Difference between revisions of "Os12g0105300"

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(Structured Information)
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</references>
 
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== Structured Information ==
 
{{JaponicaGene|
 
GeneName = Os12g0105300|
 
GeneID:9268278|
 
Length = 8411  bp|
 
Definition = Oryza sativa Japonica Group Os12g0105300, complete gene.|
 
Source = Oryza sativa Japonica Group
 
 
  ORGANISM  Oryza sativa Japonica Group
 
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
 
            Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
 
            clade; Ehrhartoideae; Oryzeae; Oryza.
 
|
 
Chromosome = [[:category:Japonica Chromosome 12|Chromosome 12]]|
 
AP = Chromosome 12:259563..260472|
 
CDS = 40138313..40138869,40138972..40139293,40140765..40141055|
 
GCID = <gbrowseImage1>
 
name=NC_008394:40138313..40141055
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage1>|
 
GSID = <gbrowseImage2>
 
name=NC_008394:40138313..40141055
 
source=RiceChromosome01
 
preset=GeneLocation
 
</gbrowseImage2>|
 
CDNA = <cdnaseq></cdnaseq>|
 
AA = <aaseq></aaseq>|
 
 
DNA=
 
<dnaseqindica>
 
 
GCAAGCCACA TGTTCTAGTG GCTTTCACAG TTTCACTCAT TCCAAGGCAA CGAGCTGGAG CTCTCCTCCT CCAATGTATC
 
TATCTATCTC TAGCCCAAGA TATATCTGGC TTGCCATTCT CATAGCTTGC CAGTTTCTGA TGAGCCAAGG GAGCTCTGTG
 
CGTCGTCAGC TCTCCTGCCC GGGACAGTGA TGAGGGCAAG GAGCCATGCT TGTCAGGTTA GGCGTCGTTG TTGTAGCCTC
 
CGTCGCAGCT TTAACTCTTA AGAGAGCCAA CAGTGGCAAC AGAGGTACTA TACTTGCTTC TCTCTTGCAG TGGCACTTCC
 
TTCCTTAATT TGTTCCTCTG AATTTCTCAC TGAAGCTCTT GTTGAACTTC AACAGATGGC CAAGCAAGGA AAGGAAAGGA
 
TAAAACTCGC TACTCTGAAC ATGTAAGTGC ATGCCATTCT CTACTAGCTT AGAACTTGTG AGTTTAACTG TAACTGTTCT
 
GAACACGTAT GCGTTTAACT GTTCTTTTCA ATTGCTGTGG TTCAGGGGGA GAAAGAAGAA GAGAAGGAAG AGGTTAAAAC
 
AATCAGCGGC ATAATCAATT CAGCTCTTTC AGATGATGAC GACATGCTCT CCGAGATCGA GAGCCTCCTA TCAGGGGAGA
 
TTGACATCCC CCTACCAAGT GACAGGTTCG ACGTCAAAGA ACGCTCTCGG TACAACAGTG TTAACTCCGA GCTGGAGAGG
 
CTGCGTGGAC TTGTGCGTGA GCTGGAGGAG AGGGAAGTGA AGCTTGAGGG AGAGCTGCTA GAGTACTATG GCCTCAAGGA
 
ACAGGAGACT GATGTTGTAG AGCTACACAG ACAGCTCAAG ATCAAGATGG TGGAGATCGA CATGCTCAAA ATGACCATCA
 
ACTCGCTGCA AGAGGAGAGG AAGAAGCTGC AGGATGACGT CGCCCGTGGC ACAGGAGCCA AGAGGGAGCT GGAGGCTGCG
 
AGGAACAAGA TCAAGGAGCT GCAGCGACAG ATACAGATGG AGGCGAACCA GACAAAAGGG CAGCTGTTGC TTCTAAAGAA
 
