaaatatgggaatacataaaatttcttgagaaatcttaaatttaatgtacatttctgcagtgcagagatatgatcctacatatgaagcaactaagttacattttgatgatgtcgctcagcgctatgggcatcctatcataatacttaatttaacaaaggtattttctttcttcttgattttgggatctcagcgtgagtattctgttgtccttccatcttaaatatgagactgatgaactgaactgaatagttgatcattgtacatcttaattgttccatttttcctgaataagtctcatttggtcatgatcaatttgtcgaggtacagtgttgtttaatcagttgtttctatatccaacctcttgattttatgtttcaatatattgctcatcaagtttctttgtgctatttgtgtagacttttgagaaaaggccccgagagatgatgctcaggcgtgaatattttaacgcagttggatatcttaatcaaaatgtcccagaggagaagaaattgagattcatccactgggatttccataaatttgcaaaaaggtttacattggttcttcataaattccaaatttgcttgagttagcgtgtgtttcatatgctaatggttctccatctcttttttcagtaagtctgcaaatgttctgggtgttttaggaggtgttgctagtgaagcactggatctcactggattttactacagtggaaagccaaaagttcaaaagaaaaggtcaactcagcttagtagaactaccaccgcaaggtaccaatatttcattaagtttatgagttcatgtaaaataaatctctctctctctctctctctctacctgggtgatttcgatggccaaatataacaaaatttgttttctaccaaattccggtcggttaatgtccggtcggtctgttcttttgccaattgataaaaattgcagtaaattcaaatttgaaattttacagattgagatcacccctcactctgccagtgttttggttgctgcttggattttattctggcattcacacactggtgtcatagttgtggtagtaaaaaggccaacatcagtagctcacaaccagtagtgttagctatgcacagtgcaccttacaagtgttacgaatccagcaatttgatggtattgttgcatggtccaactgtaggtgcgtggtaagttagattttacattgcttgtgtaaagtgagttgtgcagtggtgctaatgtataattcttattgagccaaacattcttttaactaaaaggagaatccaaaaaatagtaactcaatgtaatccttttacacagtgagaactgaagtgtaagcctgccacatgagcttagggtgtcagataatgccatacttgctgtggcgtccaactgtccaaattatgttcaaaattagaagtgcacattttgtgttcaaaatcaatatgttatgagcagacgatatttcccatatttcttttcacagggatggttccattgatataagagctagttctggagacctttcaaggctttcgagtaatgcagattcacttggtcccactgcttctcaagatataagaaaagatgacagcaaacaagaacttcttggtgatggtccttgttatcaaactggagttcttcgtacaaattgcatggattgcctggatcgtacaaacgttgctcagtatgcttacggccttgctgctttgggaaggcagcttcatgcaatgggagcgactaatgtttcaaaaatccacccagatagcagcattgcttcagctttaatggatttgtaccagagcatgggtgatgcacttgctcatcaatatggaggctcagcagcacataacacagtaaataatttttgcctcttgtttttctcttattttgttaacatcaagaggatttctgaatcatttataatggtcataaggcccttataggaaactcccctttggtagtcctgagttgatatagttagtaaacatgtacccctatttgtaactttgggatgaagcattggccaatctcactgacattttttctcttctgtttgtgtctactagtgctcatgaccttccaatgaacttaagtttagtctacttgtttcttttcaggttttccctgagaggcaagggaagtggaaggctaccactcagtctcgggagttcctcaaatcaattagacggtattacagcaatgcctatactgatggtgagaaacaagatgccataaatctgtaagtctctcatttttacctacaatcataaagatcttaagccagcaggatggtggattagctgtcaggatgatttacttctggtaggtgaaatttatgtagctcaactactgtttctttttggtgttattaccagatttttgggttatttccaacctcaagatggaaagcctgctctctgggaattagactctgattactatcttcatgtgacaacatatggcgatgatcttatatctgatagctaccatatgacgtaagttgaaatttggttctatgcttcaatttacataattatttttcggttccttgtgtgaccagatgtagcacttgttttatgccgtaaattgttatgtttattcatgttaaactgacagctcctcaactggaaatagtgcacctggggaatctggagctgcattgagccctggagccacattgagccctgttccagcatgtaaggaggacttctcaaggatgaaacttacttcatttgacaaacttattgaaaggacttgcagttcaataaggaacgtgcggcttcactgtgatgctgatctgaaacagagcggaactgttggaacttctggaatggccccagatgcagtgtatgtctttttctcattcatgcgctcttatgtggaattatcttatcaatgttgtccttacagtttgcctattattcagggagatacagcttagaaccccaaactggttgtttggtcaaagaaaacacgcagagactgtcccaacagtaaaagttattccagtggaaaatgcaaatgagggtaacggggaggacacgaatgtttctctatgtggggaattgaattggctttcgtcagcagatacatgcgaggaggacaatttcagaaggttgtcccagtagtagttcaaacaggtctcgttttagtgtccaccatgtccagctatagtttaattactgttaattcatgcaggtatcttgcattcacaacagcggacgtagagaatggctggtatggtggaacactgatatatgatcaagatgaaaacagcggggcttataaacattactctgaattttgccaggtaagaggcttacatggttcacagatcattgtgaaagactagaatctcatctcatgcttccaaactcataacctcacctgtttatggacatgacaaaatgtagggctcagtcatggatcccctcgagcacgatcccgagaaagaaatgcattatgcggaggccctcagcgtggatattgacatcactgatgatgcaacggtagaagcagaaatgcaagctgccctggacgattaccagataataggttcagacctcagcattattccatcttgtggatcgctcgctgaagatccaagccagctgacgaggtggatcattggtgatgataaactgcaagtcgcacagtagcccttttcttttttttgccaaagggctgtacagatttctacagcagccttgtcattcataaaccagttgcgtagatacgaagctcttaccatacaaaagagctaccccagccggtgtttttatccattttgctgggagcaaccatgcatgcaaataaacattgctggaggcaaggttagctttatttgtacatataggattggagagcataaacatggagggatagcactacttgggagtattaagtgtatgaagcagatcaaagctgtatttttttttgttgaataaactgtatgtgtgtagtcttcatttgttaagatttctggcctgtattttcttgggttggaaaaatgaaatgcattcacaagtggagtggttagttatagttaagacttagtaagagcttgtctccctaaatgacgggggcatgagtcgttgtgcc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001067343.1 RefSeq:Os08g0109100]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 8]]
| |
| − | [[Category:Chromosome 8]]
| |
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Annotated Information
Function
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Expression
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Structured Information
