Difference between revisions of "Os07g0514400"

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==Structured Information==
 
==Structured Information==
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{{JaponicaGene|
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[[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 7]]
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GeneName = Os07g0514400|
 
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Description = Tetratricopeptide-like helical domain containing protein|
 
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Version = NM_001066308.2 GI:297607294 GeneID:4343371|
 
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Length = 4890 bp|
 
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Definition = Oryza sativa Japonica Group Os07g0514400, complete gene.|
 
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Source = Oryza sativa Japonica Group
 
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  ORGANISM  Oryza sativa Japonica Group
 
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            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
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            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
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            clade; Ehrhartoideae; Oryzeae; Oryza.
 
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|
 
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Chromosome = [[:category:Japonica Chromosome 7|Chromosome 7]]|
 
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AP = Chromosome 7:20398125..20403014|
 
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CDS = 20398125..20398235,20398820..20398953,20399502..20399625,20399719..20399988,20400698..20400892<br>,20400973..20401065,20401148..20401276,20401383..20403014|
 
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GCID = <gbrowseImage1>
 
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name=NC_008400:20398125..20403014
 
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source=RiceChromosome07
 
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preset=GeneLocation
 
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</gbrowseImage1>|
 
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GSID = <gbrowseImage2>
 
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name=NC_008400:20398125..20403014
 
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source=RiceChromosome07
 
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preset=GeneLocation
 
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</gbrowseImage2>|
 
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CDNA = <cdnaseq>atggcgggtgttgtcgtggggagcaagagcaaccgggactggtcggactgcgacgccgccttccgcgaggaggcgggcagggcgatcgtcgcgctgacggaggagggcgagcaagggcacgcgcacgggctctcgctcgcgacggcgctcgtcggcaggtacccgtggtcgccactcgcccgcgccatcctcgcgcgctgctaccttcagcgcaacagtcggcagcaggagagggttcagctcgagctggcggcggtgctcgccccgcgctgcccccacatcgcctcgctgctcatcgacgcgctcatctccatggatttgtttgacgaggcagcggaggtgcgtgaccgcgccctccgcgtggcggagcccaccgacccggcgttgcactacaccttcgtgagcaaccgctactcctccgccgatcatcacgacaaccccttcgatctcgagtacaggaaagcccacggccgagagacgatccgcgggcagcgtgcgaggatcgagaagggcaaggggcaagccgcggcttcaccggagcccgcgtccacgccggagtggccgccggaaaccgtcgacctcggaatcgccggcgatcgctggagccgcatgagcgaggaggagcggcaagcgctcctcaaggtgagttttggagagatgaagtcgtactgccgctcacgagggttgatggatatgacaagtatgctttccgatgctgaggtgttcgtcaagaagggttggtcttgccctttctgctccggaatgatctacgtggaattcgcggctttcaagagtcacatcgatgaggaacatattgtgggcaaagaatttctgtcattagtacccgaaagaatatctgacagtgagagggagcttctcagatcatggagatgggagccaaccgatggagatgatttggcagggaggacaaagatcttgcgcgaggttaaggaaatcgtctttgagctcattgatttggaagtcgtttctctcaaccttctgtacatcatgcacaagttcataatgaaccgggtcaggccagtagcacctttggtagtatccatgtgtgggtcttgtgggattggacagttgagttccacacaccttcaggaactgtgtgaattgctcaagccgcttaagctcgttgtgcagacccagagaggttgggaacatcagaagcatcacaatgatgaacaagagagccagcaagattcgctcgttgtgcatacccatagaggctgcaaccatcataagcgtcgcaatggcgaacaagagagccagcaagattcgcttgttgggattacctggtcccaagagacaggcacactatcttttgattgtgagaagattgcatcaagagaaactgatggttctagccaggcagatcgactttttgcctgtctattatctgaacctttgcttgaggatcccatggaattgtgtttcagcatgtggagagaatgttttgttgatggacctgacattcttaacaacataagtcgagcattgggtaaagcgaagctgaaattcagctcatgggaagagctaaaaggaatacaaggaggtgtttatttccttcctaaggccatttttgagagagatattgacatcaagacttattttgattcttggattggctctgcacgagttgagatgctattaattgatgctgaggtggattactggaaggaaagtcttctgaaaacttgtcaagttgattgccttgcggttatttcacctattgcaaaggcttgcctttgggcaaaattggttaatgatcccctagaggatgctttacttgctcatccacaaaattgtcataaaccacaggttcctttggatgccattctccggtctttgtggcacataaggagattctgcggtgatctctgggagataccatgtatatcccctgatgttaaagccagagtatatcgcgctatcttgttgcgtatcttccgttcttgggaccagtgcaaaacatgtgacctacctagttcagcgatattcatggttgattctttgagaagttttgtgattgatgaaaaggctggaaacatttctgcgtatagagttgttgaatcaatccttgagaggctgcacgtggcacaaactcctttgcattttgagttcaagggtgaatctttggtgccacaaacagcaatagtgcccagccttctgggttgtatatgcctagcacacaatctttttgggttgcacattattgagaagaaatgcaactgtgtgaatgaggtccccatgaaaaccaagtctacattcttccacagtattaatttgggttctgttgaaggaactacgttggagtctttcagtgaactcttgaaagctgtagacaagcagtcagtttgtgacttcaggaatggtggctgtgggcataggattacccgatacctatggtatccaccacattttttcatgatagttttgagatggccagacaacaagggaaaccatattaacatgcataaagtattgatcagcctagcagcggagttggacattagtcatatctacgaaggtctgcaatcagaaagcatgtacactctggtttctgcacaagctgaatcctggaaaggattaatcgaccggtacagtcaggccaatctccgtcctgagatccttttctttgagcatggcaggaagcgtgatcatagactgttgctgtga</cdnaseq>|
 