CCAGGTGATT GCGCTGAAGT CCAAGGAGGA GGAGGCAGCC ATCAAGGACG CAGAGGTGCA GAGGAAGCTG AAGAAGCTCA
 
AGGAGCTGGA AGTGGAGGTA GTTGAGCTGA GGAGGAAGAA CAAGGAGCTT TTGTATGAGA AAAGGGATCT CATCGTAAAG
 
CTGGATGCAG CACAAGGAAA AATAACAGAG GTATGATATT AGTATCATTT TCACTCAGCA ATTATATGCT TCTAAAGCCT
 
CACATTTGCG TGGCATCATT TGCAGCAGCA ACAGTTGTTT TTAATGTTGA CATATTTTTT TCATGATTTA TGTGGCATGC
 
AGACAGCTGG TTGCTGTCCT ACATTTTCAC ATTAAGAAAA ATAGGCACAA AATGATAGGC TTTATTTTTT TTTCTTCTTC
 
TTTTAATTTT CCCTTGGGAT TCCATCAATC AATTTCATGA CAAGGACTCA GAATTTAGAC TTTCCTCTCA CATTATCAAC
 
ACTGAATATA Tttttttttg agggaaacga cggcaggaga gctgccggaa tttaattgat aggagaaaaa aaaaaaactt
 
acagtcccag aaacaaaaag gaaatcaagg aggactaaaa gcagtcctcc gcaaatctag gtcctgctta acaaagtatg
 
ctacttggaa cgaagtacaa gtggtattgt gaaaaattct cctatttctt tcaagccaaa cattccacca agtggttaac
 
aaaactcctc taatatcctg cttttggatt gctgagcctt gtcgattgat atcctcccac caagaagcga tcccagccgg
 
ctgtgaatta gaaactagca aattatgcca actgtgaact agtgcccaaa cttctttaaa aaaggagcat tcgcaaaaaa
 
gatgattagt gtcctcaaag gcatcggtgc aaagacagca gatccaattg caaggccaat gtctctgaag gaggttctga
 
gccgttagag ttttgtggtg aagaataagc catcccaaag acctcatttt aggttcagct ggcgccttcc aaagagagac
 
aaaatccaaa cgagtgaaag aaccttcaaa ttggtaagaa tatgcacttt tacttgagta gcaacctgcg gagttccaat
 
tccaggttat atcgtcggca ctttgtgata gatgaaaatc ttgaagcatg cctcccagcc gcacgaggtc gtggatctct
 
tcgattgacg agaattgcct gaaggagaga atccagttgt ttgatgaaac ctctaactga acatttcttt gtttcctttt
 
tgctagctga aaacaaagag gggcaatatc tttagggcag cagccttgaa gccaatgatc atgccaaaaa cttgtttttg
 
ctccgtcgcc cactgcgatc gtagttgctg cttggaacaa ccttttatcg atatcatcac aaggcagatt cataccagcc
 
cagggtttgt cctcgtcttt ccatttaagc cacagccatt gagacggaga gctctagaaa atttttccaa atcaaggagt
 
cccaatcccc ccaaagattt tggtctgcac actgtctgcc agtttaccaa acagctgcct gggtttgaat ggtctgggtc
 
ctcgcccttc cagaggaaag atcttcgaaa cctatcaatt ctcttgaaaa cccactttgg catttggagg gccgaaagat
 
ggtggattgg cattgagcta agaaccgttt ttaccagggt ttcgcgaccc gaagaggaga aaaaccttcc tttccaagta
 
gggagtcgtg aaccaatttt ctcaattaag gggagaaaat caattttcct caattttcgg tagtggagtg gcaatccaag
 
ataacgacag ggaaaggact taattgtgcc tgggaagatt tgcaacaaag gagctagatc aattccttca catctaatag
 
gaaaaatttc agttttggca acatttgtgt ggaggcctaa aacttgcgcg aagaaattta gaagctttga aagggtggtg
 
agctctgtcg catctggtct tgtgaaaaca gctacatcat cagcatataa agagcaacgg aacctgttgc ggttactctc
 
taacggagaa aggatggaag caccttcggc cgctttaaga atccagtgga agggttccat ggcgagaata aagagcattg
 
