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| Line 20: |
Line 20: |
| | | | |
| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]] |
| − | GeneName = Os09g0252800|
| |
| − | Description = Similar to E3 ubiquitin protein ligase URE-B1 (EC 6.3.2.-) (Upstream regulatory element binding protein 1) (Fragment)|
| |
| − | Version = NM_001069222.1 GI:115478183 GeneID:4346522|
| |
| − | Length = 7440 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os09g0252800, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
| |
| − | AP = Chromosome 9:4592240..4599679|
| |
| − | CDS = 4592241..4593479,4593565..4593882,4594465..4594663,4594837..4595102,4595188..4595474<br>,4596614..4597718,4597800..4597946,4598046..4598126,4598215..4598440<br>,4598522..4598661,4599439..4599545,4599639..4599679|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008402:4592240..4599679
| |
| − | source=RiceChromosome09
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008402:4592240..4599679
| |
| − | source=RiceChromosome09
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>tcagatattcctttttacatgttagatgctgggttgccacctgaaacttctgctccggtttttggcgagcgtgttgtaagtactgctcccccacctttgattgatttctctcttggtatggaatctctccgaattaggcggggccttggagataatttatggactgatgatggtcaacctcaggcaggtaatcatgcagctgctgttgcccaggctttggagcatcattttattacagagttgaatgtgtctacttttctaaataatgcaattccatacactggcaatcgtgtgcttgatatgcaacctgaccaaactggcgatgatgtagatgacgatttaccatcacaggatgatgacatatcagaacatgtgacaactgattcccctgctttgcctactagtagccctcaacaatttggaactaccaaccaagcaaacggtaatgtctgtcctatgaatgatctaatttgtcaacagtcagctgatgttgcagatgttcgtactgaagaagagatgcatcaaatagctgatgacatgaatgttatacctcagagtaatgaggatactgctgacagacagcatgttgctcatcctgatagggactcactgtctggtaatctgcaaagttatgatcatgttatgcaggatgaggtagaaatacctcaacgtggccagattggtaatgatattagggacccatctgatctggagtcaagttgtcatgctcttctcacttccacaagtgcagctcctgagctgagcgatgctcatgttgattccaccactatgaatacagatgttgacatgaatagcattgatatttctgagaaccaagtagaaaactcagctcctggtttgtatggcaatgttgtttctgttaggctagacgaaggagctcctcaagagactatgcagcctgatcaattgaatgctaacaatgaggcatctagtacaaatgaaatcgatccaacatttcttgaagcattgcctgaggatctccgtgcggaagtccttgcttctcaacagaatcgcgctgcaccaactgcttcctatactccaccagctgcagtagaaatagatcctgaatttttggctgctctccccccagaaatacaagctgaggttttggctcagcagcgagcacagcggatcgctcattctcaacccattgggcagccagttgacatggataatgcttcgattatagcaactttcccccctgatctacgcgaagaggtgcttttgacctcgtcagaggcagttttgtctgccttaccttcagctttacttgctgaagctcaaatgcttcgcgacagagagttgagtcgttaccgtgctaggggaagcctttttggaggaagttacaggcttggagcgaggaggttaccaacagacaatcagactgctgttatggacaggggtgttggtgtgactgttggtaggcgggttatttctactgtgtcggcaggcgctaagggtaaagatgtggaagggaccccacttttggattctagcgctctaaaagcacttattcgtcttctgcagctagctccgccactcagcaaaggccttcttcaaaggcttatgttcaatctttgcgcgcacagtgttacgcgtgctacattgattggccatttactcaacattattaaacctgaagctgaggggcttaatggatgggactgcatgactacatataggttacatggatgtcagtggaacattgtttatgcacaaccacaatctgcaaatggtctacctccgctggtgacaagacgacttcttgaagtgcttacataccttgcttcaaaccatccatctgttgcaggtctcttggtctactttgacccttcaacaagttcaaactgtatgatcctaaagcatggtaaagaattatctcaagaagggctacaatcggatatgatgaaaacgtcatctgagggttatacccctatcctgctattccttaagctcttaaacaagccgttgtttctacgaagtcgagtatatcttgagcaggtgatgtgtttgcttgaagtagtggtcagcaatgctgcttccaaagtcgattatccacctcattcagggcaaatggttagcacttctgtggatgaaaacagggcaccgattgaaacacatggagaaccatctactatggagcaagttcctatccaagaaaatagtcaaaataaagatgtggtggtgccagcatcaggtccccaacagtctattaatgtgcatgacattcttactcaacttccagactctgaattacataatctgtgcaatattcttgcacttgagggtcttccggataaagtctatacgcttgctgcggaggtggtaaaaaaattggctagtgtggcggtatcccaccggaaattcttctctatggagctagccagtgctgctcagagcttaagttcttcagcagtagaggagcttgtaacattgaagaacacacaaatgcttgggctcaattcttgttctatggctggggctgccatcctgcgggtcttacaggtcctatctacattgacctcagatatgagtggtaatagccaggatcaggctgtgggacaggaagaacagtctattttgtgggatttgaatatatcacttgagcctttgtggcaagaactaagtgactgtataagcactacagaggcaaaacttgttcataattcaagtttcaatccccaggttcctttgatggatgcaatagaagttggtgcctcatcctctacttccccacctcttcctccaggcacacaacgccttttgccatttatagaatccttttttgttctgtgtgagaagcttcaaacaagccaagcagttgtgccatctgattccaatgtgactgctacagaagtgaaagaacttgctgggagttcatcgtccccatcactaaagactggtggagtatgcaatattacttttgtaagggtggcagaaaaacatcggcgcctcctcaatgtgttcattcgacagaatccaagtttgctagaaaagtcactttctatgatgttgaaagtaccaaggctgatagactttgacaacaagcgtgcttactttagatcacgcattaggcagcaacatgatcagcatctttctgctcctttgcggattagcgttcgtcgggcatatgttttggaggattcatacaatcagttgaggttacgtcgtagccaggatcttaagggccgcttgactgtgcaattccaaggagaggaggggattgatgctggtggactaactagggagtggtatcaacttctatctagagttatttttgacaaaggagctctgctcttcaccactgttgggaacaatgcaactttccagcctaaccccaactcagtttatcaaacagagcacctttcctatttcaagtttgttggtcgagtggttgccaaagccttatttgatggccaattattggatgttcactttacccgttcattttacaaacacatacttggtgttaaagtgacttatcatgatatagaggctgttgatcctgattactacaaaaatttgaagtggatgctagagaatgatgtaagtgatattcctgacctgacattcagcatggaccctgatgaagaaaaacatattctttatgagaaaaatgaggttactgattatgagctcaaacctggtgggagaaacatcagggtcactgaagaaacaaaacatgagtatgtcgatcttgtggctgaacatatattgaccacagcaattcgccctcaaattaatgctttccttgaaggattcacagaattagttccaagggagctcatttccctatttcatgataaagaacttgaactcttgatcagtggacttcctgaaatcgactttgatgacctgaaagcaaatgcggagtatattgggtattcgcctgcatctccggtcatcctgtggttctgggaagtagttaatggtttcagcaaggaggacatggcaagatttctacaatttgtgacaggaacatcaaaagtaccattagaaggtttcaaagcgctacaaggtatttctggtcctcagagattccagattcacaaggcttatggagctccagagaggcttccatctgcccatacttgctttaatcaactggatttaccagagtattcctcaaaggagc</cdnaseq>|
| |
| − | AA = <aaseq>SDIPFYMLDAGLPPETSAPVFGERVVSTAPPPLIDFSLGMESLR IRRGLGDNLWTDDGQPQAGNHAAAVAQALEHHFITELNVSTFLNNAIPYTGNRVLDMQ PDQTGDDVDDDLPSQDDDISEHVTTDSPALPTSSPQQFGTTNQANGNVCPMNDLICQQ SADVADVRTEEEMHQIADDMNVIPQSNEDTADRQHVAHPDRDSLSGNLQSYDHVMQDE VEIPQRGQIGNDIRDPSDLESSCHALLTSTSAAPELSDAHVDSTTMNTDVDMNSIDIS ENQVENSAPGLYGNVVSVRLDEGAPQETMQPDQLNANNEASSTNEIDPTFLEALPEDL RAEVLASQQNRAAPTASYTPPAAVEIDPEFLAALPPEIQAEVLAQQRAQRIAHSQPIG QPVDMDNASIIATFPPDLREEVLLTSSEAVLSALPSALLAEAQMLRDRELSRYRARGS LFGGSYRLGARRLPTDNQTAVMDRGVGVTVGRRVISTVSAGAKGKDVEGTPLLDSSAL KALIRLLQLAPPLSKGLLQRLMFNLCAHSVTRATLIGHLLNIIKPEAEGLNGWDCMTT