Difference between revisions of "Os11g0587600"

From RiceWiki
Jump to: navigation, search
 
Line 20: Line 20:
  
 
==Structured Information==
 
==Structured Information==
−
{{JaponicaGene|
+
[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 11]]
−
GeneName = Os11g0587600|
 
−
Description = Plant PDR ABC transporter associated domain containing protein|
 
−
Version = NM_001074706.2 GI:297612089 GeneID:4350807|
 
−
Length = 9563 bp|
 
−
Definition = Oryza sativa Japonica Group Os11g0587600, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
−
 
 
−
  ORGANISM  Oryza sativa Japonica Group
 
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
−
|
 
−
Chromosome = [[:category:Japonica Chromosome 11|Chromosome 11]]|
 
−
AP = Chromosome 11:24115381..24124943|
 
−
CDS = 24115703..24115972,24116068..24116322,24116818..24116989,24117105..24117337,24117490..24117624<br>,24117884..24117967,24118045..24118335,24118446..24118778,24118918..24119024<br>,24119165..24119308,24119398..24119563,24119702..24119842|
 
−
GCID = <gbrowseImage1>
 
−
name=NC_008404:24115381..24124943
 
−
source=RiceChromosome11
 
−
preset=GeneLocation
 
−
</gbrowseImage1>|
 
−
GSID = <gbrowseImage2>
 
−
name=NC_008404:24115381..24124943
 
−
source=RiceChromosome11
 
−
preset=GeneLocation
 
−
</gbrowseImage2>|
 
−
CDNA = <cdnaseq>atggatgatactaatgtccttgatttggcacgtacagatgacatcaagccatggtggatttggggttactgggcatctcctatgatgtatagtcaacaagcaatatcaatcaatgagttccttgctagtagatgggctattccaaatactgatgcaacaattgatgagccaactgttggcaaggctattctcaaatccaaaggcttgattactagtgatggggggttttggatttccattggagcccttataggattccttgttgtgttcaatatcttatacattttggcccttacatacttgagtcctggtggcagctcaaacacaatagtttcagatgaagatagtgaagataagacggacatgaaaacaagaaatgaacaacaaatgtcccaaattgtacacaataatggagctagtaatacatctgcaacatcgtcaatccccatgagtggaagcagatcaacaaatcagcaaagtagatcacaaattgtcttgcctttccaacccctttcactttgtttcaaccatgtaaactactatgtggatatgccaacagaaatgaaagagcaaggattcacagaaagccgtctccagttactatctgatatcagtggagttttcagaccaggtgttttgacagcattagttggtgtaagtggagctggcaagaccaccctaatggatgtcttagcaggaaggaaaacaagtggagtaattgaaggagacatcaccctctctggttatccaaagaaacaagaaacttttgcacgcattagtggttactgtgaacagactgatattcattcaccaaatgttactgtctatgaatccattctctactctgcttggctacgtctttcgtcagatgttgacaccaatacgaggaagatgttcgtggatgaagtcatgtcccttgtagagcttgatgtgttacgtaatgctttggtgggtcttcctggagttagtggtttatcaactgaacagagaaagaggctcacaattgcagtggagttggtagcaaacccttcagtaatattcatggatgagccaacttctggacttgatgctagagctgcagcaattgtcatgcgaaccgtgagaaataccgtcaacacgggacgcactgtggtttgcacaattcatcaacccagcatcgatatttttgagtcttttgatgagcttttgctattgaaaaggggagggcaagttatttatgctggtgaactcggccgccactcccataaactagttgaatattttgaggcagttccaggtgttccaaagataacagaaggatataatcctgcaacatggatgctagaagtcacctcccctatagctgaggctcgtcttaatgtaaattttgctgaaatttatgctaattctgagctttataggcccaggaaaaaccaagagctaatcaaggaattgagcactcccccaccaggatatcaagatctctcatttcctacaaagtattctcaaaatttctatagtcaatgcattgcaaacttttggaagcaatatcgttcttattggaagaatccaccatacaatgccatgcgctatcttatgacattgctcaatggccttgtctttggcacggtattttggcaaaaaggaactaagatatcatcacaacaagatttgttcaatttgcttggagccacttatgctgcaactttcttccttggggctgccaattgtatcacagttcaacctgttgtttccatcgaaagaacagtcttctaccgcgaaagggcagcagggatgtactcttcattgtcctatgcatttgctcaggcatgcgtggaggtcatctacaacatcttacaggggattctatacactattatcatctatgcaatgattggatatgactggaaagccgacaaattcttctatttcatgttctttattgtagcaagtttcaactacttcacattgtttgggatgatgttggtggcatgcaccccatctgcaatgcttgcaaacattctcatatcctttgtacttcctctctggaatctttttgctgggttcctcgttgttaggccgttgataccgatttggtggaggtggtactactgggcaaaccccgtgtcatggaccatctatggtgttgtggcgtcacagtttggtaaaaatggtgatgttctttcggttcccggtgggagccctacggtagtgaagcaattcttggaggacaacctagggatgcggcatagtttcctaggatatgttgtgctcacacattttggctacatcatcgttttcttcttcatctttggctatgccatcaagtacttcaacttccagaaacgatag</cdnaseq>|
 