gtgacagagg atcgccctga cgaagacccc tcgcatgagg aattggttgt cccggtgcac cattgagaag gacctgggac
 
gaagaggtgg caaaaaggtt gcagatccaa ttgagccaac ggttgccaaa gccgaactgt cgaagaacat caaggaggta
 
aggccagcac accatatcga aagctttggc aatatcaact ttaatgaaca aactctgttt tcttgtcctg tgtaagcgct
 
gaaccaagtt ttgaacaaaa atgaaattat catgaattgc tctttttcgc acaaaagcat tttgattttg agagatcatc
 
tcgtttagtc tcagtgcaag acgatttgct aacactttgg tgattatctt ggtaaaactg tgtacgaggc taataggacg
 
aaaatgatca gcacctgaag cgtcatcttt ctttggcagc agaaagatgt aggccgaatt tagctcctca agatgtgaag
 
tgcttaggtt catgaaggaa gtcaccgctg ctagaaggtc acctttgatt atttcccagg caactttgaa aaaagctcca
 
atgaaaccat ccggacctgg agccttttcg ggaggcatgc caaaaatcgt tcctctaagt tcctcttccg agatgtcttc
 
ctctagctcg gacagattaa aagaaggcag ttgcaaattg gtccaattca gattcttcgt cctttgaaaa tttgtcccca
 
atttctcact atagaatcta aacaactcat cttctttatc cttggctgaa actgctaagc ctgatggagt tttcagtgat
 
tggatgaagt tctttctcct ccttgaggtt gcttttatat ggaagaactt ggaatttaca tcaccctcct taatccatgt
 
taacctagaa cgttgcctga tctttaactt attcagaacc gagaggccca aaatacgtgc tttgaggttt gagtatagct
 
gccgctcatc attggttaaa actcttgact cctgtgccac gtcaagttga aagacaactt ccatcgccac tgcaagctgt
 
agcgtaatat cccccacctg actgcgattc catctcttaa gatcacgggc aagacgacga agttttaggc tgaaagtagc
 
gagacagttc gtggctagta tcggcttgtt ccaagattct tgcacaacat ctaggaaacc tggaattctt aaccaatatg
 
cctcaaatct aaaactgggt ggtctacctc ttttgtcatt accgattagg aaaagaggag catgatctga gcatgctgaa
 
gagagagggt aAAGGATTGA ACCGCTGAAT ATTATCCATT GGACTAGACT TGCACACACT AGCATTGGTT TAACTGAAAA
 
ATCCCTTGCC TATTCAATAA TGCATAGCTA TATTAAGAGC TAAACTTATA TTTCAAAACC ACATCATAAT TTCACACTGC
 
TTCTCTCAGA AAAGGAAGAA TGAACTAGCA ATAGATATTT TTATTATGTT CATTTTCAGC ATATACAGAT ATATTAATAA
 
CAGAGCTTAT CATTGTGCAG AGTGATGTAG TTTCCCATGC AAGAGAGGAG ATCAACAAGC TGAGGCATGC AAATGAAGAC
 
CTTACCAAGC AAGTAGAAGG CCTACAAATG AACAGATTCA GTGAAGTAGA AGAGTTGGTT TACCTGCGTT GGGTTAATGC
 
TTGTCTGAGA TATGAGCTCC GCAACTACCA GGCACCGTCT GAGAAAATTT CTGCTCGTGA CCTTAACAAG ACCCTGAGCC
 
CAAAATCGCG TGAGAGGGCC AAACTTCTAA TGCTGGAATA TGCAGGATCA GAACGAGGAC AGGGCGACAC TGACCTTGAA
 
ACTGCTTCTT CTGCACCTTC TTCACCCAGA AGCGAAGACT TCGACAACGT TTCAGTTGAC AGTTCTTCTA GCAGATACAG
 
CTTCTTTGGC AAAAGGCCCA ATCTGATGCA AAAGCTCAAG AAGTGGGGAA GGGGCAAGGA TGACGGAAGC AGCTTAGCTT
 
CACCGACACA GTCCTTCACT AGTGACTCCC CAAAGAGCGC CAGCCAGAAA CCAAAGGGGC CCCTAGAGGC TCTCATGCTC
 
AGAAACGCAG GAGATGGTAT GGGCATTACA ACCTTTGGAA AGAGGGAACA AGATCCCAGT GATATCATGG ATGAGGCAAA
 
TGTTGCATCT TCATTTCATT TGATGTCAAA GACTGTACAA GGTTTTGCTG ATGACAAGTA TCCCGCTTAC AAAGATAGGC
 
ATAAACTCGC CACAGAACGG GAGAAGGCAA TAAAAGAGAA GGCCGAGAAA GCTAGGGTAC AAAGATATGG CGGTGTCAAC
 
AGTTCAGGTA TTGTGCCATC TCCAAGATCT GCACTCCCTC CAAAACTTGC TCAAATAAAG GAAAAGGCTC CTACAGCTAA
 
TGCTGAATCC AGTGACCAAC CTAGTGATAA CCAGAACAAC CCTCTAGTTG TGACACAACT GAAACTTGCA AATATTGAGA
 
AGAGAGCTCC AAGAGTTCCT AGGCCACCTC CTGCACCATC AGCCACTGCC AACACTGCAA GTGCGTTACC TCCACCACCG
 
CCACGCCCGC CAGGTGCACC TCCTCCACCA CCGCCTCCTG GCAAACCTGG TGGCCCGCCA CCGCCGCCAC CACGCCCTGG
 
TTCCCTACCT AGGAATCTTG CTGGTGGTGA CAAGGTACAC CGTGCTCCAG AGGTTGTAGA GTTCTATCAA AGTCTCATGA
 
AGCGTGAAGC CAAGAAGGAC ACAACTTCTC TGGGATCAAC AACATCAAGT GTCTCTGATG TGAGAAGCAA CATGATTGGA
 
GAGATTGAGA ATAGATCAAC ATTCCTCTTA GCTGTAAGTT ATTCAAGATG ATGCTACCTT TCAGAAATAT ATACTACTGA
 
ATTCCTTTAG TCCACTGCTA ATTCAGGTAG ATTATTATGA GGACTTACTT TTTATATAAA AAAATGGATT TGTTTCAGGT
 
CAAAGTGGAT GTGGAGACAC AAGGAGACTT TGTTGAGTCT CTAGCAAATG AGGTCCGAGC AGCTAGTTTT GTAAATATCG
 
ACGACGTTGT TGCATTTGTA AACTGGCTTG ATGAGGAACT ATCCTTCTTG GTAAGCTTAT CTATTTTTTT TTCAATGCAA
 
CACATGACAA AATAGTTAGT ACTGAAAAAG GGTCAAATAA CGTTTTAGGT CGATGAGCGG GCAGTACTAA AGCACTTTGA
 
TTGGCCAGAG AGCAAAACTG ATGCACTAAG AGAGGCAGCC TTTGAGTATC AAGACCTGCT AAAATTAGAA CACAAGGTTT
 
CGTCGTTTAC TGATGATCCA AAGCTTGCAT GTGAAGAAGC TCTCAAGAAG ATGTATTCCT TGCTTGAAAC GTAAGCATCT
 
CCTCTGAACC ATTCTTCTCC CAAATTACAT GGTTCCTCAG AGTAAGATAA TAAATATCTT GTCAAGTCCA ATTATCTTTA
 
GCAAGCATAA GCATTTGATG TTTAATTGGA CTAACAAGTA TCATACTTAT GTCAGAGTGG AGCAGAGTGT TTATGCGCTA
 
CTTCGTACTA GAGACATGGC CATATCACGC TACAGGGAGT ATGGAATACC GGTGGATTGG CTGTCTGATT CCGGGGTAGT
 
TGGCAAGGTT AACATACATC TCTAGCCTCT ATCTATTGCC ACTTTGTTAG ACCATGTAGG AAATCTAAAA TCGAAATTCC
 
