Difference between revisions of "Os12g0138900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os12g0138900| Description = Similar to Plastid isopropylmalate synthase (Fragment)| Version = NM_001072648.1 GI:115487257 GeneID:4351460| Length...")
 
 
Line 1: Line 1:
−
{{JaponicaGene|
+
Please input one-sentence summary here.
−
GeneName = Os12g0138900|
 
−
Description = Similar to Plastid isopropylmalate synthase (Fragment)|
 
−
Version = NM_001072648.1 GI:115487257 GeneID:4351460|
 
−
Length = 5888 bp|
 
−
Definition = Oryza sativa Japonica Group Os12g0138900, complete gene.|
 
−
Source = Oryza sativa Japonica Group
 
  
−
  ORGANISM  Oryza sativa Japonica Group
+
==Annotated Information==
−
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
+
===Function===
−
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
+
Please input function information here.
−
            clade; Ehrhartoideae; Oryzeae; Oryza.
+
 
−
|
+
===Expression===
−
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|
+
Please input expression information here.
−
AP = Chromosome 12:1887989..1893876|
+
 
−
CDS = 1888193..1888914,1890247..1890460,1890535..1890615,1890753..1890842,1890950..1891036<br>,1891553..1891653,1892241..1892274,1892366..1892440,1892557..1892640<br>,1892721..1892855,1893216..1893358,1893488..1893629|
+
===Evolution===
−
GCID = <gbrowseImage1>
+
Please input evolution information here.
−
name=NC_008405:1887989..1893876
+
 
−
source=RiceChromosome12
+
You can also add sub-section(s) at will.
−
preset=GeneLocation
+
 
−
</gbrowseImage1>|
+
==Labs working on this gene==
−
GSID = <gbrowseImage2>
+
Please input related labs here.
−
name=NC_008405:1887989..1893876
+
 
−
source=RiceChromosome12
+
==References==
−
preset=GeneLocation
+
Please input cited references here.
−
</gbrowseImage2>|
+
 
