Difference between revisions of "BGIOSGA001117"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA001117|
Description = Akt1-like potassium channel|
Definition = Oryza sativa Indica Group BGIOSGA001117, complete gene.|
tag = |
tid = BGI...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA001117| | GeneName = BGIOSGA001117| | ||
Revision as of 18:08, 20 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA001117 |
|---|---|
| Description |
Akt1-like potassium channel |
| Definition |
Oryza sativa Indica Group BGIOSGA001117, complete gene. |
| LocusTag |
' |
| Ensembl Transcript ID |
BGIOSGA001117-TA |
| Ensembl Protein ID |
BGIOSGA001117-PA |
| Length |
5807 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:29337709..29343515 |
| Sequence Coding Region |
29343250..29343515,29341422..29341787,29341185..29341242,29340782..29341099,29340436..29340681 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome01:29337709..29343515 source=RiceIndica01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome01:29337709..29343515 source=RiceIndica01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGGCCGCAACCGGAGCCTCCGCGCCAGGCGACAGCAGTTCGAGGCCAGCGAGGTGAGGCAGGACGGGCGCAGCAGGATGATGCCCGCGTGCGGGCCGTGGGGGGCGGGCCATGGCGGCGGGGACCCGGCGCTCGAGAGGGAGCTGTCGCGGGACGGCAGCCACTACAGCATCTCCAGCGCCATCCTCCCGTCGCTCGGCGCGCGGAGCAACCGCCGCATCAAGCTCCGCCGCTTCATCATCTCCCCCTACGACCGCCGATACAGAATCTGGGAGACTTTCCTCATAGTTCTTGTAGTCTACTCTGCGTGGGTCTCACCATTTGAATTTGGCTTCATTCCGAAGCCTACGGGGGCTCTAGCTACAGCCGACAATGTGGTGAATGCATTCTTCGCGGTTGACATCATTCTGACCTTCTTTGTGGCTTATTTGGATAAAATGAGCTATATGCTTGAAGATGATCCAAAGAAGATCGCATGGCGTTATAGTACCACATGGCTTGTTCTTGACGTGGCCTCCACCATCCCATCAGAATTTGCTCGCAGGATACTACCTTCAAAGCTTAGGTCATATGGATTTTTCAACATGCTTCGTCTGTGGCGTCTCCGCAGAGTCAGCTCTCTGTTTTCTAGGTTGGAGAAGGATAGACACTTCAATTACTTCTGGGTTCGATGTGCAAAGCTCATTTGTGTCACACTTTTTGCTGTGCACTGTGCGGCATGCTTCTACTATCTTCTTGCTGATAGGTACCCCGTCCCAACTTCTACGTGGATTGGCAATTACATGGCAGATTTCCATGAACGGAGCTTATGGATTCGCTACGTAACATCAGTCTATTGGTCAATCACCACTCTTACCACCGTGGGCTATGGGGATCTACATGCAGAAAATACAAGGGAGATGATCTTCAACATTTTCTACATGCTCTTTAACCTTGGTTTGACCGCTTATTTGATCGGTAACATGACCAATTTGGTTGTCCATGGCACTAGTCGTACTCGAAACTATAGGGATACAATCCAAGCAGCAACAAGCTTTGGAGTAAGAAATCAGCTACCACCTCGGCTGCAAGATCAGATGATTTCACATATTAGCTTAAAATACAGGACAGATTCAGAAGGTCTTCAACAACAAGAGATCCTTGATTCACTGCCTAAAGCTATTAAATCTAGCATTTCTCAATATCTGTTCTTCCATCTGGTTCAAAATGTTTACCTGTTTCAAGGAGTCTCAAATGATCTGATTTTTCAACTGGTTTCGGAGATGAAAGCTGAATATTTTCCACCTAGGGAGGATGTGATTTTGCAGAATGAAGCACCCACTGACTTCTACATCTTAGTTTCTGGTAGTGTGGTGATACAAGTGGCTACGTCAGGAGAAGTTGTTGGAGAAATTGGGGTTCTTTGCTACAGACCTCAGCTATTCACAGTTCGAACAAGATCCTTGTGCCAGTTGTTGCGTTTGAATCGTACAGCTTTTCTCAGCATTGTTCAATCCAATGTTGGGGATGGAACTATCATAATGAACAACCTTATTCAGTTCCTTAAAGAGCAGAAGGAGAACAGTGTAATGGCTGGTGTCGTAAAGGAGATAGAGATAACTAGAGGAGATGATTTTTTGTTGCATCAACTTCTTAAGCGTGGTATGGATCCAAATGAGTCAGATAATGACGGGCATACCGCACTGCATATAGCTGCTTCCAAAGGAAACGAGCAATGCGTCAGGCTTCTATTAGAATATGGAGCTGATCCAAATGCCAGAGACTCAGAAGGAAAAGTTCCACTGTGGGAAGCGCTGTGTGAGAAGCACGCCGCCGTCGTGCAACTATTAGTCGAAGGCGGCGCGGATCTGTCGTCGGGTGACACGGGCTTATACGCTTGCATCGCCGTGGAGGAGAGCGACACCGAGCTGCTCAACGACATCATTCACTACGGAGGCGACGTGAACAGGGCTCGCCGGGACGGGACCACCGCCCTGCACCGCGCCGTCTGCGACGGCAACGTCCAGATGGCCGAGCTCTTGCTGGAACACGGAGCCGACATCGACAAGCAGGACGGCAACGGCTGGACCCCGAGAGCCCTCGCCGAGCAGCAGGGCCACGACGACATCCAGCTCCTGTTCCGGTCGCGCAAGGCGGCGACGGCGAGTGGCCACCATCACGTCCCAAGCTCCACCACCACCAGGGTGGCGCCGGCGGCGGCGGCGGCATCACTGATCGGGAGGTTCAACAGCGAGCCCATGATGAAGAACATGATCCACGAAGACGCCGACCTGCCCAGCCGGGTTCTCCCCGAGAAGCTCCGGAGGAAGCGGGTCACCTTCCAGAACTCCCTCTTCGGGGTCATCTCGTCGTCGCAGGCGCAGCGGGAGACCGACCACCCGCTCTCGAGGGGTGGCCTCGCGGCGACGGGCTCCCCGAACCCGAGCAGCGGCAGCCGCAACGCCGTCATCAGGGTGACGATCAGCTGCCCCGAGAAAGGGAACACCGCCGGGAAGCTCGTGCTCCTACCTCAGACGCTGGACATGCTCCTCGAGCTCGGCGCCAAGAAGTTCGACTTCGCGCCAACCAAGGTTCTCACCGTGGAGGGCGCCGAGGTTGACGAGGTGGAGCTCATCAGAGACGGCGATCATCTTGTGCTCGTCAGTGATGAATGGGATGCAGAGAAGATGAAATGCAAGAGCTAG</cdnaseq> |
| Protein Sequence |
<aaseq>MGRNRSLRARRQQFEASEVRQDGRSRMMPACGPWGAGHGGGDPALERELSRDGSHYSISSAILPSLGARSNRRIKLRRFIISPYDRRYRIWETFLIVLVVYSAWVSPFEFGFIPKPTGALATADNVVNAFFAVDIILTFFVAYLDKMSYMLEDDPKKIAWRYSTTWLVLDVASTIPSEFARRILPSKLRSYGFFNMLRLWRLRRVSSLFSRLEKDRHFNYFWVRCAKLICVTLFAVHCAACFYYLLADRYPVPTSTWIGNYMADFHERSLWIRYVTSVYWSITTLTTVGYGDLHAENTREMIFNIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRNYRDTIQAATSFGVRNQLPPRLQDQMISHISLKYRTDSEGLQQQEILDSLPKAIKSSISQYLFFHLVQNVYLFQGVSNDLIFQLVSEMKAEYFPPREDVILQNEAPTDFYILVSGSVVIQVATSGEVVGEIGVLCYRPQLFTVRTRSLCQLLRLNRTAFLSIVQSNVGDGTIIMNNLIQFLKEQKENSVMAGVVKEIEITRGDDFLLHQLLKRGMDPNESDNDGHTALHIAASKGNEQCVRLLLEYGADPNARDSEGKVPLWEALCEKHAAVVQLLVEGGADLSSGDTGLYACIAVEESDTELLNDIIHYGGDVNRARRDGTTALHRAVCDGNVQMAELLLEHGADIDKQDGNGWTPRALAEQQGHDDIQLLFRSRKAATASGHHHVPSSTTTRVAPAAAAASLIGRFNSEPMMKNMIHEDADLPSRVLPEKLRRKRVTFQNSLFGVISSSQAQRETDHPLSRGGLAATGSPNPSSGSRNAVIRVTISCPEKGNTAGKLVLLPQTLDMLLELGAKKFDFAPTKVLTVEGAEVDEVELIRDGDHLVLVSDEWDAEKMKCKS</aaseq> |
| Gene Sequence |
<dnaseqindica>1..266#1729..2094#2274..2331#2417..2734#2835..3080#3176..3274#3552..3737#4167..4224#4276..4364#4462..4537#4885..5807#ATGGGCCGCAACCGGAGCCTCCGCGCCAGGCGACAGCAGTTCGAGGCCAGCGAGGTGAGGCAGGACGGGCGCAGCAGGATGATGCCCGCGTGCGGGCCGTGGGGGGCGGGCCATGGCGGCGGGGACCCGGCGCTCGAGAGGGAGCTGTCGCGGGACGGCAGCCACTACAGCATCTCCAGCGCCATCCTCCCGTCGCTCGGCGCGCGGAGCAACCGCCGCATCAAGCTCCGCCGCTTCATCATCTCCCCCTACGACCGCCGATACAGGTTAGTTCGCAACCTTCTCTGTCTCTCTCTTCCCTATCGCCATCACAACTCTCGCCGCTGCTTTGTTTCAGATTTTTTTTTTCTTGCGCAGTCTCTTGTGTACAGTCCTGCTATACTGGCTGCATTACAGCTTTAATTTTGGTGATGGTCAGCGCAGAAGTGCTTTATTTTTGTATTCATAGTTGGCACTGAATTGGTTCGTTCTGCCTCTTGTTAATTCCAATGAGTTATTATATGTTGTCACGAAATAGATGGGTTGCTCATGAAATTTTGTTTTTTCTCCCTCTGTTTTAATGGCTGCTTTGCTGCCGCAATTGTCAGCAAATTGTCTTTAATGTGTTTTCGCGGAAGTGAGAAGTAGAGGTTTTTGTTTTTACTGTTCCTGGTTTGACCTCGACTGAATAATTGATTTGTCTATTTCTTGCTTTTTATAGTACTCATTATCTCCGTTTTAATATGGCTAATTCTATGGCTTGTGAGTGCTTTATTTAGTTATTCGATTTTCTTTTCCTTGAGGAACGACAAGAAAAGCGTGATTTTGATGCTGACGTTCCTGGATTTCTAGTACTCCCGTTTTGCGCTTCTTTACGCAATGCTTCGTTGTCGAAAGAGCTCTCTCACGGAACTCGCATGGAAAACTTTTTTTCTGATTTGTTTACTGCAATTATTTGCCGTTGGACGGACGAGGATTAATAACCTTGTATTTTAGTTATGGACTTAGTGGTTTTACGAATTGTTCAGATTACCTTTTTTGTCGGCCTCAATGACAGTCTTCTGCAATTTGAAGTTATTCTGTGCTATCATTCAATTAATATATTTTTTTGTCTAGTGAGAGTTCTGTTGTCCATTTATTATTTGATAGTATCATAAAATCGCATTACATTAATCTCCATTTTTCTTCGGATCACTCTTTCGGAGATAATCTTGTATACACAGTATACAGTAAGTAGTACGGTAGTTTCTGTGGTACTTCTAGTTGCCACTTGCCACCGAGTTACGGCCAGTACATATACAGTACCGTTGAATAAACAGAGATTACTTGTACAGGAATAAGAAATCACGGAACTTTGAACGAAAGTCCATCTAATACCCTAAACTTTAAAACCGAACATCTAACTCCCTAAAGTTTGCAACCCCTGCAGTGGTTTCGATTTTTGAACAGTGGTTTCGTGTATTTGGATGCTTATAATGACTAAGATGACATATTTGTATTTCGTCATTCCTTGGCCGCAAGTTATATTATATTATGATGTTATGCATATAATGCTAGTGTATGGATTTCACAATATAAATATCTTCCATTCATGGTTTAGGGGGTATATGGACTTCTTCCTACAGGAATATATTGTTTTTTCCTTTGTAAGCATGGTGTTTTTGCTAGTATGAAAAGCAAATAGAAACTTTGTAATATTGAAATCAGAAGAATGAGTAATTCTAACATTTAATTGTTAATACTATGCAGAATCTGGGAGACTTTCCTCATAGTTCTTGTAGTCTACTCTGCGTGGGTCTCACCATTTGAATTTGGCTTCATTCCGAAGCCTACGGGGGCTCTAGCTACAGCCGACAATGTGGTGAATGCATTCTTCGCGGTTGACATCATTCTGACCTTCTTTGTGGCTTATTTGGATAAAATGAGCTATATGCTTGAAGATGATCCAAAGAAGATCGCATGGCGTTATAGTACCACATGGCTTGTTCTTGACGTGGCCTCCACCATCCCATCAGAATTTGCTCGCAGGATACTACCTTCAAAGCTTAGGTCATATGGATTTTTCAACATGCTTCGTCTGTGGCGTCTCCGCAGAGTCAGCTCTCTGTTTTCTAGGTATGTTTTTATCGTGCACATATAGAAGATTCTATGATATACATTCTGTTTTGGGGTCCAACATTTCAATCTGAACCTGACTGAACTCGGTTAAAACATAGTATTAATTAGGCTAGAGCCACTGCCATTTTTGCCTTTTCAATTTGTGTAGTAAACTTAACACTTTTCACTTTTTCTAGGTTGGAGAAGGATAGACACTTCAATTACTTCTGGGTTCGATGTGCAAAGCTCATTTGTGTAAGTGACTGTATTTATGTTATTTTCCTGTGAAGTTTTAACATTTTTGTGGAACATCCCATTTTCTCATCCTTTGATATTGCAGGTCACACTTTTTGCTGTGCACTGTGCGGCATGCTTCTACTATCTTCTTGCTGATAGGTACCCCGTCCCAACTTCTACGTGGATTGGCAATTACATGGCAGATTTCCATGAACGGAGCTTATGGATTCGCTACGTAACATCAGTCTATTGGTCAATCACCACTCTTACCACCGTGGGCTATGGGGATCTACATGCAGAAAATACAAGGGAGATGATCTTCAACATTTTCTACATGCTCTTTAACCTTGGTTTGACCGCTTATTTGATCGGTAACATGACCAATTTGGTTGTCCATGGCACTAGTCGTACTCGAAACTATGTGAGTTCTTTTTGTTCAACCTTTGGTTGATACTTGCATCTAACTGCTCTTTTAAAGTTTGATTCTAACAAGTAGTGTTTGTTATGTTTTGTACTAAAAGAGGGATACAATCCAAGCAGCAACAAGCTTTGGAGTAAGAAATCAGCTACCACCTCGGCTGCAAGATCAGATGATTTCACATATTAGCTTAAAATACAGGACAGATTCAGAAGGTCTTCAACAACAAGAGATCCTTGATTCACTGCCTAAAGCTATTAAATCTAGCATTTCTCAATATCTGTTCTTCCATCTGGTTCAAAATGTTTACCTGTTTCAAGGAGTCTCAAATGATCTGATTTTTCAACTGGTAAGGATAGAGTTCTTTCTGTAGCTGTGTTTTTGTAGTTGCGTACTGTTACAGAATATGCTTATCTGGTTCTTTTACTTGATTTCGTTTTTGAGGTTTCGGAGATGAAAGCTGAATATTTTCCACCTAGGGAGGATGTGATTTTGCAGAATGAAGCACCCACTGACTTCTACATCTTAGTTTCTGGTAGTGTGGTAAGAATACTCTTTAATAACTACTTTGTTATTTCCAAGTTGATATAATACTAAGCTTCAGAGAGTGCAGTTGAAAAAGTAGGAGTAATTGAGCTATCAGTACTGATATCAGTTTTAGTTATATAAATGGTCATTCTGAAATTCGAGTCACTTTTGCAGGAGTTAGTAGAGCAGCAAAATGGTGCAGACCAGGCAAGACTTCTGTTGCTTTGAGACTTAATTCCAAGTGAACTCGTGCATCAATTGGTCCTAAATATGATAACTTGGAATTCTGCAGGTGATACAAGTGGCTACGTCAGGAGAAGTTGTTGGAGAAATTGGGGTTCTTTGCTACAGACCTCAGCTATTCACAGTTCGAACAAGATCCTTGTGCCAGTTGTTGCGTTTGAATCGTACAGCTTTTCTCAGCATTGTTCAATCCAATGTTGGGGATGGAACTATCATAATGAACAACCTTATTCAGGTCTACCATTTATTTGTTGGTCTCTTCTCTGTAACATTTATCGCATATGTTTGCATTTGTAGAAAGATTTTTCATATTCAGAGTGGTAACCTGACCACTGAAACTAGCTCTGTAGTAACTCCTAAATCGAACCACCCTGGAACCTGCATCATCTTGTTTAACAATATGTGAAGTTAAACTAGTATTCCCTCATATAGCCACTAGATTATCTTGAACACAGAAATTGTTTATTCATGTCGACTGTTCTGCCATTATCTAAAAAATATGTCGACTGTTCTGCGACTATCAGACTTGATGTTCACTGTTGTCTGTTGTGATCTGGATAAGGGCTGTTTATTTTGTTTTTGCTTCATTGACATTTATCATGCTTTATGTCGTGCAGTATTTTGAGCAGTACTGAGATCCACTCTTTTTTTTTTTCTGATGCAGTTCCTTAAAGAGCAGAAGGAGAACAGTGTAATGGCTGGTGTCGTAAAGGAGATAGAGAGTATGCTAGCTCGGGGAAATCTGGATTTGCCAATTACACTCTGTTTTGCAGTAACTAGAGGAGATGATTTTTTGTTGCATCAACTTCTTAAGCGTGGTATGGATCCAAATGAGTCAGATAATGACGGGCATACCGCACTGGTCAGTTTAGTCAACTATACGTATCTGTGTTGTTTATTTTTCTATGGACTTATGCTGACCAAGAAAGTTACCACTTTCAAATGTTCATGATTAACAGCATATAGCTGCTTCCAAAGGAAACGAGCAATGCGTCAGGCTTCTATTAGAATATGGAGCTGATCCAAATGCCAGAGGTATGCCGAAAACTGGAAAATTTTGACAGCATATAGTGTACAATTTAACTGTAAGAGTTAAATGGTATGAACAGCTGGATGTTATATCCAAACCCTGCAATATGTCATGGCCTCACGTCACCTGTAAATCTTACGAGGCTAAACTTGCTTGCAAAATTCCTGTTGAATTTTCTACCAATCTAACATCTAGAACTTACTGATTTACTTAATAGAATTTGCTCCATGAGTTTTTGCGAAGACGCAAAAGTTTTGTGCGTCGATGTAATTAACTCCATGAGTGATGAGTCTTATATACAGATGTTCAATACACCATCTGACATGCCACGATTTTCTTTTCCATTTTCCAGACTCAGAAGGAAAAGTTCCACTGTGGGAAGCGCTGTGTGAGAAGCACGCCGCCGTCGTGCAACTATTAGTCGAAGGCGGCGCGGATCTGTCGTCGGGTGACACGGGCTTATACGCTTGCATCGCCGTGGAGGAGAGCGACACCGAGCTGCTCAACGACATCATTCACTACGGAGGCGACGTGAACAGGGCTCGCCGGGACGGGACCACCGCCCTGCACCGCGCCGTCTGCGACGGCAACGTCCAGATGGCCGAGCTCTTGCTGGAACACGGAGCCGACATCGACAAGCAGGACGGCAACGGCTGGACCCCGAGAGCCCTCGCCGAGCAGCAGGGCCACGACGACATCCAGCTCCTGTTCCGGTCGCGCAAGGCGGCGACGGCGAGTGGCCACCATCACGTCCCAAGCTCCACCACCACCAGGGTGGCGCCGGCGGCGGCGGCGGCATCACTGATCGGGAGGTTCAACAGCGAGCCCATGATGAAGAACATGATCCACGAAGACGCCGACCTGCCCAGCCGGGTTCTCCCCGAGAAGCTCCGGAGGAAGCGGGTCACCTTCCAGAACTCCCTCTTCGGGGTCATCTCGTCGTCGCAGGCGCAGCGGGAGACCGACCACCCGCTCTCGAGGGGTGGCCTCGCGGCGACGGGCTCCCCGAACCCGAGCAGCGGCAGCCGCAACGCCGTCATCAGGGTGACGATCAGCTGCCCCGAGAAAGGGAACACCGCCGGGAAGCTCGTGCTCCTACCTCAGACGCTGGACATGCTCCTCGAGCTCGGCGCCAAGAAGTTCGACTTCGCGCCAACCAAGGTTCTCACCGTGGAGGGCGCCGAGGTTGACGAGGTGGAGCTCATCAGAGACGGCGATCATCTTGTGCTCGTCAGTGATGAATGGGATGCAGAGAAGATGAAATGCAAGAGCTAG</dnaseqindica> 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| External Link(s) |
