Difference between revisions of "BGIOSGA001681"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA001681| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA001681, complete gene.| tag = MRP8| ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA001681|
 
GeneName = BGIOSGA001681|

Revision as of 18:12, 20 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA001681

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001681, complete gene.

LocusTag

MRP8

Ensembl Transcript ID

BGIOSGA001681-TA

Ensembl Protein ID

BGIOSGA001681-PA

Length

4193

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:15915677..15919869

Sequence Coding Region

15918859..15919869,15918500..15918664,15918085..15918379,15917376..15917590,15916884..15917189
,15916747..15916810,15915925..15916164,15915677..15915777

Genome Context

<gbrowseImage1> name=IndicaChromosome01:15915677..15919869 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:15915677..15919869 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGTACGTGCCGCAGACGGCGTGGATCCAGAACGGGACGATCGAGGAGAACATCCTGTTCGGGCGGGGGATGCAGCGGGAGCGGTACAGGGAGGCGATCCGGGTGTGCTCCCTGGACAAGGACCTGGAGATGATGGAGTTCGGGGACCAGACGGAGATCGGGGAGCGCGGCATCAACCTGAGCGGCGGGCAGAAGCAGCGCATCCAGCTCGCCCGCGCCGTCTACCAGGACGCCGACGTCTACCTCCTCGACGACGTCTTCAGCGCCGTCGACGCCCACACCGGCTACGATATCTTCCGCGACTGCGTCCGCGGCGCCCTCAGGGACAAGACCGTCCTCCTAGTCACCCACCAGCTCGACTTCCTCCGCAACGCCCACGCCATCTACGTCATGCGCGACGGCGCCGTCGCCCAGTCCGGCCGCTACCACGACCTCCTCCGCACCGGCACCGACTTCGCCGCGCTCGTCGCGGCCCACGAGTCCTCCATGGAGCTCGTCGAGAGCGCCGCGCCCGGTCCTTCGCCGTCGCCCGCGGGCAACCTGCCGCTCTCCCGCCAGCCGTCGTCCGCGCCCAAGGAGAGGGAGAGCGCGTCGTCGAACGGCGACATCAAGACGGCGAAGGCGTCGTCGCGGCTGATCAAGGCGGAGGAGCGGGCGAGCGGGCACGTGAGCTTCACGGTGTACAGGCAGTACATGACGGAGGCGTGGGGGTGGTGGGGGCTGATGCTGGTGCTCGCCGTGTCCGTGGCGTGGCAGGGCTCCACCATGGCCGCCGACTACTGGCTCGCCTACCAGACCTCCGGCGACGCGTTCCGGCCCGCCCTCTTCATCAAGGTGTACGCCATCATCGCCGCCGTGTCCGTGGTGATCGTCACGGTGAGGTCCCTCCTCGTCGCCACCATCGGCCTCGACACCGCCAACATCTTCTTCAGGCAGGTCCTCAGCACCATCCTCCACGCCCCCATGTCCTTCTTCGACACCACCCCCTCCGGCAGGATCCTCACCAGGGCGTCATCGGACCAGACGAACGTGGATCTGTTGTTGCCGTTCTTCGTGTGGATGAGCGTTTCCATGTACATCACGGTGATAGGCGTGGTGATCATGACGTGTCAGGTGGCCTGGCCTTCGGTCGTCCTCGTCGTACCCTTGCTCATGCTCAACCTCTGGTTCCGGAAATACTACATCTCGACGTCGAGGGAGCTGACCAGGCTGGAGTCGATCACCAAGGCTCCCGTGATCCACCACTTCTCGGAGACGGTGCAGGGCGTCATGGTGATCAGGTGCTTCCAGAAGCAGGACAACTTCTTCCACGAGAACCTCAGCCGCCTCAACGCCAGCCTCAAGATGGACTTCCACAACAATGCCGCCAACGAGTGGCTCGGCCTGCGGCTGGAGCTCATCGGAAGCCTTGTCCTCTGCGTCACCGCCTTGCTCATGGTCACGTTGCCGTCCAACATCGTCCTTCCAGAGTATGTCGGTTTGTCGCTCTCGTATGGCCTGTCACTTAACTCGGTGATGTTCTGGGCCATTTGGTTGAGTTGCAATATTGAAAACAAAATGGTCTCAGTTGAGAGGATAAAGCAGTTCACGAACATCCCATCTGAGGCAGAATGGAGGATCAAGGAGACTGCTCCCTCTGCAAACTGGCCACACAAAGGCGACATCGATATCATTGATCTCAAGTTTCGGTACAGGCACAACACTCCCCTAGTGCTGAAGGGCATCACGCTAAGCATACTCGGAGGGGAGAAGATTGGTGTGGTTGGGAGAACTGGCAGTGGGAAATCGACGCTGATCCAGGCATTGTTCAGAATAGTTGAGCCTTCTGAGGGGAAGATAATCATCGACGGCATCGACATCTGCACGCTAGGGCTCCATGATCTGAGGTCTCGGTTCGGCATTATCCCTCAGGAGCCTGTCCTCTTCGAAGGGACGATTCGGAGCAACATCGACCCGCTTCAGCTGTACTCTGATGATGAAATTTGGCAGGCCTTGGAACGTTGTCAGCTGAAAGATGCAGTGACCTCAAAACCCGAGAAGCTTGATGCATCAGTTGTCGACAACGGCGAGAACTGGAGTGTTGGGCAGAGGCAGTTGCTGTGCCTTGGCCGAGTGATGCTGAAGCACAGCAGGATACTGTTCATGGACGAGGCCACTGCTTCAGTGGATTCCCAAACCGATGCCGTGATTCAGAAGATCATCCGGGAAGAGTTCTCAGCCTGCACCATCATCAGCATCGCGCACAGGATACCGACGGTCATGGACTGCGACAGAGTCCTGGTCATCGATGCCGGCCTAGCGAAGGAATTTGACAGTCCTGCAAACCTGATCGAAAGGCCATCACTGTTTGGAGCATTGGTTCAAGAGTACGCAACCCGGTCATCCGATATATAA</cdnaseq>