YRLHGCQWNIVYAQPQSANGLPPLVTRRLLEVLTYLASNHPSVAGLLVYFDPSTSSNC MILKHGKELSQEGLQSDMMKTSSEGYTPILLFLKLLNKPLFLRSRVYLEQVMCLLEVV VSNAASKVDYPPHSGQMVSTSVDENRAPIETHGEPSTMEQVPIQENSQNKDVVVPASG PQQSINVHDILTQLPDSELHNLCNILALEGLPDKVYTLAAEVVKKLASVAVSHRKFFS MELASAAQSLSSSAVEELVTLKNTQMLGLNSCSMAGAAILRVLQVLSTLTSDMSGNSQ DQAVGQEEQSILWDLNISLEPLWQELSDCISTTEAKLVHNSSFNPQVPLMDAIEVGAS SSTSPPLPPGTQRLLPFIESFFVLCEKLQTSQAVVPSDSNVTATEVKELAGSSSSPSL KTGGVCNITFVRVAEKHRRLLNVFIRQNPSLLEKSLSMMLKVPRLIDFDNKRAYFRSR IRQQHDQHLSAPLRISVRRAYVLEDSYNQLRLRRSQDLKGRLTVQFQGEEGIDAGGLT REWYQLLSRVIFDKGALLFTTVGNNATFQPNPNSVYQTEHLSYFKFVGRVVAKALFDG QLLDVHFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDPDE EKHILYEKNEVTDYELKPGGRNIRVTEETKHEYVDLVAEHILTTAIRPQINAFLEGFT ELVPRELISLFHDKELELLISGLPEIDFDDLKANAEYIGYSPASPVILWFWEVVNGFS KEDMARFLQFVTGTSKVPLEGFKALQGISGPQRFQIHKAYGAPERLPSAHTCFNQLDL PEYSSKE</aaseq>|
| |
| − | DNA = <dnaseqindica>2..1240#1326..1643#2226..2424#2598..2863#2949..3235#4375..5479#5561..5707#5807..5887#5976..6201#6283..6422#7200..7306#7400..7440#ttcagatattcctttttacatgttagatgctgggttgccacctgaaacttctgctccggtttttggcgagcgtgttgtaagtactgctcccccacctttgattgatttctctcttggtatggaatctctccgaattaggcggggccttggagataatttatggactgatgatggtcaacctcaggcaggtaatcatgcagctgctgttgcccaggctttggagcatcattttattacagagttgaatgtgtctacttttctaaataatgcaattccatacactggcaatcgtgtgcttgatatgcaacctgaccaaactggcgatgatgtagatgacgatttaccatcacaggatgatgacatatcagaacatgtgacaactgattcccctgctttgcctactagtagccctcaacaatttggaactaccaaccaagcaaacggtaatgtctgtcctatgaatgatctaatttgtcaacagtcagctgatgttgcagatgttcgtactgaagaagagatgcatcaaatagctgatgacatgaatgttatacctcagagtaatgaggatactgctgacagacagcatgttgctcatcctgatagggactcactgtctggtaatctgcaaagttatgatcatgttatgcaggatgaggtagaaatacctcaacgtggccagattggtaatgatattagggacccatctgatctggagtcaagttgtcatgctcttctcacttccacaagtgcagctcctgagctgagcgatgctcatgttgattccaccactatgaatacagatgttgacatgaatagcattgatatttctgagaaccaagtagaaaactcagctcctggtttgtatggcaatgttgtttctgttaggctagacgaaggagctcctcaagagactatgcagcctgatcaattgaatgctaacaatgaggcatctagtacaaatgaaatcgatccaacatttcttgaagcattgcctgaggatctccgtgcggaagtccttgcttctcaacagaatcgcgctgcaccaactgcttcctatactccaccagctgcagtagaaatagatcctgaatttttggctgctctccccccagaaatacaagctgaggttttggctcagcagcgagcacagcggatcgctcattctcaacccattgggcagccagttgacatggataatgcttcgattatagcaactttcccccctgatctacgcgaagaggtatggtttactcaatttgaagtgtttccactctgctttgtcgtatttgaactttaataatgttgacctatgctacttcattcaggtgcttttgacctcgtcagaggcagttttgtctgccttaccttcagctttacttgctgaagctcaaatgcttcgcgacagagagttgagtcgttaccgtgctaggggaagcctttttggaggaagttacaggcttggagcgaggaggttaccaacagacaatcagactgctgttatggacaggggtgttggtgtgactgttggtaggcgggttatttctactgtgtcggcaggcgctaagggtaaagatgtggaagggaccccacttttggattctagcgctctaaaagcacttattcgtcttctgcagctagctccggtaatttctatattgttctcatattagctgtgaactggtgtctctttttcttaatcatttggacatgatttattctcaacaagttctacattatcctgcttgctttgtcttctgttttctctgcaacatcacatttatgataattgataagagtagatttttcaataagttagtgatgtattcatctaccatctcgcaagatattcacgataataaaagggagatttttttaaaattagtcagtggcgaaagcaagatacacatgccacaagtggtattatcattccttagtagcaaaaataaaaatttcctattgttgcatgtgaattttattttcctaatgagtggcaaaagtgagaagtattttcatgttatgtggcaaaaataaaggtctgtggtggcaaaaacaacatttccctaacaaaaacaggatgttttcttatgcagaaaacatttccctaataagttaagagacaacagtatattgagaattgcccccatacattgtgtgtgttttcttcttttcttttgcagtagcttgttgcatttccagctgttctgttttaacttctctttttgcagccactcagcaaaggccttcttcaaaggcttatgttcaatctttgcgcgcacagtgttacgcgtgctacattgattggccatttactcaacattattaaacctgaagctgaggggcttaatggatgggactgcatgactacatataggttacatggatgtcagtggaacattgtttatgcacaaccacaatctgcaaatggtaatgtttttctctatatatgttgcaattttgattcttggtagttgttttctgaatggttcttgattcttcctataatattctgttttatctttgtcctttttgggttgtttgttatcttattcaatagtgctaccactgtattaataatatactttgctacttctgtacaggtctacctccgctggtgacaagacgacttcttgaagtgcttacataccttgcttcaaaccatccatctgttgcaggtctcttggtctactttgacccttcaacaagttcaaactgtatgatcctaaagcatggtaaagaattatctcaagaagggctacaatcggatatgatgaaaacgtcatctgagggttatacccctatcctgctattccttaagctcttaaacaagccgttgtttctacgaagtcgagtatatcttgagcaggtatttctcggaatttgttatacagagccataggcctagactatttcgtcatataattatccgtaattctgttattttcctttaggtgatgtgtttgcttgaagtagtggtcagcaatgctgcttccaaagtcgattatccacctcattcagggcaaatggttagcacttctgtggatgaaaacagggcaccgattgaaacacatggagaaccatctactatggagcaagttcctatccaagaaaatagtcaaaataaagatgtggtggtgccagcatcaggtccccaacagtctattaatgtgcatgacattcttactcaacttccagactctgaattacataatctgtgcaatattcttgcacttgaggggttagtttttcaccctgccaattatgctagaaaatcgattgctttcaattatgtcagatatgctttgatttctttggtctgaaaattattttccaagggcagtgtgggaatagataatgttttttttcctgatggaaatacaggaagttggttctgtataggtgtataaaattaggccactgaactttcacatacatgaaactatattttgtcactaagaatagctgaattccttaataatggatattagactacctccccgaatataaggataattacataggcaaaatcccttctgtttggggatggaggtagtactagatacaaataaaaaatgatttcagtataggatattgttcattgttcttgtttattgtaatcaaggttccatttgatgacatgtgattgaacattccgctccagaaaatttgatatttttctgttgtttcttttgcaaaatataatagagcagtgttagtgtatgataattatattggttgtctgtcgacacttgttagtactgagttactgactaatctagggattgccatacatggtatgagtaattgagagattttgtttcacaggtatgttactagtagaatacttcctccgtttcataatgtaagtcattctagcatttcccatattcatgttaatgaatcttgtctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaacggagggagtactaggtaatgcacatgtaggtcagttttccttgttttgagcacttcactttgaaaagacatgttgcatcataatattatttattgtccaaatagattggttggatgacagcatggcaccatccagaatcctgatcttgccaagtactcttcctgaaccaaacactgatcttgtaacattctatctgacatttgttgcaagaattgatggtcttggaatataccgtcattcttgaatattaatacaaaacatacctgttatgtattcttaattagtttttctgattgctattttgctgggagtctctttgaagtaacagcttctgaataatttaacaaacttttatctttccatttttctagatgataaacttacattttctttatttgaaatgaaaccagtcttccggataaagtctatacgcttgctgcggaggtggtaaaaaaattggctagtgtggcggtatcccaccggaaattcttctctatggagctagccagtgctgctcagagcttaagttcttcagcagtagaggagcttgtaacattgaagaacacacaaatgcttgggctcaattcttgttctatggctggggctgccatcctgcgggtcttacaggtcctatctacattgacctcagatatgagtggtaatagccaggatcaggctgtgggacaggaagaacagtctattttgtgggatttgaatatatcacttgagcctttgtggcaagaactaagtgactgtataagcactacagaggcaaaacttgttcataattcaagtttcaatccccaggttcctttgatggatgcaatagaagttggtgcctcatcctctacttccccacctcttcctccaggcacacaacgccttttgccatttatagaatccttttttgttctgtgtgagaagcttcaaacaagccaagcagttgtgccatctgattccaatgtgactgctacagaagtgaaagaacttgctgggagttcatcgtccccatcactaaagactggtggagtatgcaatattacttttgtaagggtggcagaaaaacatcggcgcctcctcaatgtgttcattcgacagaatccaagtttgctagaaaagtcactttctatgatgttgaaagtaccaaggctgatagactttgacaacaagcgtgcttactttagatcacgcattaggcagcaacatgatcagcatctttctgctcctttgcggattagcgttcgtcgggcatatgttttggaggattcatacaatcagttgaggttacgtcgtagccaggatcttaagggccgcttgactgtgcaattccaaggagaggaggggattgatgctggtggactaactagggagtggtatcaacttctatctagagttatttttgacaaaggagctctgctcttcaccactgttgggaacaatgcaactttccagcctaaccccaactcagtttatcaaacagagcacctttcctatttcaagtttgttggtcgagtggtaagatttcttgaatgtccttgttgaactatatacatttatctttgtttttgagaccctgttatctgggattttgggcaggttgccaaagccttatttgatggccaattattggatgttcactttacccgttcattttacaaacacatacttggtgttaaagtgacttatcatgatatagaggctgttgatcctgattactacaaaaatttgaagtggatgctagaggtatggtttcaccatccattattttgtgggaataagtcaggtgcatttgtgtgctgttccagaactgaatatatatgtatatatatatttttttaacagaatgatgtaagtgatattcctgacctgacattcagcatggaccctgatgaagaaaaacatattctttatgagaaaaatgaggtagagagatgagtttctattgtttacccaaagcttgtttactgttgacatgtcttatggtctgttacttaatgaatctgtaattcaggttactgattatgagctcaaacctggtgggagaaacatcagggtcactgaagaaacaaaacatgagtatgtcgatcttgtggctgaacatatattgaccacagcaattcgccctcaaattaatgctttccttgaaggattcacagaattagttccaagggagctcatttccctatttcatgataaagaacttgaactcttgatcagtggacttcctgaaatcgactgtaagagcttcatctcagttaaaaatccttacatttatttcttacattcgtcttattattattgttattattatttgtcagttgatgacctgaaagcaaatgcggagtatattgggtattcgcctgcatctccggtcatcctgtggttctgggaagtagttaatggtttcagcaaggaggacatggcaagatttctacaatttgtgacaggaacatcaaaagtaaaaaaaaaaacttcatttgacagttgattttgttatatctatttcattttaaagcatacatcaaggttcatattatttgtttaacatattgtagagattcatttttttggctgaagttagaaacactgcatgtgaatatccagtgaagtgttgcattcgatgttttttattcacttgtatattttacatatagttgatgaattggttgtttgtttttctgttaaaattagttgtttaaattatttggaaaaggtcaccctgaaattttgcattcattttcctcctgaactaagaaacattgcaatttacagctttaaactctgaaacccctttttacgaaacaaaccctgagccctgaatgaattttgttttacattgatgtggcagtggttttgatagtcattgctgatgtgatatcataattagaatcctctgttcgtcccactgtctcttcctagtttagtgtcctctatcaaaatatttttgttaggtgtaaaaactaccgggaaacctcatatactgttaattgttgtgttgtccagtgtacattgattgtagggtaaactagttggcctacttgaaagtttggagtatataactattccgtttactagcagtttcccttgctgtattaataagatgggtttctcttcatgtcaagtaagatgcaagttgactatagagctagatattctggtaaaacatacgaatccttatgtgatttgctatgttaagaacttaagattggtttctcttcatgtgatggtgttgcaggtaccattagaaggtttcaaagcgctacaaggtatttctggtcctcagagattccagattcacaaggcttatggagctccagagaggcttccatctgcccatacttggtaatatttatatttttcaatcactgactagaacactcattatgtaactgtttatgctgtttcaatgatgctcatttcatacataatgtgcagctttaatcaactggatttaccagagtattcctcaaaggagc</dnaseqindica>|
| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001069222.1 RefSeq:Os09g0252800]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 9]]
| |
| − | [[Category:Chromosome 9]]
| |
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Annotated Information
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Structured Information