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AA = <aaseq>MAGVVVGSKSNRDWSDCDAAFREEAGRAIVALTEEGEQGHAHGL                    SLATALVGRYPWSPLARAILARCYLQRNSRQQERVQLELAAVLAPRCPHIASLLIDAL                    ISMDLFDEAAEVRDRALRVAEPTDPALHYTFVSNRYSSADHHDNPFDLEYRKAHGRET                    IRGQRARIEKGKGQAAASPEPASTPEWPPETVDLGIAGDRWSRMSEEERQALLKVSFG                    EMKSYCRSRGLMDMTSMLSDAEVFVKKGWSCPFCSGMIYVEFAAFKSHIDEEHIVGKE                    FLSLVPERISDSERELLRSWRWEPTDGDDLAGRTKILREVKEIVFELIDLEVVSLNLL                    YIMHKFIMNRVRPVAPLVVSMCGSCGIGQLSSTHLQELCELLKPLKLVVQTQRGWEHQ                    KHHNDEQESQQDSLVVHTHRGCNHHKRRNGEQESQQDSLVGITWSQETGTLSFDCEKI                    ASRETDGSSQADRLFACLLSEPLLEDPMELCFSMWRECFVDGPDILNNISRALGKAKL                    KFSSWEELKGIQGGVYFLPKAIFERDIDIKTYFDSWIGSARVEMLLIDAEVDYWKESL                    LKTCQVDCLAVISPIAKACLWAKLVNDPLEDALLAHPQNCHKPQVPLDAILRSLWHIR                    RFCGDLWEIPCISPDVKARVYRAILLRIFRSWDQCKTCDLPSSAIFMVDSLRSFVIDE                    KAGNISAYRVVESILERLHVAQTPLHFEFKGESLVPQTAIVPSLLGCICLAHNLFGLH                    IIEKKCNCVNEVPMKTKSTFFHSINLGSVEGTTLESFSELLKAVDKQSVCDFRNGGCG                    HRITRYLWYPPHFFMIVLRWPDNKGNHINMHKVLISLAAELDISHIYEGLQSESMYTL                    VSAQAESWKGLIDRYSQANLRPEILFFEHGRKRDHRLLL</aaseq>|
 
