Difference between revisions of "BGIOSGA001640"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA001640| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001640, complete gene.| tag = B1329D0...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA001640|
 
GeneName = BGIOSGA001640|

Revision as of 18:12, 20 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA001640

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001640, complete gene.

LocusTag

B1329D01.2

Ensembl Transcript ID

BGIOSGA001640-TA

Ensembl Protein ID

BGIOSGA001640-PA

Length

1746

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16610429..16612174

Sequence Coding Region

16611991..16612174,16611717..16611832,16611276..16611448,16610732..16610825,16610429..16610527

Genome Context

<gbrowseImage1> name=IndicaChromosome01:16610429..16612174 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:16610429..16612174 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGGCGCCGCCGTCTCCAGCCTGCTTGCCACCCCAACACCGACCTCTCGACCTCGACCCGTCTCCACCACCACCGCCCCCTTCTCCGTCAACCTCTCCACCGCAGCTGCCCGCGCACCTCGCCTCCTCCTCCTCTCGCGCCGCCCTCGCCCTCGCCCTCGCCCCGCCGCCGCGGTTCTCGGGGTGTCTGATGATACAGGGGTCAAGATGGCTGGCTCCGACATTGTTGGCAAGAACGATTTGCTGATTGTTGGCCCTGGAGTGCTTGGTCGACTGGTAGCTGAGAAATGGCAGGAGGAACATCCAGGATGCAAAGTTTTTGGCCAGACCACAAGCACAGATCACCACAACGAATTGTCGAATATTGGCATCATTCCCTCCTTGAAGGGATCCACTTTTCCTCAGAAGGTTCCATATGTTATTTTCTGTGCTCCCCCATCTCGTTCGGATGATTACCCTGGGGATGTGAGAGTAGCTGCCTCAAATTGGACTGGTGAAGGCTCTTTTGTTTTTACATCAAGTACTGCTCTGTACGATTGTAGTGACAACGAATTGTGCAATGAGGATTGCCCATCTGTGCCAATTGGCAGAAGCCCTCGTACTGACGTCCTTCTAAAAGCAGAGAATGTTGTTCTTGAGGCAGGAGGCTGTGTCTCAGGCTAG</cdnaseq>

Protein Sequence

<aaseq>MGGAAVSSLLATPTPTSRPRPVSTTTAPFSVNLSTAAARAPRLLLLSRRPRPRPRPAAAVLGVSDDTGVKMAGSDIVGKNDLLIVGPGVLGRLVAEKWQEEHPGCKVFGQTTSTDHHNELSNIGIIPSLKGSTFPQKVPYVIFCAPPSRSDDYPGDVRVAASNWTGEGSFVFTSSTALYDCSDNELCNEDCPSVPIGRSPRTDVLLKAENVVLEAGGCVSG</aaseq>

Gene Sequence

<dnaseqindica>1..184#343..458#727..899#1350..1443#1648..1746#ATGGGCGGCGCCGCCGTCTCCAGCCTGCTTGCCACCCCAACACCGACCTCTCGACCTCGACCCGTCTCCACCACCACCGCCCCCTTCTCCGTCAACCTCTCCACCGCAGCTGCCCGCGCACCTCGCCTCCTCCTCCTCTCGCGCCGCCCTCGCCCTCGCCCTCGCCCCGCCGCCGCGGTTCTCGGTAACCACATCTCTCTCTTTCTCTCTCCACCTCGGATTATCTTGTTCTCCTATGTTTGCGGTACCATGTACCATTGTGAGGGTGAGGGTGCATGGGAACGAGATGGGCTTGCAATTGGATGACTCTTTGTTACTTGGGTTTTGGTGCTTCCAATCCAGGGGTGTCTGATGATACAGGGGTCAAGATGGCTGGCTCCGACATTGTTGGCAAGAACGATTTGCTGATTGTTGGCCCTGGAGTGCTTGGTCGACTGGTAGCTGAGAAATGGCAGGAGGTATTATTATCAGATTGCCCGCTTGTTATACTCTCTCAGTTATTTACCTTGTGTCCCCTATTGGTTTAAACTTCGAAAACCATATTCCTCTTTCATCGTGTGGAGCATAATATTTTTTTTTGGTTCAAAATGGCGTATCTACTTTTGTTGCTTCTGTAATACTAGGATTTTTAATATTTAATCTTCTGATTAACATAAAAAAATGATGCCGCACTGTTAATTCGTTTAATTGAGTACAATAATAATGTACACTGTCCATACTCTGTAGGAACATCCAGGATGCAAAGTTTTTGGCCAGACCACAAGCACAGATCACCACAACGAATTGTCGAATATTGGCATCATTCCCTCCTTGAAGGGATCCACTTTTCCTCAGAAGGTTCCATATGTTATTTTCTGTGCTCCCCCATCTCGTTCGGATGATTACCCTGGGGATGTGAGGTAAATGAGTACGATTATAATGATGAATCCATGATTATATTATTGTTAACAGTATCATCCTACCTTCTGGTATCATGTGAGTTCCTAATGGCTAAGGTCCATTGGTTACTCCTAAACATTTATTTTCTTTTTAACACATAAACTATCCAAATTTGTGTTTATAGTGTATAGTGGTATTTTGCTAATGAATATGCCTCTGGCAACATTTGCTTGTGGGTGTAAGTTTCTTTTTTGAGAGGAGGGGTTTGAATTATTTTCCTTGAAGGCCAGAACCATGATACGCAACTCTCTTGCGTATTCAAGAAAAAAAGAACCATTCCAGAACAAAATATTATTGAATCATTGTTGTAATAGTTCCATTCCAATGATATGAACCATTCATCTATCTTGCACTAATCGAAACGCATACATGGACATGTGATGTATTCTTATTTCAGAAAATGCGTGCAGAGTAGCTGCCTCAAATTGGACTGGTGAAGGCTCTTTTGTTTTTACATCAAGTACTGCTCTGTACGATTGTAGTGACAACGAATTGTGCAATGAGGTATCCCCACAAGCCTGCAGATTGTAGCTGTGAAGTCTTCCATACTTTTCTTTTTGGCTCTTTTCATTTATAGAAGTTCTAGTGACATTAAAAAAAAAACAATGTATCCACAAGCCATATTATGCAACTCTAAATATTTTTTCTTGACGGTTGAAAAACTTTATTGTTTTTGTTTTAACCATAATTATTCCTCCCATTATGTAGGATTGCCCATCTGTGCCAATTGGCAGAAGCCCTCGTACTGACGTCCTTCTAAAAGCAGAGAATGTTGTTCTTGAGGCAGGAGGCTGTGTCTCAGGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001640