−
AA = <aaseq>MDDTNVLDLARTDDIKPWWIWGYWASPMMYSQQAISINEFLASR                    WAIPNTDATIDEPTVGKAILKSKGLITSDGGFWISIGALIGFLVVFNILYILALTYLS                    PGGSSNTIVSDEDSEDKTDMKTRNEQQMSQIVHNNGASNTSATSSIPMSGSRSTNQQS                    RSQIVLPFQPLSLCFNHVNYYVDMPTEMKEQGFTESRLQLLSDISGVFRPGVLTALVG                    VSGAGKTTLMDVLAGRKTSGVIEGDITLSGYPKKQETFARISGYCEQTDIHSPNVTVY                    ESILYSAWLRLSSDVDTNTRKMFVDEVMSLVELDVLRNALVGLPGVSGLSTEQRKRLT                    IAVELVANPSVIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFESF                    DELLLLKRGGQVIYAGELGRHSHKLVEYFEAVPGVPKITEGYNPATWMLEVTSPIAEA                    RLNVNFAEIYANSELYRPRKNQELIKELSTPPPGYQDLSFPTKYSQNFYSQCIANFWK                    QYRSYWKNPPYNAMRYLMTLLNGLVFGTVFWQKGTKISSQQDLFNLLGATYAATFFLG                    AANCITVQPVVSIERTVFYRERAAGMYSSLSYAFAQACVEVIYNILQGILYTIIIYAM                    IGYDWKADKFFYFMFFIVASFNYFTLFGMMLVACTPSAMLANILISFVLPLWNLFAGF                    LVVRPLIPIWWRWYYWANPVSWTIYGVVASQFGKNGDVLSVPGGSPTVVKQFLEDNLG                    MRHSFLGYVVLTHFGYIIVFFFIFGYAIKYFNFQKR</aaseq>|
 
