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| Line 20: |
Line 20: |
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| | ==Structured Information== | | ==Structured Information== |
| − | {{JaponicaGene|
| + | [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 9]] |
| − | GeneName = Os09g0500600|
| |
| − | Description = Similar to DNA topoisomerase III beta-1 (EC 5.99.1.2). Splice isoform 2|
| |
| − | Version = NM_001070113.2 GI:297609740 GeneID:4347482|
| |
| − | Length = 13764 bp|
| |
| − | Definition = Oryza sativa Japonica Group Os09g0500600, complete gene.|
| |
| − | Source = Oryza sativa Japonica Group
| |
| − | | |
| − | ORGANISM Oryza sativa Japonica Group
| |
| − | Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
| |
| − | Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
| |
| − | clade; Ehrhartoideae; Oryzeae; Oryza.
| |
| − | |
| |
| − | Chromosome = [[:category:Japonica Chromosome 9|Chromosome 9]]|
| |
| − | AP = Chromosome 9:20022898..20036661|
| |
| − | CDS = 20023039..20023059,20023199..20023255,20024186..20024289,20030447..20030540,20030972..20031071<br>,20031501..20031744,20031860..20032022,20032102..20032221,20032550..20032629<br>,20033147..20033425,20033603..20033771,20033859..20033987,20034116..20034328<br>,20035030..20035209,20035674..20036321|
| |
| − | GCID = <gbrowseImage1>
| |
| − | name=NC_008402:20022898..20036661
| |
| − | source=RiceChromosome09
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage1>|
| |
| − | GSID = <gbrowseImage2>
| |
| − | name=NC_008402:20022898..20036661
| |
| − | source=RiceChromosome09
| |
| − | preset=GeneLocation
| |
| − | </gbrowseImage2>|
| |
| − | CDNA = <cdnaseq>atggcgcccacggttctgatggtcgcggagaagcccagcatcgcgctctccatcgcctccgccctctccggcggccgcatgtctacaaggaagggaagtacagatgtccatgagtttgatgggatgtttcagggttctcatgcatttttcaaagtgacatcagtcattggacatgtcttgagtgtagattttccacctgcatatcagaattgggaagggactgatccaatggatctatttgtggctccagttctgcgatctgaatgcaaccctaaggctcatatccgcaggcatctagctcaggaagctcgaggctgcacctacttggtactctggcttgattgtgaccgagaaggagaaaacatatgctatgaagtaattgattgcactggaattcctaaaagtgaggttggcagaagaattttccgagccaaattttcgtccgttactgagaaagatataatggatgctatgaataatcttgttttgccaagtaaagatgaggcactagcagttgatgctcgccaagaaattgacttgaaggtaggagtagcatttactcgatttcaaaccagatattttcaaggaaaatatggaaatctcgactcaagagtaatttcgtatggtccatgccaaacacctacacttggattctgtgtacaacgctatcagcagattaccacattcaaaccagagaaattttggtccttgaaaacttatgttatcaaggatggtaatgaaattcagcttgaatgggataggaagaaactttttgattttgatgttactgtaatgttccaaaagatggtggccagtgatggtattttaaaagtaaccgacatatcagtgaaggaagagtgcaaagcccgcccgcctggccttaatacagttaatttgcttaaggttgcatcaagtgcactaggtattggacctcagacagcaatgcacttggcagaaaggctttatacccaaggattcatcagttatccacgtacagagagcactgcctatccttcatcatttgattttagaagtgcactcgctgcacttgcacataatcctttgtggtccaatgatgttcggacgttactggacactgggtttgttaagcccaaacagggtcatgatgctggggaccatcccccaataactccaatgagattggcaacagaagaagctttgggaactgatgcttggaggctgtaccagtacatttgtcagcattttattggcactgtcagtcctgattgtagatatacgaggacttccattgagttcacttcaggtggagagactttccactgtgttggcaaccgggtcacttctaaaggatttacttctattatgccatggctggctgtgagtgagaataatatccctgcatataaaaagggcgatgctgttagcatccataaggttgacatatatgagggtagcaccacacctcctgactaccttagtgagagtgaattgatctctctcatggagaagaatggcataggtacagatgcatcaattcctgtgcatgtaaacaacatctgcgagcgtaattatgttcaggtgaattccggaagaagattagtaccaacacccctgggaactacattgataagagggtatcagtgcattgatgctgatctgtgcttaccagatatccgaaggtttattgagcagcagattactctaattgcaaaaggtgaagctgaccatcttcaagttgtgcagcatgttcttcagcagtttatgaaaaagtactcgtactttgtgaaaaagattgaaaacatggatgctttgttcgaagcacagttttcacctttggctgactctggacgtttactgagcaagtgtggaaaatgtgctcggtatatgaagtacatttccactcagccaatgaggctgtactgtgtaacttgtgaagaggtctactatcttccccagaacggttccattaagctttacaaggaaatcatttgcccccttgatgggtttgagttgctactgttttcaatggttggccctgatgcaaaatccttcccactgtgtcctttttgctacaacagtcctccatttgaaggcatcgacaaactcttcggtgcactcaagcttgatgacactggcaaggttgggaaaggggctggcatgccatgcttcctctgcctgcaccccacatgtaaacaatctatgatcactcaaggagtttgtgcttgtcctgagtgtactggtaccctaattcttgatccagtcagcgcacccaaatggcggctttactgcaatagatgtaactgcattgtcctgctcccacatgccgctcataagatcagtactacagataagaagtgcccaacatgtgagtctactatcatcgaagttgattttaacaagaaaactaccccacttaaggatggagctactttgcatgagggttgcatcttgtgcgatgagctgttgcattcgctcattgagatgaagcatgggaagtcattttttatgaggagaggtagaggaagaggcaggggtagaggtcgagggagaggaagcagtaggggaagacgggggagctcaagacacgatgatcctaagatgagcttcagagatttctga</cdnaseq>|
| |
| − | AA = <aaseq>MAPTVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGMFQ GSHAFFKVTSVIGHVLSVDFPPAYQNWEGTDPMDLFVAPVLRSECNPKAHIRRHLAQE ARGCTYLVLWLDCDREGENICYEVIDCTGIPKSEVGRRIFRAKFSSVTEKDIMDAMNN LVLPSKDEALAVDARQEIDLKVGVAFTRFQTRYFQGKYGNLDSRVISYGPCQTPTLGF CVQRYQQITTFKPEKFWSLKTYVIKDGNEIQLEWDRKKLFDFDVTVMFQKMVASDGIL KVTDISVKEECKARPPGLNTVNLLKVASSALGIGPQTAMHLAERLYTQGFISYPRTES TAYPSSFDFRSALAALAHNPLWSNDVRTLLDTGFVKPKQGHDAGDHPPITPMRLATEE ALGTDAWRLYQYICQHFIGTVSPDCRYTRTSIEFTSGGETFHCVGNRVTSKGFTSIMP WLAVSENNIPAYKKGDAVSIHKVDIYEGSTTPPDYLSESELISLMEKNGIGTDASIPV HVNNICERNYVQVNSGRRLVPTPLGTTLIRGYQCIDADLCLPDIRRFIEQQITLIAKG EADHLQVVQHVLQQFMKKYSYFVKKIENMDALFEAQFSPLADSGRLLSKCGKCARYMK YISTQPMRLYCVTCEEVYYLPQNGSIKLYKEIICPLDGFELLLFSMVGPDAKSFPLCP FCYNSPPFEGIDKLFGALKLDDTGKVGKGAGMPCFLCLHPTCKQSMITQGVCACPECT GTLILDPVSAPKWRLYCNRCNCIVLLPHAAHKISTTDKKCPTCESTIIEVDFNKKTTP LKDGATLHEGCILCDELLHSLIEMKHGKSFFMRRGRGRGRGRGRGRGSSRGRRGSSRH DDPKMSFRDF</aaseq>|
| |
