Difference between revisions of "BGIOSGA001489"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA001489|
Description = cDNA clone:001-133-D03, full insert sequence|
Definition = Oryza sativa Indica Group BGIOSGA001489, complete gene.|
t...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA001489| | GeneName = BGIOSGA001489| | ||
Revision as of 18:11, 20 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA001489 |
|---|---|
| Description |
cDNA clone:001-133-D03, full insert sequence |
| Definition |
Oryza sativa Indica Group BGIOSGA001489, complete gene. |
| LocusTag |
' |
| Ensembl Transcript ID |
BGIOSGA001489-TA |
| Ensembl Protein ID |
BGIOSGA001489-PA |
| Length |
6408 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:21805862..21812269 |
| Sequence Coding Region |
21812090..21812269,21810388..21810483,21810152..21810264,21809758..21809824,21809569..21809661 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome01:21805862..21812269 source=RiceIndica01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome01:21805862..21812269 source=RiceIndica01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGATGGGACGGCGCGGCAGCAGCTGGTGCCGGTGGTGGGTGGCGCTGCTGGTCCTCGCCGTGGCGGCCGATGCCGTGGGCTGCACCAGCGTCAGCTACGACGACCGCAGCCTCGTCATCGACGGCCAGCGCCGGATCATCCTCTCTGGTTCCATCCATTATCCCCGAAGCACTCCCGAGATGTGGCCGGATCTGATCAAGAAGGCGAAGGAAGGTGGTCTCGATGCCATCGAGACTTACATCTTTTGGAACGGCCATGAGCCACACCGCCGCCAGTACAATTTTGAGGGTAACTACGATGTCGTCAGGTTCTTCAAGGAGATCCAGAATGCCGGCATGTACGCCATTCTTCGCATTGGCCCGTACATCTGTGGCGAATGGAACTATGGAGGACTTCCAGCTTGGCTACGCGACATCCCTGGAATGCAGTTTAGGCTGCATAATGAGCCTTTTGAGAATGAGATGGAGACATTCACCACTCTTATAGTTAACAAGATGAAGGATTCAAAAATGTTTGCTGAACAAGGAGGACCGATCATCCTTGCTCAGATTGAGAATGAGTATGGAAACATCATGGGGAAATTAAACAACAACCAGTCTGCATCTGAATACATCCACTGGTGTGCTGACATGGCGAACAAGCAGAACGTCGGTGTCCCATGGATCATGTGTCAACAAGACGACGATGTGCCGCACAATGTGGTCAATACCTGTAATGGATTCTATTGCCATGACTGGTTTCCAAATAGGACAGGCATCCCTAAGATTTGGACAGAGAACTGGACTGGCTGGTTCAAAGCTTGGGACAAGCCGGATTTCCATAGGTCAGCTGAAGACATTGCTTTTGCGGTTGCGATGTTCTTCCAAAAGCGTGGATCTCTGCAAAATTACTATATGTACCATGGTGGAACCAACTTTGGTCGTACCTCCGGAGGTCCGTACATCACAACAAGCTATGATTATGACGCGCCTTTGGATGAGTATGGTAATCTCAGGCAACCCAAATATGGTCACTTGAAGGAACTCCACTCCGTGCTCAAGTCCATGGAGAAAACTCTTGTCCATGGAGAGTATTTTGACACCAACTATGGCGATAACATCACAGTTACCAAGTACACTCTGGACTCCTCATCTGCTTGCTTCATCAACAACAGATTTGATGATAAAGATGTCAATGTGACCCTCGATGGAGCCACTCACCTCCTGCCTGCATGGTCAGTCAGCATCTTGCCTGACTGCAAGACTGTTGCCTTCAATAGCGCCAAGATTAAGACCCAGACGTCTGTCATGGTGAAGAAACCCAACACGGCGGAGCAGGAGCAGGAGAGCCTAAAATGGTCTTGGATGCCTGAAAACTTGAGTCCTTTCATGACCGATGAGAAGGGCAACTTTAGGAAGAATGAGCTCTTGGAGCAGATCGTCACGTCAACCGATCAAAGTGATTACCTGTGGTACAGAACAAGTCTTAATCACAAAGGAGAAGGGAGCTACAAATTGTACGTGAACACGACTGGCCATGAACTTTATGCCTTTGTGAACGGGAAGCTTATTGGGAAAAACCATTCTGCCGATGGAGATTTTGTCTTCCAACTAGAGTCGCCGGTGAAGCTCCATGATGGCAAGAACTACATCTCTCTTCTGAGTGCAACCGTTGGCCTCAAGAACTATGGCCCTTCGTTCGAAAAGATGCCCACGGGCATTGTTGGAGGCCCTGTTAAGCTGATAGACAGCAATGGCACCGCAATTGATCTCTCCAACAGCTCCTGGTCTTATAAGGCTGGCTTGGCTAGTGAGTACAGGCAGATCCATCTTGACAAGCCAGGCTACAAATGGAATGGCAACAATGGCACCATCCCCATCAACAGGCCTTTTACTTGGTACAAGGCTACATTTGAAGCTCCGTCCGGCGAGGACGCGGTGGTGGTGGACCTGCTGGGCTTGAACAAGGGCGTGGCGTGGGTGAACGGCAACAACCTCGGCCGCTACTGGCCGTCGTACACGGCGGCGGAGATGGCCGGCTGCCACCGCTGCGACTACCGCGGCGCGTTCCAGGCGGAGGGCGACGGCACCAGGTGCCTCACGGGCTGCGGCGAGCCGTCGCAGCGCTACTACCACGTGCCGCGCTCCTTCCTCGCCGCCGGCGAGCCCAACACGCTGCTCCTCTTCGAGGAGGCCGGCGGCGACCCCTCGGGCGTCGCCCTCCGCACCGTGGTGCCCGGCCCCGTGTGCACCTCCGGCGAGGCCGGGGACGCCGTCACGCTGTCGTGCGGCGGCGGCCACGCCGTGTCGAGCGTCGACGTGCCAGCTTCGGCGTGGGGCGCGGGCGGTGCGGCGCCTACGAGGGCGGGTGCGAGTCCAAGGCGGCGTACGAGGCGTTCACGGCGGCGTGCGTCGGGAAGGAGTCGTGCACGGTGGAGATCACCGGCGCGTTCGCCGGCGCCGGGTGCCTGTCCGGCGTGCTCACCGTCCAGGCCACTTGCTGATTGTTTATGGAGTGGCCATGTCTTTGATTAA</cdnaseq> |
| Protein Sequence |
<aaseq>MMGRRGSSWCRWWVALLVLAVAADAVGCTSVSYDDRSLVIDGQRRIILSGSIHYPRSTPEMWPDLIKKAKEGGLDAIETYIFWNGHEPHRRQYNFEGNYDVVRFFKEIQNAGMYAILRIGPYICGEWNYGGLPAWLRDIPGMQFRLHNEPFENEMETFTTLIVNKMKDSKMFAEQGGPIILAQIENEYGNIMGKLNNNQSASEYIHWCADMANKQNVGVPWIMCQQDDDVPHNVVNTCNGFYCHDWFPNRTGIPKIWTENWTGWFKAWDKPDFHRSAEDIAFAVAMFFQKRGSLQNYYMYHGGTNFGRTSGGPYITTSYDYDAPLDEYGNLRQPKYGHLKELHSVLKSMEKTLVHGEYFDTNYGDNITVTKYTLDSSSACFINNRFDDKDVNVTLDGATHLLPAWSVSILPDCKTVAFNSAKIKTQTSVMVKKPNTAEQEQESLKWSWMPENLSPFMTDEKGNFRKNELLEQIVTSTDQSDYLWYRTSLNHKGEGSYKLYVNTTGHELYAFVNGKLIGKNHSADGDFVFQLESPVKLHDGKNYISLLSATVGLKNYGPSFEKMPTGIVGGPVKLIDSNGTAIDLSNSSWSYKAGLASEYRQIHLDKPGYKWNGNNGTIPINRPFTWYKATFEAPSGEDAVVVDLLGLNKGVAWVNGNNLGRYWPSYTAAEMAGCHRCDYRGAFQAEGDGTRCLTGCGEPSQRYYHVPRSFLAAGEPNTLLLFEEAGGDPSGVALRTVVPGPVCTSGEAGDAVTLSCGGGHAVSSVDVPASAWGAGGAAPTRAGASPRRRTRRSRRRASGRSRARWRSPARSPAPGACPACSPSRPLADCLWSGHVFD</aaseq> |