−
DNA = <dnaseqindica>8972..9241#8622..8876#7955..8126#7607..7839#7320..7454#6977..7060#6609..6899#6166..6498#5920..6026#5636..5779#5381..5546#5102..5242#agcttaattccaatgctgccttagctctagcaatctagctaggtaatttagctaagtaagctagcgacgctatctgggatggcgtcgtcggcggaggcggctgcggcgatggcggcggcgccgtcggcgagcgggcggcggagcatgagctgggggtcgtcgatctcgcagtcgttccggcaggcggaggcggacgacccgttcggtcgcgcggcgtcgcagcaggggcacgacgacgacgaggagaacctccggtgggcggcgctcgagaagctccccacctacgaccgcatgcgccgcggcgtcatccgcaccgcgctcctccatcacgacggcggcggcgacggcggcggcgcggcggcggcggcgaaggacgggaggatggagctcgtcgacatccagaagctcgccgccggcaacctcggccgcgcgctcctcgaccgcgtgttccaggacgacagcgagcgcttcctccgccgcctccgggaccgcatcgacatgtatggattgcatcgccatggatttcgtacaattaaagcttcattgaaattgaactatagctccattaatcaagctgatcgatggttggttgcagggtggggatcgagctgccgacgatcgaggtgaggtacgagcagctgtcgatccaggcggaggtgttcgtcggcagccgtgcgctgcccacgctcaccaacgccgccaccaacgtcctccaggtatatactccttccttccgttcctaaatataaacatttttttagtaaacaacagttcggcaaatgccaaacgacactcccctttctcgacttgcagtcccttgttttccactacaaactgataaacgttatgtttttttttctttttaaagttttatggggaagtttctttaaagaaaccatattaatctattataagttttttctaagctaatacgttattagctatgcgctaatgagtgagattagttttcaaccttatatgatgagcatagcctaagttgttaagcccagagcaagtgtttgaagaaaaggttccctttcggttatctggtttggtcacgttttaaattttgaattatccatgtaagaacctgattggcttgaaatgcatagattctcgcgtattggaaccagtgttccgcaaatgcttatattttttttttgtataaattcaaatcctacagatgttatacttcggaatggagggagtacaaagacttgagaggttctcttccacgtatgccatagtaattaattagtcaacagccgtccgttagatatgattaaaagtcttccctgtacaatattatcatataaaatagctttaaaataatactatacgtaccagttagcgattccttttaaatttttgaaaaaaaaaatcctgtgatatttaatttgtagaaacaaagggaatttctggtatattaataattaagaaaaagtaaactcacgtaacagaggctggcaaaccattgagtaacagaacttgatgtaaaggagagaattagttaatagcagtcgtcacatcataaaatttaaatttgtcaatgacatattatcgtacgcagaatatatgtttaatcactggtggtatatatatataatagagtttcttgaaaacatatatctatatatctaagtacatctatctcagattccttctagatcttctttcttaccggaaatgatgaaatagtggttgaattgtcctctgataaattataaattatatgggcgtaatttaataatgggactcttagacaaagtaagattagataattattatttgttttgtccagtggcatctaacttaaacagatgtctagtagctaacaagattgattatttgtgcctttcttattcgaggatagtcgtcacctgcacatgcaagcaaagatgggcagcttagatgtgtcaaaccttctagaatccctccataaaaaaaaagggagaaaaatcttctacaatcccttaggtttaagcatgcactgcacatgggagatggccttgcaaaatctcaagcaaaatctccagcaaagcacagctagggttcatatgcatattctatcgcatatatgactcgtagtccgtgtcactggctcgatcgaagagttcaatcaatcaatcatctttgttgttttgcttaagaaaactagagggcaagtgtcagtgtgtcactaatttgctcaaagagtttgatcaattttccttcgatttttcaaaaaattctcgaccagaaagggcatggagctccgtctatttaagcatgtgttagacgatatgtttgtaatgtggtgggtgtgtatatgttttactataacaaaaagaagaggagaaaaggacgtttaaagaaatttttaaacaagaacagtgaaagatggaacttcttcttcagagggccatcaggcaaaacaaaagctcaaaaaagaaggccagaacatctccctgaggcccaagttagaaattgacctatctttgtgccaaacttcctactaatatgtttttttcatagctatatgttatggtggtggactatcatcttttgggcttcggtccaaaaacaaatcaatttttgtgtgtgcttgatggatagaaaatgtgatgatgtttactggacagggtctcattggacgatttggttcttcaaataagaggaccattaacatactgcaagatgttagtggcatcatcaagccatccaggtagaaacatacactaccaatgtactagtttccaaatgttcgtattttcaaaagaagtactgaactatagttcttttttcttatttcaggatgacacttcttcttgggcctccatcctcgggaaagagcacactaatgcgagcacttacagggaagcttgataaaaacctcaaggtaattaaactcaaatccactcatctggtaaattatttactccctccgggttgataatacttgtcgtttcggacaagagcacggtctccaaaaaaataactttgacaactattttctattataatatatatatagaaatatcaacaaatatatgattttgattttattgaagtactttttaagactaatctacacatatgatttttatatttttaagataaatattttaaaaattaattgtagtcaaagattttaaagtttgactttacccttattcaaaacgactaatattatcaacccggagagagtacatgttaactcattcctgccatatgctcattcatcctattgcgaccaacccaggtgtccggcgacatcacatactgtggacacacattttctgagttctaccctgagaggaccagtgcatatgtcagtcagtatgatcttcataatgcagagatgactgtgagagagacattggatttctctgggcggtgcttaggcattggtgcaagatatgacatgctcgcggaactcgcgagaagggagcgcaatgcaggcattaagccagatcctgagatcgatgctttcatgaaagctactgcagtgcaagggcataaaactaacatcactacagatgttactctcaaggtgagattctgatctatctgttgcctatatatatatttgtccaagaggcaaattaaataaaagaaaagaaaatgcacttttttttcatttaccttgatgtgtaggcacttgggttggacatttgtgctgatattattattggggatgagatgattagaggaatttctggtgggcaaaagaagcgtgtgacaacaggtatgcattcaaaatattcaaaccatgataacttcagtagaataagttgcaatgattaaaatcaattgtttaaattttagaccatttgtttgctctaatttcaaattaattgtctagaatcattttttttacttgcttggtgacaggggagatgttaacgggaccagcacgggcattgttcatggatgaaatatccaccggtctagatagctctagcacatttgagattgtcaagtatattgggcatttggtccatgtgatgaatgagactgtgatgatatccctcctgcagccaccaccggagacctacaatctttttgatgacataattctactatcagaaggatatatagtctatcacggaccacgtgagaacatcttggaattcttcgaaaatgctggtttccgatgccctgaaaggaaaggaatcgctgatttccttcaagaggtcacttccaagaaagaccagcagcagtactggtaccatgaccaagaacggtatcggtatgtgtcagttccagagtttgcacaacgtttcaagtcattccatgtaggtcagaaaatgcagaaggagatgcaaattccttatgacaagtccagcacacatcctgctgcattgacaactaccaagtatgggctatccagttgggagtcactcagggcagtgatgtcaagagagtggttattgatgaagcgcaactccttcatctacattttcaaggtcacccagttgatcatccttgccttcatgtccatgactgtgttcctcagaacaaagatgcctagtgggacaatctctgatggcactaaattccttggggctctcacctttagtttgatcaccatcttgttcaatggctttgctgagctacaactgaccataaagaagcttcctgtgttctacaaacatagagatttcttgttcttccctgcatggacctttggagtagcaaatatcctcttgaaagttcctgtttctcttgtagaggcggcggtatgggttgtgctcacatactatgtgatggggtttgcaccctctgcaggaaggtaaatttgtatggttcattttctagttttagtgctaaaatttgcatacaaagcttcatgacgagttcttttatatattgattttaggttctttcgtcaatttatagctttctttgttactcaccaaatggcaatggctatgttccgatttcttggtgctattttgaaaacaatggttgtggccaatacttttgggatgtttgtgctgcttattgtcttcatttttggaggatttctcatatctagaagtaagtatgttcccatgtaaatatatttatatttcctaggaataagcaatgaagaatcaatattggccatttaatatttatggatgatactaatgtccttgatttggcacgtacagatgacatcaagccatggtggatttggggttactgggcatctcctatgatgtatagtcaacaagcaatatcaatcaatgagttccttgctagtagatgggctattgtaagtttcttactgaaacttatattatgtttgatgtttctctcctctctctaaattaatttataggaaaccgagacatctcattcttgttaatgttgtgccattttaacaaacgaagaacattttttcttgctgcagccaaatactgatgcaacaattgatgagccaactgttggcaaggctattctcaaatccaaaggcttgattactagtgatggggggttttggatttccattggagcccttataggattccttgttgtgttcaatatcttatacattttggcccttacatacttgagtcgtaagcaccattgctttcctcattacgctgttactttgatgtcatatttattcacaatacttataattcatttaaattattcctcccagctggtggcagctcaaacacaatagtttcagatgaagatagtgaagataagacggacatgaaaacaagaaatgaacaacaaatgtcccaaattgtacacaataatggagctagtaatacatctgcaacatcgtcaatccccatgagtgagaccttatttatccattttatatgattgtagcctttataatattatcaagctcaagtatattatctgtattatgactactgatgtcttactaagtaattttacatcatggtaaaatttacacattttattcaacaggtggaagcagatcaacaaatcagcaaagtagatcacaaattgtcttgcctttccaacccctttcactttgtttcaaccatgtaaactactatgtggatatgccaacagtaagcttaccttcccccttcagaaaaatcatgctaaaatagtaaaatatgaattctcactttgacaactttaacatttacgtatgtcagctaaaaatcaaactgaggctaacatgtttttcattgttaattattctaggaaatgaaagagcaaggattcacagaaagccgtctccagttactatctgatatcagtggagttttcagaccaggtgttttgacagcattagttggtgtaagtggagctggcaagaccaccctaatggatgtcttagcaggaaggaaaacaagtggagtaattgaaggagacatcaccctctctggttatccaaagaaacaagaaacttttgcacgcattagtggttactgtgaacagactgatattcattcaccaaatgttactgtctatgaatccattctctactctgcttggctacgtctttcgtcagatgttgacaccaatacgaggaaggtaatactaaactatgttccacactcatgatgttgtattgctgagctctatatatgtgaacatccaaatagtaatttaatcaaatttaactgaactcttcactcatgtagatgttcgtggatgaagtcatgtcccttgtagagcttgatgtgttacgtaatgctttggtgggtcttcctggagttagtggtttatcaactgaacagagaaagaggctcacaattgcagtggagttggtagcaaacccttcagtaatattcatggatgagccaacttctggacttgatgctagagctgcagcaattgtcatgcgaaccgtgagaaataccgtcaacacgggacgcactgtggtttgcacaattcatcaacccagcatcgatatttttgagtcttttgatgaggtccctctctttgctatttctctttgaaattctaaaaaaaaattcatgtaaataaataacgattgtttcttctccagcttttgctattgaaaaggggagggcaagttatttatgctggtgaactcggccgccactcccataaactagttgaatattttgaggtgaatgtcttgttttcaatgcaatatacatgttctagtttgtgaacaacaaatatttcttttatgccctactaaactagaattatggcaacacaatcatgctcgtattattttaaaaaaatgtttttgttacttatttgccaagttctgacttgctcataaatatggtcaatgatcttggaagattagcaaataataattatttgtaggtgtaacaaactatatgtggcatcacatgagattatctttcacccttcaggcagttccaggtgttccaaagataacagaaggatataatcctgcaacatggatgctagaagtcacctcccctatagctgaggctcgtcttaatgtaaattttgctgaaatttatgctaattctgagctttataggtatgtagcctcaatcgaaaccctccttttgttactttcttaactaccaatgcttgtttacattgaaattagtttggatcccaaacaaacaaacaaaattagcaactatggtcgattttgttactgacattaaggtcaactttcataaatatgcccaggaaaaaccaagagctaatcaaggaattgagcactcccccaccaggatatcaagatctctcatttcctacaaagtattctcaaaatttctatagtcaatgcattgcaaacttttggaagcaatatcgttcttattggaagaatccaccatacaatgccatgcgctatcttatgacattgctcaatggccttgtctttggcacggtattttggcaaaaaggaactaagatgtatgatcctatacttgacatcaatgctgatggaattagtagtgatgctatattaaactctttggtggcatactaacgcttttaaatatgtttgatttgtgttttacatgaatagatcatcacaacaagatttgttcaatttgcttggagccacttatgctgcaactttcttccttggggctgccaattgtatcacagttcaacctgttgtttccatcgaaagaacagtcttctaccgcgaaagggcagcagggatgtactcttcattgtcctatgcatttgctcaggtaatgtgtgaaattaacatgttgactgttgttagctgcattgagtgaaatgtgattgttttggttgcactaactatgctccaaataaatgggatatctactgctcctatgctttgacttattgaagaagcatcggaaagagtttggagagaacatgagcaatagatattgatataacgagcataatggcatcgccaataaactagtataatattggtcatttgtgaactaagagctcatcaaaatgtctcctcattttttaatcaaagatagttataaataattgcggttcagatcaaaatataagggaaaataaaattaaaaaattacaatataaacctcataatatattttttactgggaacctcataatattttatgaagcaataatatattaaatgagtttgagaatgtaaaggttgcataccaaccaaaaaaaatgaagagggtgtggaaggtacaacatgatttttaatttagagtcaattcgtgcaggcatgcgtggaggtcatctacaacatcttacaggggattctatacactattatcatctatgcaatgattggatatgactggaaagccgacaaattcttctatttcatgttctttattgtagcaagtttcaactacttcacattgtttgggatgatgttggtggcatgcaccccatctgcaatgcttgcaaacattctcatatcctttgtacttcctctctggaatctttttgctgggttcctcgttgttaggccggtaagctagaaagtgttttaatttctcacagttatgcattgataagtagctagcttagctatgttctcttatcgacttggtgtgtgttgatgcagttgataccgatttggtggaggtggtactactgggcaaaccccgtgtcatggaccatctatggtgttgtggcgtcacagtttggtaaaaatggtgatgttctttcggttcccggtgggagccctacggtagtgaagcaattcttggaggacaacctagggatgcggcatagtttcctaggatatgttgtgctcacacattttggctacatcatcgttttcttcttcatctttggctatgccatcaagtacttcaacttccagaaacgatagagatggtatgttatggcatagagtgacattatttttggccgccactgccacttgcagctaaagagggctactacacaattacttagttaagttagaagtgcttgtagattgttctagtttgtaaacattcacttcatgtatctatatacacaccaatgctattctaagccatggatgtgatttgttattccatttgcagaccaatagatcatcctaagattgtataaacctctaggaattgtaaaagttggcccacaagtgtaaaaaaaccctctcatttgcgtcctaaccttgccggacctcacccatgatcataaaatcc</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001074706.2 RefSeq:Os11g0587600]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 11]]
 
−
[[Category:Chromosome 11]]
 

Latest revision as of 13:57, 14 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information