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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 8]] |
| − | GeneName = Os08g0509100|
| |
| − | Description = Similar to Lipoxygenase, chloroplast precursor (EC 1.13.11.12)|
| |
| − | Version = NM_001068735.1 GI:115477207 GeneID:4345994|
| |
| − | Length = 9002 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os08g0509100, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 8|Chromosome 8]]|
| |
| − | AP = Chromosome 8:25329042..25338043|
| |
| − | CDS = 25329188..25329617,25333774..25334066,25335250..25335490,25335770..25336102,25336187..25336272<br>,25336380..25337822|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008401:25329042..25338043
| |
| − | source=RiceChromosome08
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008401:25329042..25338043
| |
| − | source=RiceChromosome08
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atgctgcgtccccagctcaatccatcgtccagccaccaccatacgacgacgacgagcagcagcagcagcacgcagctgtacttcgcctcctcgtcgtgcatcgctagccttcgccggccgtcgccgccgtcgctgatcgccggtgccggctgccggacgacgcggcggagacagcagggtaggcagcgagttgttgtgaggtgcgcgtcctcgtcggcggcatcatcggcgtcggaggcggcgagaagagggaccggtagttcggacatggcgccggcggcggtggtgaaggtgaaggcggtggcgacgatcaaggtcaccgtcgaagggcttctcaacagcctgaggccgtcgaaggcgatcgacaacatcagggatctcatcggaaggtcgctcttcctcgagctcgtcagctccgagcttgaagcgaagacagggaagaagaaggcaacggtgcatagctacgcgcacaaggtggacgacgacgaccatggcgtcgtcacctacgaggccgacttcgacgtgccgaccggcttcggccccatcggcgccgtcgtggtcaccaacgagctcgggcaggagatgttcctcgaggacctcaacctcaccgccggcgatggcgccggcaactccaccgtcctccccatccgctgcaactcctgggtccagcccaagtccagcatcgacgagggcacgcctggcaagcgcatcttcttcgccaaggcttatctgccgggccaaactccggcgggtctccggagctaccgggaggaggacctcaagcagaagcgcggcaatggcgctggccagagggaggccgacgaccgcgtctacgactacgacgtgtacaacgacctcggcaaccccgacagcaacggtgacctcgcccgccccgtcctcggcggcagcaagcagttcccttaccctcgccgctgccgcactggtcgccccccttccaagaaagacccgaagtcggagacgaggaaggggaacgtgtacgtgccgagggacgaggagttctcggaggtgaagaacgcgcagttcttgctcaagacgctgcagtcggtgctccacgccgccgtgccggcggcgcagtcggcgctcatcgacaatctgagcctgaacctgccgttcccgtccttcttcgtcatcgacaagctgttcgaggacggcgtcgagcttcccggcgtcgagaagctcggcttcctccacagcatcgtgccccgcctgctcgagctcctccgcgacagccccggcgacaagatcctcctcttcgacactccggccaacgtccaaaaggacaagttcgcatggctcagagatgaggagttcgcgagggagacgctcgctggcatcaacccgtacgccatcgagctcgtcagggaatttccgctaaagagcaagctcgacccggcggtgtacggtccggcggagtcggcgatcaccgccgatttgctggaggagcagatgaggcgcgtgatgacggtggaggaggcgatcagccagaagaggctgttcatgctcgacttccatgacctcttcttgccgtacgtgcacaagatccggtcgctgaagcacaccaccatgtacggctcgcgcaccatcttcttcctcaccgacgacggcacgctgcggctgctcgccatcgagctcacccggccggcctcgccgtcgcagccgcagtggcggcaggtgttcaccccgtccacggacaccaccaagtcgtggctgtggcggatggccaaggcccacgtccgcgcccacgacgccggccaccacgagctcatcacccactggcttcgcacgcactgcgcggtggagccgtacatcatcgcggcgaaccggcagctcagcgagatgcaccccatctaccagctgctgcacccgcacttccggtacacgatgcggatcaacgcgctcgcgcgctccaggctgatcagcgccgccggcatcatcgagctctcgttttcgccgcagaagtactccatggagctcagctccgtcgcctacgacaagctctggcgcttcgacatggaggcgctccccgccgacctcgtccgccgcggcatggccgaggaggaccccacggcggagcacggcctcaggctcgccatcgaggactacccgttcgccaacgacggcctcctcatctgggacgccatcaagacctgggtccaggcgtacgtcgcgcggttctaccccgacgccgacagcgtcgccggcgacgaggagctccaggcgttctggaccgaggtgcgcaccaaggggcacggcgacaagaaggacgccccgtggtggccgaagttggactcgccggagagcctcgcccacacgctgaccaccatcgtctgggtcgcggcggcgcaccacgccgccgtcaacttcgggcagtacgacttcggcggctacttccccaaccggccgtccatcgcgcgcacggtcatgccggtggaggagcccgtggacggcgccgccatggagaggttcctggacaacccggaccaggcgctccgcgagtgcttcccgtcgcaggtgcaggcaacggtggtgatggcggtgctcgacgtgctgtccacccactccaccgacgaggagtacctcggcggcgagcagacgaggccgtggaacagcgacgcggcggtgcaggcggcgtacgctgggttcacagctcggctcaaggagatcgagggcgtcatcgacggccggaacaaggacaggaagctcaagaatcggtgcggcgccggcatcctgccgtatcagctgatgaagcccttctccgacgccggcgtcaccggcatgggcatccccaacagcacatccatctga</cdnaseq>|
| |
| − | AA = <aaseq>MLRPQLNPSSSHHHTTTTSSSSSTQLYFASSSCIASLRRPSPPS LIAGAGCRTTRRRQQGRQRVVVRCASSSAASSASEAARRGTGSSDMAPAAVVKVKAVA TIKVTVEGLLNSLRPSKAIDNIRDLIGRSLFLELVSSELEAKTGKKKATVHSYAHKVD DDDHGVVTYEADFDVPTGFGPIGAVVVTNELGQEMFLEDLNLTAGDGAGNSTVLPIRC NSWVQPKSSIDEGTPGKRIFFAKAYLPGQTPAGLRSYREEDLKQKRGNGAGQREADDR VYDYDVYNDLGNPDSNGDLARPVLGGSKQFPYPRRCRTGRPPSKKDPKSETRKGNVYV PRDEEFSEVKNAQFLLKTLQSVLHAAVPAAQSALIDNLSLNLPFPSFFVIDKLFEDGV ELPGVEKLGFLHSIVPRLLELLRDSPGDKILLFDTPANVQKDKFAWLRDEEFARETLA GINPYAIELVREFPLKSKLDPAVYGPAESAITADLLEEQMRRVMTVEEAISQKRLFML DFHDLFLPYVHKIRSLKHTTMYGSRTIFFLTDDGTLRLLAIELTRPASPSQPQWRQVF TPSTDTTKSWLWRMAKAHVRAHDAGHHELITHWLRTHCAVEPYIIAANRQLSEMHPIY QLLHPHFRYTMRINALARSRLISAAGIIELSFSPQKYSMELSSVAYDKLWRFDMEALP ADLVRRGMAEEDPTAEHGLRLAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVA GDEELQAFWTEVRTKGHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQY DFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPSQVQATVVMAVLDV LSTHSTDEEYLGGEQTRPWNSDAAVQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGA GILPYQLMKPFSDAGVTGMGIPNSTSI</aaseq>|
| |
| − | DNA = <dnaseqindica>147..576#4733..5025#6209..6449#6729..7061#7146..7231#7339..8781#ggctgcctcaccttacctcgatctgcaagcaagccaagccaagcataggtagacgacgtgtagatacgtagtcctcctcctctctctcgattctgcacgcctcgtcgagcagctagctagcatatatacccccatacctgcataccatgctgcgtccccagctcaatccatcgtccagccaccaccatacgacgacgacgagcagcagcagcagcacgcagctgtacttcgcctcctcgtcgtgcatcgctagccttcgccggccgtcgccgccgtcgctgatcgccggtgccggctgccggacgacgcggcggagacagcagggtaggcagcgagttgttgtgaggtgcgcgtcctcgtcggcggcatcatcggcgtcggaggcggcgagaagagggaccggtagttcggacatggcgccggcggcggtggtgaaggtgaaggcggtggcgacgatcaaggtcaccgtcgaagggcttctcaacagcctgaggccgtcgaaggcgatcgacaacatcagggatctcatcggaaggtcgctcttcctcgagctcgtcagctccgagcttgaagcgagtaagctaattaattgttttttttctgtttattaattggatggatttatgcatattcctgcatgcatgcaagtttatcatccatgcatatactattcctacatgatttgcatagttttttatgcttattttggttcgaagatctcatgtgtgggctagatataataggattgttgagcatgttaattaggcatatgcatggtagagactaaataattaggaagttttgatgacatatccaaggagtacttaggtaggtcatagtactgctcattggaggtcgtcgctctccttaattacattggtcatactcgtgattagttaaagcagccttatgggaattaaggcgttgacgactatatcttgattaattactccaaacaaacaagttaataatgtgaaaatcaattaatctagaaactatggagaagatgcctcctcctccctttgatttcttcactcattaatgtcctagtatggatacaaatttctaattattactccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtcttattaaaaaaatttatgaaatatgtaaaactatatgtgtacatgaaagtatatttaacaatgaatcaaatgatatgaaaaaaaattaataattacttaaattttttgaataagacgaatggtcaaacacgtactaaaaagtcaacggtatcaaatattttgaaacggagggattattattattatttcagcaggacctctgctagctatgcattaaaggtattaagcaaagaaatggtgatggaaaaaaaggttataaggcttgacaactgatctaagctgatgactacacacagcaactacttttttttggataaattaatacagcaactactatttggaagtaaaaattacaaagaaagaaaaccaaatggcatgtactctagctattccagtgattaattgattgacagatcctccttgatgcagtaacttatttgatcattaacttctaaaaaaaagtagtagagcgaccaagttggtaacaaccctttttaactactatagttcattatctactagtagcacatagctagctagctagcactagcagcagtaacaaaccctcggttcaccaactgatcgatcgatcatcctcaaaagttagaattgttttgcttgcaggcctcacacagttgacaatattgatttcttttttcatgagctagcacgatttaattacctataatcttgtacagatatatcggcagaaagcacttgggtggtgtacattatcccctatgcgtacgtgacatcgacagttaattaggccctatcactgtcataccatgaggttcagaggatatatcaccttaacacctgatgtgcacagtcactagctaaatatataattagctatttagctttactcacaccccaagtgcaattaattcaaccaatggtgtcatatatagcagagagctacataagatatgagcaaggcttgaagcaaaatcaacctattaatcccctctcctattctcttccactctctccggttttataatttttaacattttaaaacaaagttgaggtcaaattattaattaaaactttgactatcaataactataaaaatatttagtttaaaaacactaaaccaacagatatagatttatcttacaaagtattataataaaagtaaaaatatttatctattgtatatatcataatagaaaaacatagtcaatgatatattttgaagaccgtgtcattatccaaaatgtcaagatttatgaaaccagagagagtattgttctacacaaaggccaatatatttaattaaaatagattggtcgaccaaattaaacacgacatgtaaatgttttcaaccacaagctatatagctatctgatcaatatgtttaccacccgtcgaaaaataagctagcgacgacatttgcatctctttccgtgttgatctgtagcaatttgcatatataactgtccttgctaatttgtcacacactagcggtagtattcattccgtgctagcaagctaataggtcgaccgatagacatcacacacgtttttttgtacttaactgttggagaaaaaagatgcccaaattttgttttggctatctagctaggcacgtgatttcgaccgatcaagatttgactttgttctgatcgtacagagcagtctaaattgacaaaatttacacgtactgagtatataagtcatagaaaaaaatggtttggacaaggtaccctataaaattactgataatcaattcaagatttgttgaaggctatgtcaaaaaatatattatgtggcatttggatctcatcaagtacttatttttcaagctcgcaatttttacggtggcccctctagtggtattataattctatacgtcctgttttttttctcgaccaatatatctatttatatactaccacttattaactaatcggaaaagaattattgtttctactgatagtaaaactaataaattaatggttgtgtattgtttctacactaataaattagctatagtaccatatattaccgtagagatcacttgactatagcttttctaaagtcaaatccggaataaattccattgtcttgaaaaactagtagagactaccgatgtgtttctttctggtctcctcaatattcatttgcataagtttttttttatatgttaggtgcatatctatcgatgcacgactattaattcatgacaataattaatcgacggcagtttggcacgatgcatctgtagtcatatccatgtgcttcaaatttgatcttaaatttggcttgggtaactactcggtatattgttcatggtggccagacagtgccggtcagccgttgcatctcgcgtatatagtacatgtgatagcgattcttttggccaaatattacgcgaaggatctaagaagatcacatctgaatagatatgtacgataattattgctagtgacatgtatacgattcagaaccgcacatgcatgttcatacttcaatttgtatatactcctaattagcatttgtgtaccttaggatgcctgggagaatacgctgttaatttcaggcaataatatataatactcctatatactagtaatatgcatggaattctggttgcgttccaaacttccaattctaagtatactattcctagttgaacaaatttttattcaagtagaaaggagccgtgtgctatagctagctaattcactcagtagactaactgaagattaaaaagttctaatctgcgagaatctgtccaggagttacatatcctaatatcctagtggacattccaatctaattagaagagagaccagcacgtcctaatcacctatggtcaagaaaaagtctcacatctgacttcattgtcgttgaaaacacttctttagaaatctagtacaaagctaaagctattgtacatgacgttttagctaaggcattgacgtagtcttcgatgcatgcacacctttagtattttttttctttctgattatactcactatgtttctaaatatttcacacagttgactttttaagtatatgtttgatcgttcgtcttattcataaacttttgtgaaatatataaaactatatatgtatacatataagtatatttaacaatgaataggaaaataattactaattatttaaattttttgaataaaacgaacgatcaaatatatttaaaaaaagtcaacggtgtcaaatatttagaaaaggatggagtcattactagtggtgtctctattgggggaaattaattactagctttatgccactttttaaagttactaactggttaatactattccctctgtcaaaaatattatttacgcgataaaagaacataataatacttttgaacatgcatggatctagttgtagtaacgccgattataatttgtcataaagtaattagctattggtctcatcctaataaaacaaaatgcatatcacgtttttcaacagataacgtgattttcagtatagtaagacaaataattaatcgcatgcacaaacatgatagaacatgacgtgcctgatctgacgcaatctgttgcgccttgcgaactataactaattaatcaataaataaattaattatgcagagacagggaagaagaaggcaacggtgcatagctacgcgcacaaggtggacgacgacgaccatggcgtcgtcacctacgaggccgacttcgacgtgccgaccggcttcggccccatcggcgccgtcgtggtcaccaacgagctcgggcaggagatgttcctcgaggacctcaacctcaccgccggcgatggcgccggcaactccaccgtcctccccatccgctgcaactcctgggtccagcccaagtccagcatcgacgagggcacgcctggcaagcgcatcttcttcgccaaggtatatagttaaaatatcttttttaaaaaaattgtcttcttctacaaaagaatatgtagtctagccagctagtggttgcagtgacctaagtagcaccctaagagttcaaatcttcataggagtaaattttagattgggttgtttgctgggctaagttcacaatttaaatggctacatatatctggttggatgtagagaccagataaaaaaaactcttctgaaaaaaaatatagttaaaatgattagaacgtattattaacttattatcaatacacctagatttatagttgcatgtcgtaatcttgaggcaacggttatgcaactgtttactaattttggatggagattcacaaacagaattcaataattgtgtactccttatcttgggttggtaggtgtcttctttttttatgtgagaaactttttattttgtgtgctattctgtaataattggctgtagctcgttgagcaaaggctgggatattctattctattataaaaaaaatacctagatttatagtataaaagaagaagtgaaatgtcgtactccctccatccctaaatgtttgacaccattgacttttttaaacatgtttgaccgttcgtcttattcaaaaaatttaagtaattattatttatttttctatcatttgatttattattaaatattcttttatgtatacatatagttttatatatttcataaaagttttcgaataagacgaacgatcaaacatgtttaaaaaagtcaaaggcgtcaaacatttaggaaataagggagcatataatttgttttcataaaatctgaactgaaacagatgcaaccttggagtacactcctagctatatatatctcacttaaatgtcccgatataacttaatttattcattaattgaagttagcgtggctgatgagcgaccgcggattgcgcttgctctcagtgcatttataatcacgcggttgcttaaatttctcggattttgtataaattcacacgcagcctaaaaacaccaattcgagaaaaatcaatcaccatcgcagtcaaactcaaaaaaaaaaaacaattgaccgccaaatttactgggattgccacccaggtgggccggcccatgggccgtggcccagacagatgggcccaactaactcgagttctgaatttgatgggatgtcgcggtggtgcaggcttatctgccgggccaaactccggcgggtctccggagctaccgggaggaggacctcaagcagaagcgcggcaatggcgctggccagagggaggccgacgaccgcgtctacgactacgacgtgtacaacgacctcggcaaccccgacagcaacggtgacctcgcccgccccgtcctcggcggcagcaagcagttcccttaccctcgccgctgccgcactggtcgccccccttccaagaaaggttcgttaaaaaaaaaaaccaaaaactatcggagagcagaaaattttgagtctaaaattctaaagttcgttttttggattctacgactacaatttatcagaatctatataaaaaactaactatttgaggagcttctgattctaaaaaagctgcagcttcgtgaaactcttcaaacatgatcaaacacatcatccttgtcatctccgatgaccgatcacggtcgtcgttctcatctccggcgagactgatcacggtggggttttgtgatggatcatgcagacccgaagtcggagacgaggaaggggaacgtgtacgtgccgagggacgaggagttctcggaggtgaagaacgcgcagttcttgctcaagacgctgcagtcggtgctccacgccgccgtgccggcggcgcagtcggcgctcatcgacaatctgagcctgaacctgccgttcccgtccttcttcgtcatcgacaagctgttcgaggacggcgtcgagcttcccggcgtcgagaagctcggcttcctccacagcatcgtgccccgcctgctcgagctcctccgcgacagccccggcgacaagatcctcctcttcgacactccggccaacgtccaaagtacgcatcgatctatcgaacagcttcacctccatcgccattgattccaagtttctaatggttcttgctttgtcttacctgcagaggacaagttcgcatggctcagagatgaggagttcgcgagggagacgctcgctggcatcaacccgtacgccatcgagctcgtcagggtgagtcctcatgtcaacaattcagagattttgattcggattttagataaagtttgtcaatgttgtgctggttttgatttggtttgatttttgctctgtgagtgcaggaatttccgctaaagagcaagctcgacccggcggtgtacggtccggcggagtcggcgatcaccgccgatttgctggaggagcagatgaggcgcgtgatgacggtggaggaggcgatcagccagaagaggctgttcatgctcgacttccatgacctcttcttgccgtacgtgcacaagatccggtcgctgaagcacaccaccatgtacggctcgcgcaccatcttcttcctcaccgacgacggcacgctgcggctgctcgccatcgagctcacccggccggcctcgccgtcgcagccgcagtggcggcaggtgttcaccccgtccacggacaccaccaagtcgtggctgtggcggatggccaaggcccacgtccgcgcccacgacgccggccaccacgagctcatcacccactggcttcgcacgcactgcgcggtggagccgtacatcatcgcggcgaaccggcagctcagcgagatgcaccccatctaccagctgctgcacccgcacttccggtacacgatgcggatcaacgcgctcgcgcgctccaggctgatcagcgccgccggcatcatcgagctctcgttttcgccgcagaagtactccatggagctcagctccgtcgcctacgacaagctctggcgcttcgacatggaggcgctccccgccgacctcgtccgccgcggcatggccgaggaggaccccacggcggagcacggcctcaggctcgccatcgaggactacccgttcgccaacgacggcctcctcatctgggacgccatcaagacctgggtccaggcgtacgtcgcgcggttctaccccgacgccgacagcgtcgccggcgacgaggagctccaggcgttctggaccgaggtgcgcaccaaggggcacggcgacaagaaggacgccccgtggtggccgaagttggactcgccggagagcctcgcccacacgctgaccaccatcgtctgggtcgcggcggcgcaccacgccgccgtcaacttcgggcagtacgacttcggcggctacttccccaaccggccgtccatcgcgcgcacggtcatgccggtggaggagcccgtggacggcgccgccatggagaggttcctggacaacccggaccaggcgctccgcgagtgcttcccgtcgcaggtgcaggcaacggtggtgatggcggtgctcgacgtgctgtccacccactccaccgacgaggagtacctcggcggcgagcagacgaggccgtggaacagcgacgcggcggtgcaggcggcgtacgctgggttcacagctcggctcaaggagatcgagggcgtcatcgacggccggaacaaggacaggaagctcaagaatcggtgcggcgccggcatcctgccgtatcagctgatgaagcccttctccgacgccggcgtcaccggcatgggcatccccaacagcacatccatctgatgggaggacatctacttgcaattgatcgttcatgtcatcatgtgtgtgaagctctgaattatttgtgtcagtagtagcattgttacataatttttaatctgcatatatttgtctgtaaaaataagaagtggttgttgttgatgttatttattgaaaatcttatgaataatgtattcttttatttgatttatttgcagaaacaattgatagcatttacattg</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001068735.1 RefSeq:Os08g0509100]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 8]]
| |
| − | [[Category:Chromosome 8]]
| |
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Annotated Information
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Structured Information