| Gene Sequence |
<dnaseqindica>1..180#1787..1882#2006..2118#2446..2512#2609..2701#2829..2981#3087..3175#3316..3421#3506..3593#3713..3831#3930..4091#4194..4390#4523..4611#4758..4867#4987..5100#5197..5304#5779..6408#ATGATGGGACGGCGCGGCAGCAGCTGGTGCCGGTGGTGGGTGGCGCTGCTGGTCCTCGCCGTGGCGGCCGATGCCGTGGGCTGCACCAGCGTCAGCTACGACGACCGCAGCCTCGTCATCGACGGCCAGCGCCGGATCATCCTCTCTGGTTCCATCCATTATCCCCGAAGCACTCCCGAGGTAACCGACTTGTTATACTAGCCGTCAACCCGTGCAACGCACGAGATAATTTTAAATATTATTTTTTAGCCCTATAAAATTTTACTCTGATAGTATTTCAGTCAAACAAAATCTTATAGGAATGGTTTAAATTGATGGCAAATTAATGCCAACTGCAATATGGTGATTTTTAATTTGTTTTCTGAGTGAATTATATTTTAATCATAGAATTCGTTGTATATTTTTAAAATTGTAAGATCCATGTATTATGAATGGTGTACAATATTGATATTGATATTGTTATCACCGTTGAGAATTATATTGAAATTGTAACTATGCGTAGTAATGTGTTAAGTGGAAAACTAATTAATTAAATAAATTTTGGCATTAGATCCAATCTGTACATGTAAAAAGAAATAAAAAAAGTAGCCACGGAATTAATCATGTGTTGGTAGCAACATAATCATTGTCCAAAATTCTGTCCGTGTAGTCAACATAATCATAGACTAAACTCTGTCAGCAAAGTAATTAGCACGTTACTATGTACTCTTCCAGGTGCTCATTTTTCAACCGTGTCATATATATAGTTTACCCAGGTTAAAATTGTTTGAGATGAGAAACCAATCTAGATTGAGAAACAATAATACCCGATCGACTTGGAGATATCTGAGCGCGTCCTAAAGTTCATCTCTATTTCCATTTGTGTTGATGCCTCCGCTTGAAATCCAGATCATCGGCAATATATCCAACTGAATTCCCTACAAAATTGTATGTAGAGATTATTGGATGGGATTTGTGAGGCCCATGGGACCATGATATTAACTATAAATTAATAATGTGTGGGTCTATTTGATCAACGGCAGATTCACACATCTCTATTTCCATTTGTGTTGATGCCTCCGCTTGAAATCCAGATCATCGGCAATAATATCCAACTGAATTCCCAACAAAATTGTATGTAGAGATTATTGGATGGGATTTGTGAGGCCCATGGGACCATGATATTAACTATAAATTAATAATGTGTGGGTCTATTTGATCGACGGCAGATTCACCAGGTTAACGCTGTATAGGTATAGATATTCCTAGTGTATACTATTTTTGTTTTTCAATACATGATGTCGTTAATTTTTTAATATGTTTGAACATTTGTAATAATTTATGGAGATACATAAGATATAAATCATGCTTAAAATACTTTGAGTGATAAAACAACTCACAAAAAATAAATTATAATTATGTTTTTTTAATAAGAAGAATGGTTAAATGTGTGAAAAAATCAACAACATCATGTATTTAAAAAATAGAGGTAGTTGATAATATTAATCTGCAAATTAAATGCATATACAACTTTGAGTGTTTTGTACTAGTAGGATACAGAGTTGCTTGCTTGAGTGTTTCTTTTCTTTTTGTGCCATAGATCGTGATGAGCTAAGCAGTGCGAGGAGTTTTATGTTCTATACTTTTATATACTTATGCAGCATATTATGTTGTGACTTATATACGTTCGATCTTTATTTTCTTAATTTGTCTTAAGAAATTAATGAACATAAGCAATATATGTACGTGCGCAAAAGATTAATTTGACTTTTTTTCTATCTAATCTAATCTTATTGTTGCTATGCAGATGTGGCCGGATCTGATCAAGAAGGCGAAGGAAGGTGGTCTCGATGCCATCGAGACTTACATCTTTTGGAACGGCCATGAGCCACACCGCCGCCAGGTTCAATATTACTACTTTTGCTTTAGCACATAAACACTACTACGTACTGCAGCTATTACATACAATAACAACCATGGATAAATACTAGTAATACTATAACAATGTTTTTGCTTTGATCGGCAGTACAATTTTGAGGGTAACTACGATGTCGTCAGGTTCTTCAAGGAGATCCAGAATGCCGGCATGTACGCCATTCTTCGCATTGGCCCGTACATCTGTGGCGAATGGAACTATGGGTATGTATCATGTATATAAATGCTAAAGCATTTGTGTGTCAAAGTGATAAATAGAATAGAATATTATATTGATCTGCAAATTAATCGAATATTATATCTATAATGTTCATATAGAATTAGAGAAAAAAACGAAATAGAATAGACTATTATATCGATCTGCAAATTAATCAAATATTATATCTATAGTGTTCATATAGAATAAGAGGAAACAAGAGAGCACACTAAACTACTCTAGTTTCTTTCTATAACATTATTATGTGTCCATGCATGCATGTTGAAGTGCTCACTGTGTTTTGTTGTTTTCTAAAACAAATGCCAAATGTGCAGAGGACTTCCAGCTTGGCTACGCGACATCCCTGGAATGCAGTTTAGGCTGCATAATGAGCCTTTTGAGGTTAAATAATAATAATAATAAAATTCTCATCTATTTTTGTGTACTTTTACATATACTAGCATATAATTAATGCAAGTGTTTTTTTCCATGATATAGAATGAGATGGAGACATTCACCACTCTTATAGTTAACAAGATGAAGGATTCAAAAATGTTTGCTGAACAAGGAGGACCGATCATCCTTGCTCAGGTATTGTAATGATCATTCTTCAATATGATTGAACAATGGGAAATTAGCATGTTAATAATTTGTACTATTGTCATTCCACAATATATATTGTCAATTAATATCAATGCATTAATGGATCAATGCACAGATTGAGAATGAGTATGGAAACATCATGGGGAAATTAAACAACAACCAGTCTGCATCTGAATACATCCACTGGTGTGCTGACATGGCGAACAAGCAGAACGTCGGTGTCCCATGGATCATGTGTCAACAAGACGACGATGTGCCGCACAATGTGGTGAGCATGGGTTTTAATCCCACAAGAATATAGAATATTATATGAATTTATCTGTTTATCACTCATCTAATAACATGAGTTTGTCATTGTTTTGGACCGCTCTAGGTCAATACCTGTAATGGATTCTATTGCCATGACTGGTTTCCAAATAGGACAGGCATCCCTAAGATTTGGACAGAGAACTGGACTGGCTGGTATTTTTTTTTCTTCCATTAGTATTTCTCTCATTGTTTACAAAATTAACTTTTAGTATATATATCTCTTTGTTTGCAAAATTATTTTTTGATGAACATGGAGGAGATTTATCTTAATTTGTTGATGTACTTAACGTTAGGTTCAAAGCTTGGGACAAGCCGGATTTCCATAGGTCAGCTGAAGACATTGCTTTTGCGGTTGCGATGTTCTTCCAAAAGCGTGGATCTCTGCAAAATTACTATATGGTATGCTGGCTAGCTTGTATCTCTTTCACAATGACTGAATTTTCGTTGATTTATGCTGAGTTTTTTTTTTCCATTTTTTGTTAGTACCATGGTGGAACCAACTTTGGTCGTACCTCCGGAGGTCCGTACATCACAACAAGCTATGATTATGACGCGCCTTTGGATGAGTATGGTAAGCTTTGATTAATATATTTTACCGTACTGTTAATTATATGGTGAATTTGAATAAGAAAGCAATTTTTTGTCTTATTTTAATTATAATCTTGTTGGTCTACTTTTGATTTATTACAGGTAATCTCAGGCAACCCAAATATGGTCACTTGAAGGAACTCCACTCCGTGCTCAAGTCCATGGAGAAAACTCTTGTCCATGGAGAGTATTTTGACACCAACTATGGCGATAACATCACAGTAATATTCAGATCACGCCCTTCTTTTAATCAAAATTATCACGTCTAATGCAAACATATCTAATGCATGCATATTGGTACTATCTCTGATCAATGTAGGTTACCAAGTACACTCTGGACTCCTCATCTGCTTGCTTCATCAACAACAGATTTGATGATAAAGATGTCAATGTGACCCTCGATGGAGCCACTCACCTCCTGCCTGCATGGTCAGTCAGCATCTTGCCTGACTGCAAGACTGTTGCCTTCAATAGCGCCAAGGTATTTTTCCTTTCTCAATAATCAATAATGAAATTAAAATGAGACCAAGTGTAAGGTCTATAATTCATCTCTTAATTTTGTTTTCCTCTTGGTATGACCTAGATTAAGACCCAGACGTCTGTCATGGTGAAGAAACCCAACACGGCGGAGCAGGAGCAGGAGAGCCTAAAATGGTCTTGGATGCCTGAAAACTTGAGTCCTTTCATGACCGATGAGAAGGGCAACTTTAGGAAGAATGAGCTCTTGGAGCAGATCGTCACGTCAACCGATCAAAGTGATTACCTGTGGTACAGAACAAGGTATTTTTTTAAAAAAAAAATCTCTTTATACTAAAGAAAAGAGATCATGATGATGTAAATTTGAAATGATTCCGACAAAAAAATATATATATGTTACAAATTTAGAACGTCACCAACAAAAAAAAATTGTAGTCTTAATCACAAAGGAGAAGGGAGCTACAAATTGTACGTGAACACGACTGGCCATGAACTTTATGCCTTTGTGAACGGGAAGCTTATTGGTGAGTATCAAAGTTTTTTTTTTCCCATATTTTCGTTGCACCATTCTTTTAATTCTCTGTGGGTCGAAATTAAAGAATGTTTGTGAACCTGCGGGTCAAAATTAAAGAATGTTCATTGACAAACATGTGTGTTCATAATTTGTCAGGGAAAAACCATTCTGCCGATGGAGATTTTGTCTTCCAACTAGAGTCGCCGGTGAAGCTCCATGATGGCAAGAACTACATCTCTCTTCTGAGTGCAACCGTTGGCCTCAAGGTTCCTAATTTTCTTTCTTGAATGCTCACTTCCATCGTATCAGCAACGAACTCATCTTCTTTATTTGCAATTAATCATGTATACCAGTGATAAATTGTTTGATCATTCTTGGTAAACAGAACTATGGCCCTTCGTTCGAAAAGATGCCCACGGGCATTGTTGGAGGCCCTGTTAAGCTGATAGACAGCAATGGCACCGCAATTGATCTCTCCAACAGCTCCTGGTCTTATAAGGTTACACATTATTTTTCATCAATGCTTAGTTGTTTGTTAACTTTGCTGGTATTGATCATATAGTGTTTCTTGCTTTGATGTTTTTTTGTGTTGTAGGCTGGCTTGGCTAGTGAGTACAGGCAGATCCATCTTGACAAGCCAGGCTACAAATGGAATGGCAACAATGGCACCATCCCCATCAACAGGCCTTTTACTTGGTACAAGGTACAGTATATGTCCATTGTTTACTCACTCTCTCCGGTTTTATAATTCTTAACATTCTGAACAATGACATAATTTTCAAAATATATCTCTGTCTATATTTCTCTATTACAATATATTAATATAAATATATATATATTACTTTTGTTATAGTACTTTGTAAGTCAAATTTATATATGTTGTTTTGGTGCCTTTAAACTAGATATTTTTAAAGTCATTATTAGTTAATTTATAAAAGTTTAACCTAAAACTTATCAATTATGAAACTGGAGTAATTTAATTACCTGTATGATTTCATTTCATCGTTTCATTCTTTCACCTGCAAAAATAAAAGGATTTTTAATACTTTTTTTGTTTTCTTATGAAGACTACAATTTACTTAATTTACCTTCCCTATGAAATTTCATCATGTCATTAATTCTTTCACCGCCAAAACAATCTTAATACTTTGGTTACTTTTTTTTTTTTGTTATGAAGGCTACATTTGAAGCTCCGTCCGGCGAGGACGCGGTGGTGGTGGACCTGCTGGGCTTGAACAAGGGCGTGGCGTGGGTGAACGGCAACAACCTCGGCCGCTACTGGCCGTCGTACACGGCGGCGGAGATGGCCGGCTGCCACCGCTGCGACTACCGCGGCGCGTTCCAGGCGGAGGGCGACGGCACCAGGTGCCTCACGGGCTGCGGCGAGCCGTCGCAGCGCTACTACCACGTGCCGCGCTCCTTCCTCGCCGCCGGCGAGCCCAACACGCTGCTCCTCTTCGAGGAGGCCGGCGGCGACCCCTCGGGCGTCGCCCTCCGCACCGTGGTGCCCGGCCCCGTGTGCACCTCCGGCGAGGCCGGGGACGCCGTCACGCTGTCGTGCGGCGGCGGCCACGCCGTGTCGAGCGTCGACGTGCCAGCTTCGGCGTGGGGCGCGGGCGGTGCGGCGCCTACGAGGGCGGGTGCGAGTCCAAGGCGGCGTACGAGGCGTTCACGGCGGCGTGCGTCGGGAAGGAGTCGTGCACGGTGGAGATCACCGGCGCGTTCGCCGGCGCCGGGTGCCTGTCCGGCGTGCTCACCGTCCAGGCCACTTGCTGATTGTTTATGGAGTGGCCATGTCTTTGATTAA</dnaseqindica> 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| External Link(s) |