Protein Sequence

<aaseq>MAYVPQTAWIQNGTIEENILFGRGMQRERYREAIRVCSLDKDLEMMEFGDQTEIGERGINLSGGQKQRIQLARAVYQDADVYLLDDVFSAVDAHTGYDIFRDCVRGALRDKTVLLVTHQLDFLRNAHAIYVMRDGAVAQSGRYHDLLRTGTDFAALVAAHESSMELVESAAPGPSPSPAGNLPLSRQPSSAPKERESASSNGDIKTAKASSRLIKAEERASGHVSFTVYRQYMTEAWGWWGLMLVLAVSVAWQGSTMAADYWLAYQTSGDAFRPALFIKVYAIIAAVSVVIVTVRSLLVATIGLDTANIFFRQVLSTILHAPMSFFDTTPSGRILTRASSDQTNVDLLLPFFVWMSVSMYITVIGVVIMTCQVAWPSVVLVVPLLMLNLWFRKYYISTSRELTRLESITKAPVIHHFSETVQGVMVIRCFQKQDNFFHENLSRLNASLKMDFHNNAANEWLGLRLELIGSLVLCVTALLMVTLPSNIVLPEYVGLSLSYGLSLNSVMFWAIWLSCNIENKMVSVERIKQFTNIPSEAEWRIKETAPSANWPHKGDIDIIDLKFRYRHNTPLVLKGITLSILGGEKIGVVGRTGSGKSTLIQALFRIVEPSEGKIIIDGIDICTLGLHDLRSRFGIIPQEPVLFEGTIRSNIDPLQLYSDDEIWQALERCQLKDAVTSKPEKLDASVVDNGENWSVGQRQLLCLGRVMLKHSRILFMDEATASVDSQTDAVIQKIIREEFSACTIISIAHRIPTVMDCDRVLVIDAGLAKEFDSPANLIERPSLFGALVQEYATRSSDI</aaseq>

