Os05g0489900

The rice Os05g0489900 was reported as OsCCaMK in 2014 by researchers from Japan.

Annotated Information

Figure 2. CH 4 flux and CH 4 concentration in soil water in WT and NE1115 plants under LN and SN paddy fields..

Gene Symbol

• Os05g0489900 <=> OsCCaMK,CCaMK

Function

• OsCCaMK is required for fungal 29 accommodation in rice roots
• CH4 oxidation and N2 fixation were simultaneously activated in the root zone of WT rice in the LN field, and both processes are likely controlled by OsCCaMK.

Phenotypic analysis

• The researhcers report the effect of a Tos17-induced OsCCaMK mutant (NE1115) on CH 4 flux in low-nitrogen (LN) and standard-nitrogen (SN) paddy fields as compared with wild-type (WT) Nipponbare. Growth of NE1115 was significantly decreased compared with that of WT, especially in the LN field. The CH 4 flux of NE1115 in the LN field was significantly higher (156–407% in 2011 and 170–816% in 2012) than that of WT, although no difference was observed in the SN field.
• The copy number of pmoA (encoding methane monooxygenase in methanotrophs) was significantly higher in the roots and rhizosphere soil of WT than those of NE1115.
• However, mcrA (encoding methyl coenzyme M reductase in methanogens) copy number did not differ between WT and NE1115.

You can also add sub-section(s) at will.

Labs working on this gene

• Graduate School of Life Sciences, Tohoku University, Katahira, Aoba-ku, Sendai, Miyagi 980-8577, Japan
• National Institute for Agro-Environmental Sciences, Tsukuba 305-8604, Japan
• Graduate School of Agricultural Science, Nagoya University, Furocho, Chikusa, Nagoya 464-8601, Japan
• Memuro Research Station, National Agricultural Research Center for Hokkaido Region, Shinsei, Memuro-cho, Kasaigun, Hokkaido 082-0081, Japan
• Department of Plant Sciences, National Institute of Agrobiological Sciences, Tsukuba 305-8602, Japan