| − | DNA = <dnaseqindica>142..162#302..358#1289..1392#7550..7643#8075..8174#8604..8847#8963..9125#9205..9324#9653..9732#10250..10528#10706..10874#10962..11090#11219..11431#12133..12312#12777..13424#gggggggggggggggggcccaaaacccagcccactaaaaccacactccgatccgaaaccgtcttcgtcttcgtctccggccgcctctccgcctccactcttcctcctcccggcggcgagcttcccctctccgcccgcgcccatggcgcccacggttctgatggtaagcagcaccagccgctccgctcccggcgtaccgcgcggcgttgcggccgccgtcggtggcggccgcagcgacccggggggactctccgctccacacagatgttctcgccctcactctcggatcgccgcttctgcaggtcgcggagaagcccagcatcgcgctctccatcgcctccgccctctccggcggccgcgtaagtcccccactcccgcccgctaaaaccatccgcaacctgtttgattttttttttcgttttcgaattcgaattcggctgtggcttgaacacccgaacgtggattgtttcatagcaggttctaacctgggaactttagctgtgagttgtttatagggcaatggctaggggtttgaggcttttggctggtcgtcgacatcattgcgcggtagggttagttccagggacttggggaattcaaagatggtagacactgagaggattagattcactgacatggtaaaatggtaaatggatttgtcctttatgatgaatatccccgttttcacccaaagacctctgcttaagctagtataaatctattgatgaatgttatgttactacctgatctatccatggcatgaaatcgctatcacccgactgtagattgtttcgccgtagattcacagcgcaagttctgccctagaaactaaagtagtgagatgttattaggacaatggctagggattttcgcttggtagaccgtgggcatcattgccactgtaggggtagcttcagggactgggaaaattcaaggatattatagagctgataggattgggtggactgacatggtaaaattgtacaatgtctttgcctttccctatgatgaatgatcaaatatcccctgcttccaccaaaagacatctgcttaagctagtaaatctatagatgaattttatgtaattatccaatatctctgcggcatgaggtggccatgcattttgggtggttgttgccgatacattatctatatcacgtgggtcagattttaaattgggttgtttgccttagctgttcagaagtatcgcactttcactgctgttgtgcattacacatttcttttctgaggtgaatgtcattgcaaaacctttttcgatgttcatgcagatgtctacaaggaagggaagtacagatgtccatgagtttgatgggatgtttcagggttctcatgcatttttcaaagtgacatcagtcattggacatgtcttgaggtttgtgcatattttctcccattcttctaagtgcctttgtcatgattatatcacgtgatgtgctacttttctgtgcaatcaagaactacatatctcaactattgtacatgcgtattctctatgtaactgtttttacatagaaacagttgaccaatgcataattgcaacttgcaaggttgatatatgatgcaaatgattgattattattccattatagctggataatcaatatagcagacactaatgttttcaatgctgacttcgaatataaaacatgcatttgtcatcatcattatcttgtttggttcatgtgacttgagttctgttccatctctagcttaccccaacttgtttgggactaaaaggctgtcgtttgttggataagtctttgtggtccttggtcgtgattcttctttttgcttttgggtagtttcacctttttcaggacagcatctaccctttagcatatttttcagttgctaggacagctgcggttagtaggacagcagcagttagcatctcctttatgcctcctttatgctttattcagtttggatgccctctaggacagcatcccattcaaatttcgaattttagactaggagggtgcagcaataggctagcagccagctatggctatatatatgtatccaacctccctcgggtaggtatggcttttgtgtttagtcaatgaagaaaaccagaaaattgccccatctcgagtgccatcctcttctcaatgagagtaaccattgaaattctaacatctggtatcagagccacactttcctgtaggctaaacatctcttgttccaccccctcccaagctcggttgagctctcagccagcagcagcaacagcaccggttgctcctccttcccctttcccttccccctctccacgcagcagccccccggaggtgcgccatgtccgacgctcggtctcggcgttcggtcgccttgagcactcggcgtcagcaggacgccgagctcgccgcagtagaagagcgcaggcgagcaacgactcagaccactgcagcagcagcgagggcggccagactggcggcagcggagttggcagcagccagggcggaggcggaggcggaggcgacggaagatgcggcacgtgcggcggaggtagaggttgagaccttgcgcagcagcatcaacggctccatcgccggcgacatcaccgccgacagggagcttgaggagctggcaagaggaagggcacgggagcgagcagagcggtgggcagcagcccacctccacggcggcggcggcggcccaagggaccgcgcgcccgccgacgggaacccagacgggcgcaggcgtgccggcggcagcccggagcccgcacgcggccctcgcaggcagcacggctctctctcccctgaccggcgccatggtcaccacggcgtccagacggtggtcagggactttggtcccggcggtgggtggcctaccctcaccaaaaccaactacatcgagtgggccgcggtgatgagggtgaggctccaggtgcggcacatgtgggaggcagttcggtacggtgacgtcgactacgacgaggatcggcgggcactggatgcccttatcgctgcagtcccgcccgagatgcagttctcgctttcccagaagcggactgccaaggaggcctaggacgccatcgctgcggcacgcatcggcagcgaccgcgcccgcaagtccacactgcaggcactccgcaaggagtgggagaacctggccttcaagccaggtgaggatgttgatgactttgctctccgtctcaacactctcttgcagaaaatggtgcagtacggcgacgacacctacgacgaggagagagctgtcgagaagctcttccgctgcgtccctgagaagtacaggcagatcgctcgctcgattgaatctctgttggacctctccacgatgtcgatcgaggaggcgttaggtcgcctcaaggtcgtcgatggtgatgagccacagcctctctcggggcccatcaccatcggcgggaagctccatctcactcgggagcagtgggaggcctctcagggtgacgggaggaagggggagtcatcttccccgataggcggccgtaagccgcgcaaggcgcggggaggtgtccagctacggtgggcgcgaagacgtgccgagggtggcgcccgcagaggcgcccagggcgttgccaccggcaaccacaagccggcacgagacgacgcctgccgcaactgtggcaagcttggccattgggccaaagactgtcgacagccacgacgtggccaggcccacgtcgcacgggtggaggaagagccggctctgctcctggctcacgcaagcatcgagctacctccagcgacaccggccgcagcggctttcctccaccttgatgagccgaaggtacttgtctccctctgcaacgactccagcaacgacaaggctgatgggtggtacctcgaaaccggcgccacccatcacatgaccggccgacgggagttcttcaccgagttcgactccagcgtccgaggctccgtcaagttcggggacgcctccggcgtggagatcaagggtgttggctccgtcaccttcaccgccaagtccggtgagcacaggctgctcaccggagtctactacatccccgcgttgaggaattctatcatcagcgtgggacagctggatgagaatggctcacgcgtgttggtcgaggacggactcatgaggatttgggatcgctgtcgttgccttcttgccaaggtaaccagaggcactaatcgactctacatcctcagcgcgcaggtcgcacaaccagtttgcctcgccgctcgtcgggacgacgaggcgtggcagtggcacgagcgcttcgggcacctccacttcgaggccctgaagcagctcagtgccaaggagatggtgcgaggcatgccgtgtcttgaccacgtggagcagctctgcgacgtctgcgtggtgacgaagcagcggcggctcccctttccccagcagacgagcttccgagccaaggagcggctcgagctcgtgcacggggacttgtgtggcccaatgacaccggccacaccaggaggacgacgttacttcctgctgctcgtcgacgacctctcccgctacatgtgggtgatggtcctcggcagcaagggagaggctgcggacgccatcaggcatgcgcaggctgctgcagaggcggagtgcggccgcaagctgcgcgtgctgcgcaccgacaacggcggcgaattcacagcggctgaattcgcgtcgtactgcgctgatgagggcattcagcgccactacaccacgccgtacagcccgcagcagaacggcgtcgtcgagcggcgcaaccagacggttgtggggatggctcgggccctcctcaagcagagggggatgccggccatcttctggggggaggcggtggtgacggccgcctacatcctcaaccgctcgcctaccaaggccctcgatggcaggacaccgtacgaggcttggcatgggcgcaagccggcggtctcccacctgcgggtcttcggctgcctcgcgttcgccaaggagcttggccacatcggcaagctcgacgacaggagcaccccaggggtgttcatcggctacgcggagggctcgaaggcctaccgcatcctcgacccggagacacagcgtgtgcgcactgcgcgcgacgttgtgttcgacgaagggcgagggtgggtatgggacaaggcggtggacgatggttcgactccgacgtacgacgacttcaccgtcgagtacgtccacttcgagggagctgggggagtaggcagctcttcttcacctagcgtgtctaccccagcccccgaatctccaccgactccgacaccaacacaccctcgggccacgacttcgactacgacgagctcttcgtcgacacaaccccagccagtgactccacatgctccagcaccaacagccactcctccaagcacgtctactccgacgccagctcgtgttgagcgcagcccggtcgagttcgctactccgctctcccacgacggggagtgcatcgacgcgtaccacgacggcgagcagctacggtaccgtacgatggaggatcttctcggcgaccagccggtgccgggactggtgcctcgcgacctagaggcgcagttgcaccttgcgtgcgacgacggtgagcctcggtcttttgtagaggccgagaaacacacggcatggcgtgccgcgatgcagtcggagatggacgcggttcaggagaaccgcacctgggagcttgctgacctccctcgtggtcaccgcgcgatcacccttaagtgggtgttcaagctgaagagggatgaagccggagccatcgtcaagcacaaggctcgcttggtggcacgcggtttcgtgcagcaggaggggatcgactacgacgatgccttcgctcccgtggcacggatggagtctgtgcgactccttgcgctggctgctcaggaaggctggggcgtccatcacatggacgtcaagtcggcgtttctaaacggcgacttgaaggaggaggtctacgtgcaccagccgccgggatttgtgatccccggcaaggagggcaaggtgctacgcctgcacaaggccctctacggcttgcggcaggcaccgagggcgtggaatgccaagttggattccacgctcaaggggatgggcttcgagcaaagcccgcacgaggcggccatctaccggcggggcaatggaggaaatgccttgctggtgggtgtttacgtcgacgacttggtgatcaccggcaccaaggatgcggaggtcgcggcgttcaaggaggagataaaggccaccttccagatgagtgatctggggcctctctccttctacctggggatcgaagtgcaccaggacaactccgggatcacgcttcgacagaccgcctacgccaagcgcgtcgttgagctggctgggctcaccgattgcaacccagctctcactccgatggagagactgaagctgagccacgacagcacggcggaggaggtagatgctacacagtaccgacgtcttgtggggagccttcgctacctcacccacacacggccggacttggccttctccgtcggctacgtcagtcggttcatgcagcgaccgacgacggagcaccagcaggctgtgaagaggatcatccgctacgttgcggggactctcgaccacggtctctactacccgaggcgtcctggcaaggcacacttcgtcgggtacagcgacagcgaccacgccggcgacatcgacaccagcaagagcacgagcgggattctcttcttcctcggcaagtgcctcgttagctggcagtcggtcaagcagcaggtggtggccctgtccagctgcgaggccgagtacatggcagcctccgccgcttcgacccaggcgctctgacttgctcgactgcttagtgatctcctcggcagagacactggaacggtggtgctcagggtggatagcaagtccgctctggccctggcaaagaaccccgtttttcacgaacggagcaagcacatccgggtgaggtaccacttcatccgaagctacttggaggaagggagcatcaaggcgagctacatcaacaccaaggaccagcttgcggacttgctcaccaagcctcttgggaggatcaagttcctcgagctctgctccaggatcgggatggcccaacttccccacaagacgacgcacaagacttagggggagaatgttggataagtctttgtggtccttggtcgtgattcttctttttgcttttgggtagtttcacctttttcaggacagcatctaccctttagcatatttttcagttgttaggacagctgcggttagtaggacagcagcagttagcatctcctttatgcctcctttatgctttattcagtttggatgccctctaggacagcatcccattcaaatttcgaattttagactaggagggtgcagcaataggctagcagccagctatggctatatatatgtatccaacctccctcgggtaggtatggcttttgtatttagtgaatgaagaaaaccagaaaattgccccatctcgagtgccatcctcttctcaatgagagtaaccattgaaattctaacatcgttattgttactgtgtgatacctcttatgcagtgtagattttccacctgcatatcagaattgggaagggactgatccaatggatctatttgtggctccagttctgcgatctgaatgcaaccctaaggtaaagcatttctccacagttcttaccgaagcttagtacttagtagctagcagctatgcctactcaattaagtccattatccaagaataagttcaccaagtactacatgaatgtcacatgttcccacttgaactctactgtttagtttagccaatgctgaagcatcttatttcatcctttccttcataattgctcgtttggcttctagctgtagtatccacaatctaatgttacgaatgttgtgattactgctgcccttcatttttttttaaatgaagttcatgttcatctatgaatcccacaaacttggattaattgtagatggtggataaaattcctctctataaagctttatcacaacacctgcaaaaacaccatagttttccatggttaggtatgaaactgatcactgatttatggttcttgcgaaggctcatatccgcaggcatctagctcaggaagctcgaggctgcacctacttggtactctggcttgattgtgaccgagaaggagaaaacatatgctatgaaggtatgctatcctgttttaggacctccatgggtatgtgtactagaaatctgggttggtgtacaaagagctttatgtgtccttttttggggtaaaatctgtactctgtgaagtgtgaaaacaaatatagatgtaaacaacctgaccaaaattcagaaaacaccagatggagaaatgcttcaggcctgaggtaactgctcagtgaactggattgctctggattcctcaaatctgtatacagttacgctttttgcatgagaaaaatatatagttaccctttgtatgcatgagagtttattctgcactgagaccctgattaatgctgtttgtacacaaacttttcattcgatttctttacatgtataaatcctgctctgttctacctacagatatttatgtcaatgtaataacaatggcactcttatattccagtaattgattgcactggaattcctaaaagtgaggttggcagaagaattttccgagccaaattttcgtccgttactgagaaagatataatggatgctatgaataatcttgttttgccaagtaaagatgaggcactagcagttgatgctcgccaagaaattgacttgaaggtaggagtagcatttactcgatttcaaaccagatattttcaaggaaaatatggaaatctcgactcaagagtaatttcgtgagttctctatatccctttggcaacctggagtcattaatcaactgtatgctagccttttttagaattttctgcagaattttgtcttacaattcttccccctgttctatatcaggtatggtccatgccaaacacctacacttggattctgtgtacaacgctatcagcagattaccacattcaaaccagagaaattttggtccttgaaaacttatgttatcaaggatggtaatgaaattcagcttgaatgggataggaagaaactttttgattttgatgtaagattcttgagtttataaccaaatgatttcattctattctttctaacatttatcatttcatcaatcaattttgcaggttactgtaatgttccaaaagatggtggccagtgatggtattttaaaagtaaccgacatatcagtgaaggaagagtgcaaagcccgcccgcctggccttaatacagttaatttgcttaaggtgcaacaacttaagactaattgtatttctccttgtttaaatcacgttcttcattgaacaatgatgctaccaaggttactattttgttatcggcaaagttcactgtgtgtacttatgagtagtgcactggtgtatgttagctgatttacatgcttcttttgaattatattgctgatattacagtgttctactacatatgatcatgtattaacatatacatcttttcctattctctacctcagatgcccttgattgacataatacaatattatagttattttcttgttagatttcaagtgtaagtttattaaatatttttattatccaggttgcatcaagtgcactaggtattggacctcagacagcaatgcacttggcagaaaggctttatacccaaggattcatcaggtttcaaaaatgaaccccagaaatattaattttgtactacatattctccctttgttctatggaaatgttaataacatgttt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| |
| − | Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001070113.2 RefSeq:Os09g0500600]|
| |
| − | }}
| |
| − | [[Category:Genes]] | |
| − | [[Category:Japonica mRNA]]
| |
| − | [[Category:Oryza Sativa Japonica Group]] | |
| − | [[Category:Japonica Genes]] | |
| − | [[Category:Japonica Chromosome 9]]
| |
| − | [[Category:Chromosome 9]]
| |
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Annotated Information
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Structured Information