ATCTTGTTAT GTTGGGAATA GATCAAATTG GCATCTGTTC AGCTGGCGAA GAAGTATATG AATAGGGTTG CCACAGAGCT
 
AGATGCCTTG CAAGGCACCG AGAAAGAGCC CAACAGAGAG TTCTTGCTTC TTCAGGGTGT GAGATTTGCT TTCCGAGTTC
 
ATCAGGTATA ATTCATGGGC ATATATACGA TGGTGTTGAT TAATCTGAAC TAACATGATG GTGTTGATTA ATCTGaacta
 
gcatgatggc ccgtgcagat tgcgcggcta gcatcattat attttctctc atataatagc atatatgttt tttttaatgt
 
attattcaaa tatattaaaa tagcaacata attttaaatt ttatactaac tttatgaaac tactaatgtg taatattaat
 
attgtatttt atatacgtgt tagttattaa ttatttttaa tatcagattt tagttatttg taaattatat tcctatatga
 
actctagact cgtctttcaa tatttatttt ttttaattcc gaattttcgt tatttgtaaa ttgtatttct atatagactc
 
taggctcttc ttccaatatt atttattttt aattctgaat ttttattatt tctaattgta tttctatgtg gactataaat
 
tcatcttttg ataatcttta atttttaatt ttgaatttca gttacttctg aattgtattc ctatattgac tttagactct
 
tcttcccatt ttttaatttc gaattttagt tatttttaaa ttgtattttt atacgaactc taaactctac ttttaatttt
 
attatgttta ttctgaattt tagttagttt taaattccta tatggactct ataatctact tctaatattc cttattttta
 
attctgattt tctattactt ctcaattgta ttttcatatg gactctatac tctacttcta atactcctta tttttaattt
 
cgattttcta ttacttctta attgtatttc tatatggact ctatactcta cttctaatat tccttatttt taattccgaa
 
tttctgtttt ttcttaattt tattgctata tgaattctgc ttttcttttt ctccgattaa tatgagaatt tctaggccat
 
aagagagaac gtggatgctc ctttttttat tcctttaata agttaataga ttgaGAAATT GAAATTTATC TACTTGACAA
 
CTTATTCTTT TCTGACATAA GACAACTTAT TCTTGTGTGT TGTATAGTTT GCCGGAGGCT TTGACGAGGA AAGCATGAAG
 
GCGTTTGAAG AGCTAAGAAG CAAGATGTGT ACAACACAGA CATCTGCTCC ACAAATTTCA TAGCTCTAAC CATGCATGCT
 
GCATTCCACA GTTGACTGGT TTATTTTCTT TGTTGAAACT TGAAAGGCAA GATTAATTGA GTGGCTAAAA AGTAGAAAAA
 
TACAAGTGTA AATCCCAATA TGGCAGGAAA GGATGATTAA GTGTACAGAC GATGAATACA TGCATACTAG ATTATGTATT
 
TCTTTGTATT T</dnaseqindica>|
 
Link = [http://www.ncbi.nlm.nih.gov/gene/9268278]|
 
}}
 
 
[[Category:Genes]]
 
[[Category:Genes]]
 
[[Category:Japonica mRNA]]
 
[[Category:Japonica mRNA]]

Revision as of 04:30, 12 June 2015

Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)

Annotated Information

Function

Actin-binding FH2 domain containing protein. (Os12t0105300-01); Actin-binding FH2 domain containing protein. (Os12t0105300-02)

Evolution

This gene is conserved in Arabidopsis (47% identity) and pea (50% identity). GA20ox-2 shows 47.8% identity to GA20ox-1 in rice. There are at least three GA20-ox genes in Arabidopsis [1][2].

Knowledge Extension

References

  1. The Rice Annotation Project Database (RAP-DB): 2008 update. Rice Annotation Project, et al. Nucleic Acids Res, 2008 Jan. PMID 18089549,
  2. Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana. Rice Annotation Project, et al. Genome Res, 2007 Feb. PMID 17210932,