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DNA = <dnaseqindica>4780..4890#4062..4195#3390..3513#3027..3296#2123..2317#1950..2042#1739..1867#1..1632#atggcgggtgttgtcgtggggagcaagagcaaccgggactggtcggactgcgacgccgccttccgcgaggaggcgggcagggcgatcgtcgcgctgacggaggagggcgagcaagggcacgcgcacgggctctcgctcgcgacggcgctcgtcggcaggtacccgtggtcgccactcgcccgcgccatcctcgcgcgctgctaccttcagcgcaacagtcggcagcaggagagggttcagctcgagctggcggcggtgctcgccccgcgctgcccccacatcgcctcgctgctcatcgacgcgctcatctccatggatttgtttgacgaggcagcggaggtgcgtgaccgcgccctccgcgtggcggagcccaccgacccggcgttgcactacaccttcgtgagcaaccgctactcctccgccgatcatcacgacaaccccttcgatctcgagtacaggaaagcccacggccgagagacgatccgcgggcagcgtgcgaggatcgagaagggcaaggggcaagccgcggcttcaccggagcccgcgtccacgccggagtggccgccggaaaccgtcgacctcggaatcgccggcgatcgctggagccgcatgagcgaggaggagcggcaagcgctcctcaaggtgagttttggagagatgaagtcgtactgccgctcacgagggttgatggatatgacaagtatgctttccgatgctgaggtgttcgtcaagaagggttggtcttgccctttctgctccggaatgatctacgtggaattcgcggctttcaagagtcacatcgatgaggaacatattgtgggcaaagaatttctgtcattagtacccgaaagaatatctgacagtgagagggagcttctcagatcatggagatgggagccaaccgatggagatgatttggcagggaggacaaagatcttgcgcgaggttaaggaaatcgtctttgagctcattgatttggaagtcgtttctctcaaccttctgtacatcatgcacaagttcataatgaaccgggtcaggccagtagcacctttggtagtatccatgtgtgggtcttgtgggattggacagttgagttccacacaccttcaggaactgtgtgaattgctcaagccgcttaagctcgttgtgcagacccagagaggttgggaacatcagaagcatcacaatgatgaacaagagagccagcaagattcgctcgttgtgcatacccatagaggctgcaaccatcataagcgtcgcaatggcgaacaagagagccagcaagattcgcttgttgggattacctggtcccaagagacaggcacactatcttttgattgtgagaagattgcatcaagagaaactgatggttctagccaggcagatcgactttttgcctgtctattatctgaacctttgcttgaggatcccatggaattgtgtttcagcatgtggagagaatgttttgttgatggacctgacattcttaacaacataagtcgagcattgggtaaagcgaagctgaaattcagctcatgggaagagctaaaaggaatacaaggaggtgtttatttccttcctaaggccatttttgagagagatattgacatcaagacttattttgattcttgggtatgttttcctttttttaaaaaaaaaattatgtttgctctctaattttataccatcattttaatctcgttgatcaatgcttaaatcctagttgctgtatttgcagattggctctgcacgagttgagatgctattaattgatgctgaggtggattactggaaggaaagtcttctgaaaacttgtcaagttgattgccttgcggttatttcacctattgcaaaggcttgcctttgggtcagtatggttctttcagcacgaactgaacttgtaaagcatgtctgtaactttatttgtgtatgatattcattgttgacaggcaaaattggttaatgatcccctagaggatgctttacttgctcatccacaaaattgtcataaaccacaggttcctttggatgccattctccgggtaacgtgtgtttggatccttcagtttttaatatttagctattagttttcctatctctgattctctctgcataactgcagtctttgtggcacataaggagattctgcggtgatctctgggagataccatgtatatcccctgatgttaaagccagagtatatcgcgctatcttgttgcgtatcttccgttcttgggaccagtgcaaaacatgtgacctacctagttcagcgatattcatggttgattctttgagaagttttgtgattgatgaaaaggtttgcgttcgctttctgtttcccacctatctaaatgcagcctgtgacctcagggaaaataccagagagcaactttcttatcaaatgctaaccgtctccatgtagtttactcatatttataatggataagttataaatatttcatataaaatgaactggatagctgcctgatatctttcaagttttgagttttgactccatagttctgtttgggcactattggaaaagataggcaaaatggcattcttcttaaactacttattggtacgtactactcccaagcttgttttacattctcattggctcattgctctaatacacaaagtgattgtttagtattttaggcttttaatttgagagataatacaatttattaaaagaaacagaaatgtttacagaaataaacatttctgtgatccatatgaatctgtgctaatcttttggccattttgtgcaacaatttgccgttctttaaagtaaattaaattaaaaccctgtttgtcgtgatagaatgttgcaggttcaattctgcaaatgcttattttactaatttgatacaagagtcacctttatattgtctgagtcttgactgcaaaccaagttctgtcccacttgcacttccgagtgtacatattgactgtaacataaggaaagtttgagcatgttgctctcgtagccaataagatcactggttcttctttttttttaggctggaaacatttctgcgtatagagttgttgaatcaatccttgagaggctgcacgtggcacaaactcctttgcattttgagttcaagggtgaatctttggtgccacaaacagcaatagtgcccagccttctgggttgtatatgcctagcacacaatctttttgggttgcacattattgagaagaaatgcaactgtgtgaatgaggtccccatgaaaaccaagtctacattcttccacagtattaatttgggttctgttgaaggaactacggtacatactgcacagtgtatccttttgatatttccttttttatatgtccatcttttctttaattagcaaactaacatccttttacttattcagttggagtctttcagtgaactcttgaaagctgtagacaagcagtcagtttgtgacttcaggaatggtggctgtgggcataggattacccgatacctatggtatccaccacattttttcatgataggtaccgccttctcgactaacatttcaatgtaattgtgtgcatatgtttcttctatgtaggagaaaggaaagataagcgaaagaaatcattggatcagtgtatcatctgatctttaattttatcctgaaaaccatatcaatcgttgaatataaattacaccatatctgctattgtaatggctgcaacataaaataattaatcgccacgacctttcctgcgacaatttgatgccagccttctgtgcacatacatcatttattcatttctggcaattagggaaaacctaggagacaacaagcattcttcttattaatatgaagaaaagaaatataaggggacttttaagctgagtaatggggacagatgtctgcatctttcatcaatcgacctaaacttagagcctaaatcgagaatatctaggaggacctaggcatctggtgtcattgagaagaagacgctagatctgagatagaggactcgaaccttggtcgggactggggatgcacgcaagctgatttagtttctcttctattgctgttttgtcacagttttgagatggccagacaacaagggaaaccatattaacatgcataaagtattgatcagcctagcagcggagttggacattagtcatatctacgaaggtctgcaatcagaaagcatgtacactctggtttctgcagtacgtgctgagagaagtctttcctttttatgcatatctgtgaaaaaaaaagtgaattcatttgttcctgaggttgattcgttctttaccttttcttctcagtttcagtgtgtttttgtatatgaatagtatctaatgtactagtctggggtttatttatgtatgatttgtcatttatgttatacctgtcaaatcagttcaaatattgctttgctatcatgttggtagatcattgtaggagtatattttattatcttctttggtcggatcagttgcttggcaataggcaattgtagtgtcagattatcgtaagtaatgcttgcctgactagtatggagttctgtttctggtattcgcgcgatagcatctgggtaattttcaaactgtttttaatggaaggtatgctatgatgatgaggggcggcaatacctctgctttggtcgtgacgaggcaaggtggctcatacatgacagcacgacagtccaggcaattccttgtcagctttcgcacttgagttttcactcgaatttggtttcagaattattcgatatcatcatcattcgtaaatgttcgtctccttgcagcaagctgaatcctggaaaggattaatcgaccggtacagtcaggccaatctccgtcctgagatccttttctttgagcatggcaggaagcgtgatcatagactgttgctgtga</dnaseqindica>|
 
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Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001066308.2 RefSeq:Os07g0514400]|
 
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}}
 
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[[Category:Genes]]
 
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[[Category:Japonica mRNA]]
 
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[[Category:Oryza Sativa Japonica Group]]
 
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[[Category:Japonica Genes]]
 
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[[Category:Japonica Chromosome 7]]
 
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[[Category:Chromosome 7]]
 

Latest revision as of 14:14, 14 May 2015

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Structured Information