−
CDNA = <cdnaseq>atggcctcctccctcctctcctccccaaaaccctcctccttctcctccgcaaaccccacctccactccacgcccacgcgcccaaactctctcccccttccgcgccgccgccccacgcttctcccatggcctcgccaccgccgccgccgccgcaaaccctagcgcctcccgccgctgctaccaccgcgccttcgcccgccccgtccgggcgtccatggcgcagccgcggcgcccggagtacgtccccaaccgcatcgacgaccccaactacgtccgcatcttcgacaccaccctccgcgacggggagcagtcccccggggccaccatgaccagcgccgagaagctcgtcgtcgcgcgccagctcgcccgcctcggcgtcgacatcatcgaggccgggttcccggcctcctcccccgacgacctcgacgccgtgcgctccatcgccatcgaggtcgggaacacgcccgtcggggaggacggccacgtgccggtcatctgtggcctctcgagatgcaataagcgagacattgatgctgcctgggaggccgtgcggcacgcgcggcggccgcgcatccacaccttcattgccaccagcgagatccatatgcagcacaagctaaggaagacgcccgagcaggtggtggccattgccaaggaaatggtggcctacgcccgcagcctaggctgccctgatgtcgagttcagccctgaagacgctggcaggtcaaacagagagtttctatatcatatactagaggaagtcataaaagctggagcaacaacactcaatatcccagacactgttggatacactcttccttatgaatttgggaaactaattgctgatataaaagcaaacactccaggaattgaaaatgccattatttctactcattgccagaatgaccttggtctagcaaccgcaaatacattagcgggcgctcatgcaggagcacggcaattagaggtgactatcaatggtattggtgaaagggctggaaatgcttctttggaagaggttgtgatggcaattaaatgtcgtcgagaactcttaggaggtctgtatactggaatcaatacccaacatatcactatgtcaagcaaaatggtacaagagcacagtggacttcatgtacaaccacataaagctattgtcggtgccaatgcctttgcacatgaaagtggaattcatcaggatgggatgcttaagtacaaaggaacttatgaaataatttctcctgatgatattggtctaacacgtgcaaatgagtttggtattgttcttgggaagctcagtggaaggcatgctgtgagatctaaactagtggagcttggatatgaaatcactgacaaggaatttgaggatttctttaaacgctacaaagaggttgcagagaagaaaaagcgtgtaactgatgaagacattgaggcgctgttgtctgatgagatatttcagcccaaggttttttggtcccttgctgatgtacaggcaacttgtggaacacttggtctgtctacagcaactgtcaaactgataggtccggatggagatgagaagattgcatgtgcagttggaacaggtccagttgatgcagcttacaaggctgttgatgatataatacagatcccaactgttcttcgagaatatagcatgacatcggtcacagaaggcattgatgcaattgcaactactagagtggttgtcactggagatgtcagcgactctaaacatgctttgactggtcactccttcaaccgggcattcagtgggagtggtgccgcactggatattgttgtttccagtgtgcgagcttacctgagtgccctgaacaagatgtccagttttgttggggctatcaaggctagtagtgaagtatctgaaagccaaagagttcaaaccacagaatga</cdnaseq>|
+
==Structured Information==
−
AA = <aaseq>MASSLLSSPKPSSFSSANPTSTPRPRAQTLSPFRAAAPRFSHGL                    ATAAAAANPSASRRCYHRAFARPVRASMAQPRRPEYVPNRIDDPNYVRIFDTTLRDGE                    QSPGATMTSAEKLVVARQLARLGVDIIEAGFPASSPDDLDAVRSIAIEVGNTPVGEDG                    HVPVICGLSRCNKRDIDAAWEAVRHARRPRIHTFIATSEIHMQHKLRKTPEQVVAIAK                    EMVAYARSLGCPDVEFSPEDAGRSNREFLYHILEEVIKAGATTLNIPDTVGYTLPYEF                    GKLIADIKANTPGIENAIISTHCQNDLGLATANTLAGAHAGARQLEVTINGIGERAGN                    ASLEEVVMAIKCRRELLGGLYTGINTQHITMSSKMVQEHSGLHVQPHKAIVGANAFAH                    ESGIHQDGMLKYKGTYEIISPDDIGLTRANEFGIVLGKLSGRHAVRSKLVELGYEITD                    KEFEDFFKRYKEVAEKKKRVTDEDIEALLSDEIFQPKVFWSLADVQATCGTLGLSTAT                    VKLIGPDGDEKIACAVGTGPVDAAYKAVDDIIQIPTVLREYSMTSVTEGIDAIATTRV                    VVTGDVSDSKHALTGHSFNRAFSGSGAALDIVVSSVRAYLSALNKMSSFVGAIKASSE                    VSESQRVQTTE</aaseq>|
+
    [[Category:Genes]][[Category:Oryza Sativa Japonica Group]][[Category:Japonica Chromosome 12]]
−
DNA = <dnaseqindica>205..926#2259..2472#2547..2627#2765..2854#2962..3048#3565..3665#4253..4286#4378..4452#4569..4652#4733..4867#5228..5370#5500..5641#gtcttcttcgccgcaaaaaccacgccgccatcacagcattcgtgcatcccacgaaacccccgttgtcatgtccagataagagctccacctctgactcacacacacatcaccgagaagcagagcaagtgcatctccctctcccaccatttgattcgattcccctaaacccccgagtcgtcgacgccacaaaccccggcgaccaccatggcctcctccctcctctcctccccaaaaccctcctccttctcctccgcaaaccccacctccactccacgcccacgcgcccaaactctctcccccttccgcgccgccgccccacgcttctcccatggcctcgccaccgccgccgccgccgcaaaccctagcgcctcccgccgctgctaccaccgcgccttcgcccgccccgtccgggcgtccatggcgcagccgcggcgcccggagtacgtccccaaccgcatcgacgaccccaactacgtccgcatcttcgacaccaccctccgcgacggggagcagtcccccggggccaccatgaccagcgccgagaagctcgtcgtcgcgcgccagctcgcccgcctcggcgtcgacatcatcgaggccgggttcccggcctcctcccccgacgacctcgacgccgtgcgctccatcgccatcgaggtcgggaacacgcccgtcggggaggacggccacgtgccggtcatctgtggcctctcgagatgcaataagcgagacattgatgctgcctgggaggccgtgcggcacgcgcggcggccgcgcatccacaccttcattgccaccagcgagatccatatgcagcacaagctaaggaagacgcccgagcaggtggtggccattgccaaggaaatggtggcctacgcccgcagcctaggctgccctgatgtcgagttcagccctgaagacgctggcaggtatcacttctaattgtaaatttgttcaacctttaggtccaatttttaaaattgtaagccttaaaatgaccaaaagtttgatacctggagtagtaattacaatgttggttggaaccggcatctgacctattggttggagtaataatctagatgtctgaaagtattgtgaatgaaagaggtccatccaactattgggaagctaggttgattgaggcaaagcgatatatgcttagtatatcaagtacttaaatttactttggtctggagattaagtactatgcatcatgtataccctactttgaacacattcatcattgactcagcgatgctggcatgtatcacttctaactgcatatttgtttgatttttaggccaatatttttaaactgtaagccttaaaatgaccaaaagtttcatatctggagtagtaattacaatgtggtttggaactggcatctgacttattagctaataatctagatgttggaaagtacaatgaatgaaagaggtctatccaacttttaattgcaaatttgtaatcattaggttacttttaaaatagtcagcgttgaaatgtccaacaatttcagtaattataatatgggttggaattgacaccatacctagtaatctatatgcctaagtactgtgcatgtaagaggtccatccaactttagtgaagtggggttgattttgaagcgatgcggtgtatgcttagttgcttactatcaagtactgaatttactttggtctggaaagggaagtattatgtatattgtatcttgaataccttcatccttgtactgctggtagatgtctacaatatgtaaggagttctagtagtaaatcaaagagaatgctagttgccagctactaaaattttgtggttgtgttccatctttaaatctacacacgaagcttattgttgcatatcatttactgtacattctttgctttcaaacatgttggcgcaaaaggaatgcctaaacattagctcatgccaagctattatctactccctccattttttaatagatgacgccgttgactttttctcacatgtttgaccattcgtcttattcaaaaattttatgcaaatgtataagatattaatcacacttaaagtactatgagtgataaaacaactcataacaaaataaattataattacgtaaattttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggaggtagtatgttttattagtcacaatcaattagcctccttttttatgcgcaaaaggctgtggcatgatatgattcactctgtcttgtaggtcaaacagagagtttctatatcatatactagaggaagtcataaaagctggagcaacaacactcaatatcccagacactgttggatacactcttccttatgaatttgggaaactaattgctgatataaaagcaaacactccaggaattgaaaatgccattatttctactcattgccagaatgaccttggtctagcaaccgcaaatacattagcggtactaccttttccttatctctttgatccattatcattggtttaatcatgtcactaatgtgacttaacctttagggcgctcatgcaggagcacggcaattagaggtgactatcaatggtattggtgaaagggctggaaatgcttctttggaagaggtgaactcatatactatgtttatgttgtttgttggtattttgcacatgttcatctaatggtttgcagaagaatgaatgcaagtaatattgatttcctatatatgcaactttttttttaaaaaaaatatatttttcaggttgtgatggcaattaaatgtcgtcgagaactcttaggaggtctgtatactggaatcaatacccaacatatcactatgtcaagcaaaatggtacaattatgtttgttttctttcttcttttgttttttttttatcttttgtctttttcaggtgactggaaatttcatgcacttttgcaaatactctgcttattctaggtacaagagcacagtggacttcatgtacaaccacataaagctattgtcggtgccaatgcctttgcacatgaaagtggaattcatcaggtaactaaatttgcattcttgccgtaatattgccatcaaatttcttgactgggttctctttagtgttgttttggtggtacctcaatttcacatctatctatatttcttgacttttagtgttgcctgggttcttgtttctgtttgccatttatctatattttataactctaaaagtgtttcttgccatcaatttacattttaggactaaggaattgattatcattactttttatttcctatctaaattttggaagtttcagaaatctttctagttgtcagtttgcatatgtgcactaggaaaaagttttgctcacatttttatagtatcacatactgagggaagtcaaattatttttatggatgcctttttttttctcagctccgatgaaatcattttctcatatatgatagatcaatcacggttttatatgaaccttgccttgcatattctcatattaattgtgttggttctaagtgaagtgatcttgatattcacttttgttattctgttttcaggatgggatgcttaagtacaaaggaacttatgaaataatttctcctgatgatattggtctaacacgtgcaaatgagtttggtattgttcttgggaagctcaggtaccatccatacatatgttcccccataatttgatttcttgcaagttgcaacattctccctgagatgttactcgaggagatagtttatctactttatgcactttcagctaatttggtgcaaagtacactttccaactatcaaacacttaaaatgttgaatgaccatatcatatggatactccatgtaaggtctaaattccgagatatgtatgcagatcatgtcacagtacaatttttacttgagaaattgtgtgatgtcatcctttgcttaaagttagtgaatttgctgttgttttttttttaattttttaggttaaacattgctcacttgacattgaggaaagctctacctggcctggtcattttatttagaattatctagttatcatatgttgttctgtacttctctagaataaatgaggttgccatattttttttttcatctttactcttgtatattaggtgaggttgatgcagcaatcctgctcaaatacttacgataggcttgcaattatgacttaaatctgatttgagattatcaactccaagttcataattatgctttcatgtcttcctttttttttcagtggaaggcatgctgtgagatctaaactagtggaggtattggaattgtctttatttttctagttagaattaaatgccttcttttcagttatcgttgctgaacaatactttgtcatccaatatgtagcttggatatgaaatcactgacaaggaatttgaggatttctttaaacgctacaaagaggttgcagagaagaaaaaggtgccagttttcctgagtgctctgttgctcgagtgacatgttcaaccttttttttttgtctgtagagcagaaagcattttgataacttctagcttatgtgctttaaatcattgtagcgtgtaactgatgaagacattgaggcgctgttgtctgatgagatatttcagcccaaggttttttggtcccttgctgatgtacaggtataattttgccacaatttactactttttggctaatggagaagttgatattttaaaattgatatgaagcctttttgcaggcaacttgtggaacacttggtctgtctacagcaactgtcaaactgataggtccggatggagatgagaagattgcatgtgcagttggaacaggtccagttgatgcagcttacaaggctgttgatgatataatacaggtgacagttgcaatattttttattgttcttgcactagtataccagtttatgggatggaatatggatgtgtttattcaatatgtaagaatgaaacatcctgcatctggtaacataacttgcagtatgttgcctctatgataaatatacaagaatcacaagaataggagattcagtacttaacaaggattagcatgcgatgtgttatgacttatgagcatgctttcaacaaaatgagtgcactattttgatgttaacagagaaattacctacatctactggcatgatttgtaaactatctgcattcatttcagtaaaactggagaaattatgaaacatctaagaatcatttgcaattcacagatcccaactgttcttcgagaatatagcatgacatcggtcacagaaggcattgatgcaattgcaactactagagtggttgtcactggagatgtcagcgactctaaacatgctttgactggtcactccttcaaccgggcattcaggtaagtcctttatactacttttttttttcactgggcaccttccttctgtgttgtttccaacatctattattgttattatcaattaaatttttctcatcaactaataatttctttgcctattgacctcagtgggagtggtgccgcactggatattgttgtttccagtgtgcgagcttacctgagtgccctgaacaagatgtccagttttgttggggctatcaaggctagtagtgaagtatctgaaagccaaagagttcaaaccacagaatgagtcttgacgctccttggttttcatatcggatggttctatgtttcacattcccagcaaggagtatgtgcttgttgaaacatggtttttccgtttagtgcatctggaggatgttctgggtttctttggtggagcctgacttaaggttgaacatccaggaagttttggggtatgtagtgtataattcatatttgaaaattgtatttccaataagacaataataaataattgtttgacatatgagtattgc</dnaseqindica>|
 
−
Link = [http://www.ncbi.nlm.nih.gov/nuccore/NM_001072648.1 RefSeq:Os12g0138900]|
 
−
}}
 
−
[[Category:Genes]]
 
−
[[Category:Japonica mRNA]]
 
−
[[Category:Oryza Sativa Japonica Group]]
 
−
[[Category:Japonica Genes]]
 
−
[[Category:Japonica Chromosome 12]]
 
−
[[Category:Chromosome 12]]
 

Latest revision as of 03:35, 15 May 2015

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information