Gene Sequence

<dnaseqindica>1..1011#1206..1370#1491..1785#2280..2494#2681..2986#3060..3123#3706..3945#4093..4193#ATGGCGTACGTGCCGCAGACGGCGTGGATCCAGAACGGGACGATCGAGGAGAACATCCTGTTCGGGCGGGGGATGCAGCGGGAGCGGTACAGGGAGGCGATCCGGGTGTGCTCCCTGGACAAGGACCTGGAGATGATGGAGTTCGGGGACCAGACGGAGATCGGGGAGCGCGGCATCAACCTGAGCGGCGGGCAGAAGCAGCGCATCCAGCTCGCCCGCGCCGTCTACCAGGACGCCGACGTCTACCTCCTCGACGACGTCTTCAGCGCCGTCGACGCCCACACCGGCTACGATATCTTCCGCGACTGCGTCCGCGGCGCCCTCAGGGACAAGACCGTCCTCCTAGTCACCCACCAGCTCGACTTCCTCCGCAACGCCCACGCCATCTACGTCATGCGCGACGGCGCCGTCGCCCAGTCCGGCCGCTACCACGACCTCCTCCGCACCGGCACCGACTTCGCCGCGCTCGTCGCGGCCCACGAGTCCTCCATGGAGCTCGTCGAGAGCGCCGCGCCCGGTCCTTCGCCGTCGCCCGCGGGCAACCTGCCGCTCTCCCGCCAGCCGTCGTCCGCGCCCAAGGAGAGGGAGAGCGCGTCGTCGAACGGCGACATCAAGACGGCGAAGGCGTCGTCGCGGCTGATCAAGGCGGAGGAGCGGGCGAGCGGGCACGTGAGCTTCACGGTGTACAGGCAGTACATGACGGAGGCGTGGGGGTGGTGGGGGCTGATGCTGGTGCTCGCCGTGTCCGTGGCGTGGCAGGGCTCCACCATGGCCGCCGACTACTGGCTCGCCTACCAGACCTCCGGCGACGCGTTCCGGCCCGCCCTCTTCATCAAGGTGTACGCCATCATCGCCGCCGTGTCCGTGGTGATCGTCACGGTGAGGTCCCTCCTCGTCGCCACCATCGGCCTCGACACCGCCAACATCTTCTTCAGGCAGGTCCTCAGCACCATCCTCCACGCCCCCATGTCCTTCTTCGACACCACCCCCTCCGGCAGGATCCTCACCAGGGTAACCCACAACATTCCCAACTAATCACAGGAGTGATCTTACCATATTTTTTAGTGTAAAATTTGATACATGCATCAAAATTTACATTAAAAATATTGCTACCTCCCGATACTGACCGTAGAATTACTCTAGATAGGTGTATATTACGATTTTATATATGAGTGAGGTAACATTTCTATCTTTGTGATGTGCAGGCGTCATCGGACCAGACGAACGTGGATCTGTTGTTGCCGTTCTTCGTGTGGATGAGCGTTTCCATGTACATCACGGTGATAGGCGTGGTGATCATGACGTGTCAGGTGGCCTGGCCTTCGGTCGTCCTCGTCGTACCCTTGCTCATGCTCAACCTCTGGTTCCGGGTAAAGTTGCTAGACCTGGATTTCTTTTTTCTACGCTTAGGCGTAACCCGTTTATTACACGTGATCTAAATAGTTCTAGAAAGAAATTTGACATTTTTTTTTTGCTGATTTGATTTGCAGAAATACTACATCTCGACGTCGAGGGAGCTGACCAGGCTGGAGTCGATCACCAAGGCTCCCGTGATCCACCACTTCTCGGAGACGGTGCAGGGCGTCATGGTGATCAGGTGCTTCCAGAAGCAGGACAACTTCTTCCACGAGAACCTCAGCCGCCTCAACGCCAGCCTCAAGATGGACTTCCACAACAATGCCGCCAACGAGTGGCTCGGCCTGCGGCTGGAGCTCATCGGAAGCCTTGTCCTCTGCGTCACCGCCTTGCTCATGGTCACGTTGCCGTCCAACATCGTCCTTCCAGGTACAGCAAAATGGATCACAGTATTTTTTTTTATTTTGGAATTTTACAGTTTTTGAGAAAATATCTTAAGATATCTAAGTTTTATATTAAAATTTTTGGTACGTCAAGGCACTTAGTATTTAGAGGTATCAAATTTTACAATAGAAAATATGATACCTTACTTTCTTAAGGGTCGTAAAATCACCCATTTTCTTTATCATGTACTCCCTCCGTTTTTTAATAGATGACGCCGTTGATTTTTTCTCACATGTTTGACTATTCGTCTTATTCAAAAAATTTAAGTAATTATAATTTATTTTGTTATGAGTTGTTTTATCACTCATAGTACTTTAAGTGTGATTTATATCTTATACATTTGTATAAAATTTTTGAATAAGACGAATGGTCAAATATGTGAGAAAAAGTCAACGGCGTCATCTATTAAAAAACGGAGGTAGTATGTAGCGGCTGTATTTTTCTATGCTGAAGAGCTGAACATGTTATCGCTGCTGCAGAGTATGTCGGTTTGTCGCTCTCGTATGGCCTGTCACTTAACTCGGTGATGTTCTGGGCCATTTGGTTGAGTTGCAATATTGAAAACAAAATGGTCTCAGTTGAGAGGATAAAGCAGTTCACGAACATCCCATCTGAGGCAGAATGGAGGATCAAGGAGACTGCTCCCTCTGCAAACTGGCCACACAAAGGCGACATCGATATCATTGATCTCAAGGTAACTCCTAACTCCGTAAGTTTTACTTGTTCGGTATAACACAGTCAAAAAAGATCTTTACCAATTTGATCAAGATTTAAAATCATCAGCACTGGAGAATATACATTTGGTTTTCTTCTTTCTAATGGTCCTGAAGATTAAAAATGTGCAGTAGCTAAACCTGAAGTACTCTGTCTGCCCTTGCAGTTTCGGTACAGGCACAACACTCCCCTAGTGCTGAAGGGCATCACGCTAAGCATACTCGGAGGGGAGAAGATTGGTGTGGTTGGGAGAACTGGCAGTGGGAAATCGACGCTGATCCAGGCATTGTTCAGAATAGTTGAGCCTTCTGAGGGGAAGATAATCATCGACGGCATCGACATCTGCACGCTAGGGCTCCATGATCTGAGGTCTCGGTTCGGCATTATCCCTCAGGAGCCTGTCCTCTTCGAAGGGACGATTCGGAGCAACATCGACCCGCTTCAGCTGTACTCTGATGATGAAATTTGGCAGGTATTTGACAAGCAGGTTTAAATTTGTGTCCCAGCACATATTCTGTTATTTAAACATTTTTTTTCCCTTTTAGGCCTTGGAACGTTGTCAGCTGAAAGATGCAGTGACCTCAAAACCCGAGAAGCTTGATGCATCAGGTACTTCATTTACAAATCACTGTTATTTGTATACATTTTTAGCTCAGGTGCTGAGCAATTATTCCATAGACTTTAGCTTACATGAACTAGTAGTGACCTTGTTACATAAGTTCTAGTACAACTCACTCTCGTGGCAATCTTTTCACAGAAAAAAAAATCCTTCTTTTGTTACATCGGTTACAGCTACGTACTAATATGAGTATTTTTTTCTTTGAGCAAAGGGCGATGCCCTCCATTTCCATTAAAGAAATGTAAAGATTCTTACAAGAAACAGAGTCTGAAAGATCAAAATGACATCATGCCTAAAGCCCAAGCTAAAGTTTTCCTAAAGAAAGAACTCCAATTCTGCCACACAGAGCCAAACAGAAGATCAAACTACCTAGTAAGATAAAAGCCCATAATCGACTATCTCCAGTAAACGCCATCAGCCATTGAGCAGTCTTCTCTGTCCAAGACGCCACCCAAATTGTGATTTAAAAACTTCATTTGCTATTTGCTTTAGCAGTTGTACTCCCCATTGCAACTTTCCTTGCCTTTCCTCCGAACGTACTAATATGAGTATGGCTTGCCCTTTTCATCTAGTTGTCGACAACGGCGAGAACTGGAGTGTTGGGCAGAGGCAGTTGCTGTGCCTTGGCCGAGTGATGCTGAAGCACAGCAGGATACTGTTCATGGACGAGGCCACTGCTTCAGTGGATTCCCAAACCGATGCCGTGATTCAGAAGATCATCCGGGAAGAGTTCTCAGCCTGCACCATCATCAGCATCGCGCACAGGATACCGACGGTCATGGACTGCGACAGAGTCCTGGTCATCGATGCCGGTAAGCTTCACTGAAACTTCGAAACAGGAAGCAATGTCTTCTATTTCCGAATAACGAAACTTTAGCTCATGATATCCTAGCTTTAATGTTATCTGACGCTCTTAGCAATCTGAAAAACTGAAGAATTTTTTTTCTTCTTATTACCAGGCCTAGCGAAGGAATTTGACAGTCCTGCAAACCTGATCGAAAGGCCATCACTGTTTGGAGCATTGGTTCAAGAGTACGCAACCCGGTCATCCGATATATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001681