Difference between revisions of "BGIOSGA002220"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA002220|
Description = NAC-type transcription factor|
Definition = Oryza sativa Indica Group BGIOSGA002220, complete gene.|
tag = P0710E05.3...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA002220| | GeneName = BGIOSGA002220| | ||
Revision as of 18:15, 20 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA002220 |
|---|---|
| Description |
NAC-type transcription factor |
| Definition |
Oryza sativa Indica Group BGIOSGA002220, complete gene. |
| LocusTag |
P0710E05.32-1 |
| Ensembl Transcript ID |
BGIOSGA002220-TA |
| Ensembl Protein ID |
BGIOSGA002220-PA |
| Length |
5734 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:5263803..5269536 |
| Sequence Coding Region |
5269456..5269536,5269148..5269339),complement(5268818..5268995,5267690..5268279),complement(5266662..5266916 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome01:5263803..5269536 source=RiceIndica01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome01:5263803..5269536 source=RiceIndica01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGTACACCTCTCCCACACTCCTTGCTCTCTCGTTTGCTCTTCTACTGCTCATCCTCCTCCTCTACTACTCGTCCTCTTTGCTCTATTCACAGCTAGCAACAAGAAGGAGGCTTACACATGCATGTGCACGGTCTCTGCCGGACGCATATGAATCAGGCATGAATAGGGGGCACATCAGCAGCTCGGAGCTCATCGACGCCAAGCTCGAGGAACGCCGGATCTCCACGGCCAAGCACTGCCCCAGCTGCGGCAACAAGCTCGACTGCAAACCGGATTGGGTGGGGCTACCGGCAGGAGTCAAGTTCGATCCGACGGACCAGGAGTTGATCGAGCACCTCGAGGCCAAAGTGAGGGAAGAAGGCTCAAGATCTCATCCTCTCATCGATGAGTTCATACCCACGATAGAAGGGGAGGACGGCATATGCTACACCCACCCTGAGAAACTTCCAGGTGTGACAAGGGACGGCCTGAGCAAGCACTTCTTCCACCGGCCGTCGAAGGCGTACACGACGGGGACGAGGAAGCGGCGGAAGATCCAGACGGAGTGCGACGTGCAGAAGGGGGAGACGAGGTGGCACAAGACCGGCAAGACCCGGCCGGTGATGGTGAGCGGCCGGCAGAAGGGGTGCAAGAAGATACTGGTCCTCTACACCAACTTCGGCAAGCACCGCAAGCCGGAGAAGACCAACTGGGTGATGCACCAGTACCACCTCGGCGACCTCGAGGAGGAGAAGGAAGGGGAGCTCGTCGTCTGCAAGATCTTCTACCAGACGCAGCCTCGGCAGTGCAGCTGGTCCTCCGACCGCGGCGGCGGCGCCGCCGCCACCGCATCCGCCGTGACGACGGCGGCGGTGCAACAGGATCAGCAGCGCAGGAGGGACAGCGGCAGCGGCAGCTGCTCGTCGACGAGGGACCACGAGGTGTCGGCGACGTCCTACTCGACGGCCGGGTACGCCGTCGCCGCCGCCGTCGAGATGCAGCATTTGAAGCATGCCGCCGACCATTTCAGCTTCGCGCCTTTCAGGAAGAGTTTCGAGGAGGTTGGTATAAGTGGTGATCAGGTACACTCCAATCAGCTTGGGAGGTCGGAGCAGCAGCATGCTGGCCAGGAACAACAGCCGCACCGGCCGTTGCTTGCAACCACGACGGCGGTGCCTGCCACGGCCTTCCTGATCAGCCGGCCGACGAACCCTGTATCAAATATAGTGCCACCAGCAATGCAGCATGCATCTGTCGTTCTTGATCATGATCAGTTCCACGTGCCAGCAATCCTTCTCCACCACGACAAATTTCAGCAGCAGCAGCAACAAAAGCTTGACAGGAGGTCTGCCGGCTTGGAGGAACTGATAATGGGCTGCACGTCTTCGAGCACAAAAGGAGAAGCTTCAATTCCTCACTCCCAAGAGACAGAATGGCCTTACCAGCCATACTGGACTCCTGACAACCAGGATCATCATGGATAG</cdnaseq> |
| Protein Sequence |
<aaseq>MYTSPTLLALSFALLLLILLLYYSSSLLYSQLATRRRLTHACARSLPDAYESGMNRGHISSSELIDAKLEERRISTAKHCPSCGNKLDCKPDWVGLPAGVKFDPTDQELIEHLEAKVREEGSRSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQTECDVQKGETRWHKTGKTRPVMVSGRQKGCKKILVLYTNFGKHRKPEKTNWVMHQYHLGDLEEEKEGELVVCKIFYQTQPRQCSWSSDRGGGAAATASAVTTAAVQQDQQRRRDSGSGSCSSTRDHEVSATSYSTAGYAVAAAVEMQHLKHAADHFSFAPFRKSFEEVGISGDQVHSNQLGRSEQQHAGQEQQPHRPLLATTTAVPATAFLISRPTNPVSNIVPPAMQHASVVLDHDQFHVPAILLHHDKFQQQQQQKLDRRSAGLEELIMGCTSSSTKGEASIPHSQETEWPYQPYWTPDNQDHHG</aaseq> |
| Gene Sequence |
<dnaseqindica>1..81#198..389#542..719#1258..1847#2621..2875#3916..3999#5651..5734#ATGTACACCTCTCCCACACTCCTTGCTCTCTCGTTTGCTCTTCTACTGCTCATCCTCCTCCTCTACTACTCGTCCTCTTTGGTTTGCTTCCGGCCTCTTCTTCCTGCATAGCTTCTGTTATTCGATTTCGATGATCTTGTCTTCTCCTTGAATTGTGTGTGTATTAATTAACTGTATGTTTGTTTGATCCCTTGCAGCTCTATTCACAGCTAGCAACAAGAAGGAGGCTTACACATGCATGTGCACGGTCTCTGCCGGACGCATATGAATCAGGCATGAATAGGGGGCACATCAGCAGCTCGGAGCTCATCGACGCCAAGCTCGAGGAACGCCGGATCTCCACGGCCAAGCACTGCCCCAGCTGCGGCAACAAGCTCGACTGCAAACCGGTATGTGAAGAGTGAAGTGATCAACTTCGTTTTGCCTAGCTCTTTTCAGTAATTGCACACTTGCACCTCGATCGGTAGCGAGGGTTCTTGGGCTTCTTGCTGCCTGGTGCAAAACTTGTTCTTATGGAATTAATTGGTGTAACTGCAAGAAGGATTGGGTGGGGCTACCGGCAGGAGTCAAGTTCGATCCGACGGACCAGGAGTTGATCGAGCACCTCGAGGCCAAAGTGAGGGAAGAAGGCTCAAGATCTCATCCTCTCATCGATGAGTTCATACCCACGATAGAAGGGGAGGACGGCATATGCTACACCCACCCTGAGAAACTTCCAGGTGAGAGTGAGAGAGCTAAGGTAGCTATAGCTCAAAACATTGCACCCCCCGCATAGTTTTGATACAGATATATTCCTGGCTTTTTGCAAAACTTTATCGGGTTTTTTTTGCTTTCCATGGAGTGATATATATTGTATGCTGGGATTGTTTCGCCATGAATTATGGGTCGTGGTTTTGGATTTTGGGATATGGCATATATTCCCTTGTTGTTCTTGATGTGCTCTCCCCCCTCTCTATTCTTATTACTAGTGTTTCTCTACATGTGCTCTTGGCCGGTATATGCAAAGAGAATTATTGTTTATGGAAAGTTGTGCCTAGTCTCATCTCCCACTCTCTCCTCTCTGTCATGATGGTAAGATGCTTCTGAAGTTTCCAAATAGGTTTCTTTCCTCTCTTCCTCTTTTTCAGAGAGGTTTGTTGCATCTGTCAAGAAGCATAGGCCACCCACTCCACACTATACTCTTGGATCTCACAAAACTCTCTATACTACCTTGATCCTGCTAATTATTCTGTTTGTGCTGATCGATCGATGGAGCAGGTGTGACAAGGGACGGCCTGAGCAAGCACTTCTTCCACCGGCCGTCGAAGGCGTACACGACGGGGACGAGGAAGCGGCGGAAGATCCAGACGGAGTGCGACGTGCAGAAGGGGGAGACGAGGTGGCACAAGACCGGCAAGACCCGGCCGGTGATGGTGAGCGGCCGGCAGAAGGGGTGCAAGAAGATACTGGTCCTCTACACCAACTTCGGCAAGCACCGCAAGCCGGAGAAGACCAACTGGGTGATGCACCAGTACCACCTCGGCGACCTCGAGGAGGAGAAGGAAGGGGAGCTCGTCGTCTGCAAGATCTTCTACCAGACGCAGCCTCGGCAGTGCAGCTGGTCCTCCGACCGCGGCGGCGGCGCCGCCGCCACCGCATCCGCCGTGACGACGGCGGCGGTGCAACAGGATCAGCAGCGCAGGAGGGACAGCGGCAGCGGCAGCTGCTCGTCGACGAGGGACCACGAGGTGTCGGCGACGTCCTACTCGACGGCCGGGTACGCCGTCGCCGCCGCCGTCGAGATGCAGCATTTGAAGCATGCCGCCGACCATTTCAGCTTCGCGCCTTTCAGGAAGAGTTTCGAGGAGGTAATTAATTTAATTACCACTTGTTACATGCATACTGCCACTTTTCTGTATACATACTGTATGAATCTTTGATCAGTTTTCGGAGTAATGCTGGTTAGGTTACGCATCCTAATCAGTTTCTCTCCAAGTAAACTGCTGGTTAGGTTCTGTGCCGTTTTCTGCATGCATCTTAATCAGTGCACGTCATGCAGATCATGCAAATTAACCATGGTCCATATTCCCATGCACGCATGCATGGATATATATACACTCGCTCGCATGGATATATACTGACTTTCTGTTTTTCTAGGTGCAGATTGGGATACATATACTTTCTGTTTGATTAGATGAGCTTCCTTCAATTTGTTGCGTATGGATGAGCGGTTTGGGGCGGGGTAGCTGACCAAATGTGTAGGATGCGCCAATTTAAAGCAAAAGATGAGCTACACATCACACAGCAGCATGGACCCTTTTAATTAGTTCGAGCCTCACATCATTTTACTCAGATTGCAAGCAACCCTAAAACCATCCACGATCCACCCACCGTGAAAGCAAAAACTAGTAATATATATTTTCTGAATAATTGGCCCGGTCTCATTCTTTCAATTATTCCAACCAAAAAATGTATATTTCAAGAAAGTTCAAATAATATACATACTACTGTAACATACATACTAACTGAAAGGGAGTGATAAAAGACAAATATAATGGGAACATTATGCATGTATGTTAGTTTTATAAAAAACATTATGCATGCATGACATGGAATTTTTCCATTTGTTTGCATCAAACAGGTTGGTATAAGTGGTGATCAGGTACACTCCAATCAGCTTGGGAGGTCGGAGCAGCAGCATGCTGGCCAGGAACAACAGCCGCACCGGCCGTTGCTTGCAACCACGACGGCGGTGCCTGCCACGGCCTTCCTGATCAGCCGGCCGACGAACCCTGTATCAAATATAGTGCCACCAGCAATGCAGCATGCATCTGTCGTTCTTGATCATGATCAGTTCCACGTGCCAGCAATCCTTCTCCACCACGACAAATTTCAGGTGTGATTTCATCTCATCTTATACATTTTCTCCTCAAATAAAACATTTCCATTATCTAAAATAATTCCCTAAAATTAATACTAATTTCTCTTTTTCTAGCAGCTGGGTAATAGATTGGGCACGGTAGCTGTTGAAAAAAAAAACTATAGGAACACATATATGCATGCATTTATGAAGAATATTCTTTACATATTCAGAATGTTAAATTTAAGTAAGGAGTAACAAACCATCTCCAACAAAAAACAATTTCAGGTTGAAAACAAGCAATGGACTCGCTAGGCAGTACATTTCATACTTCCCATCTAGACAAACTTAATTAGTACGGCTTGGTCTAAAGTCCACATTTTCCTCCTTCAAGCTAAGAGTTTCTTGCTATCATAGGATCCCTTTGAATTCTCTAAAAATAAACTAAAAACCATTCTCAGCTTTCAATTTCAATAAAAAGAATCAAGGATTTGTGATAATCTTAAGTGTCAAAATTAGTCATTTTTAGTTGGTCATACTAAACATATTGGGCAATAATTTATACAAATAATTGTGATATACAAAATATTAAAAAAAATTCTAGTTATGGCACTTCTAATGTTGATTTGTACATATGTAGGGTTTTTCAAGTCGTGTAATTACTATTTGATATGAACTATGTTTTTTTATATATATACCAAGGAAGTTGCATATGGATGAAATTAAGCTGTCTGAAGATGCATTTTCTAGACTATAAATATAGAGCCTAGACAATTCTGGAAGGATTCTTTGTTTACCCATATATATATGTGTAATCTGGTAATGAATCTGCTTTGTATTTCCACCGTTCCTATATATATGTATCACTTTAGGTAAATCTATATACAATTGAACTGTTTATTTCATATATATCAAGATACTAATGCATTGTCTCAGCTCATTCTTCATCTCTTTGGTGATTTACTTAATTATATTATTGTAGCTCCTTTACTTTTTTTTTTCGTTTTGCTCTTTACTAAAGAATGCTTTAGCTACTGTTCTATCCCAACATAATTAACAACGAACATGCAACACAGCAGCAGCAGCAACAAAAGCTTGACAGGAGGTCTGCCGGCTTGGAGGAACTGATAATGGGCTGCACGTCTTCGAGCACAAAAGGAGTAAGTTTCTCTTGCATTTCTATTTGATTGCCTCCTCAGCATGGATCCAAGCCGATAATTTACCAGTCAGAGGCTCTACGCATGCAGTAAAGCATTCCTGCACATATCCAATTGGAATTAATATATATGCATGTACGTAGCAATTGCATGTGAGACGCATGCATGTGTCCCTTTTAAACGGTTTTAATCTGAACATTAGCTCAGGCCAAATTTAATATAATTGTAGTTATTTATATATACTGATTTAAACATATAATACATGGGTGGGAAAGCTGCAAGCTATGTCTTATAGGCGAGGTGAGGGGTTTAGAAAAGAAAGACTGCTCAGGAGGGTCCTGAGGAAACTTCAGTGTGGGGCCTCATAGTTTCTTTGTCGTCCTAGCCAGCACTTTGAAACAGGCCCTTCACCTTGACAGCTTTTTCCTCTCATTTGTTTCCCTATTTTTAAATTCGCCATTTTAGGTGTGCTTTTACAGCAAGCATGCCGACGAGAGAGAGAGAGAGAAATCTTCAGTACTCCTAGTGAGATAGTAGATAGAAGAAACATCATGAATATATGCAAACAAGGACCACCCTTTGCTTTGCTTTTGAGTGCCAAAGGGGGAGAGCCAAAGACCAGCGTAAAAACAAGACCATACTTTCCTTGCTTTCATGACCGTATAGGTGAAAACGAGAGCTTTCTCTCCATGTCAGTAGCCCCTCTCCTCGCTTTTCTGACTGTATGGCTATAAGAATAGTTGTTTACTGTTATCTCTTGCGAAAAGAGCAAAAGAAAAGGAGGAAATATCATTCGTTTCTTGCTCTCTTTTGTCTCTTTTCTATGAAATGAATTCACACTGACACCATGCATGAGGATAAGAGAATCATTATTGTGAAATTTGTTTGCATTAATCGTTGTGAACTTGTTCTTGTATTACATTACTAAAAATTAAAATCTTGACATTTACAAGGTAGTATATGCATGCACGTTCAGGTAATATAGAACAAAAGTGTACTTATTTTTGTCAAAACTCCATTGGATGATTAGACATTAGTACATCCGTCTCAAAATATAATAACTTTTAGCTACGAATTTAAACAAGAGTATGTCTAGATTCGTAGTCAATAATTGCTATATTTTCGAACAGATCAAGGTAGTAATGATATGTGTATTGCATAGTTATTCAATGAGATCGTTCTTTGACATGTTGGCCTCATTAATAATATGGTGCAATGCGTTATATTGGAGATCAATCATTCTGACCCCGACTATATACTCCGTATAAGTAAGTGACAAAAAGAGTTATGCCTTACTACTTTTCCCCTCCTTTGTTTTCGCGTTGAATTATATGGGAGATTAATTAATAAAGTACTGTGACAACACAACTATAGTACTACTAGTCTACTACCGTGGTATCTGCTATATCTCTCACCAGAGATCCGAATTGGCTACCTTGATATTATTTAAATGAACATTTCTGGTATCATCTGGAGTGTAAATAAGAGCAAGTACTATAAAACTTGCTCTAAGGTAGTCCGTACTTGAACAGTTGAAAATTTTGAATTATCTCCCTACTGACATTTTAAAGTGATACCGTATCTTTCTTATTCAACTGTTGCACTTCACTGAGCTGATCTTTTTTGACCCCCCCTTTTCCATATTCTATTGCAGGAAGCTTCAATTCCTCACTCCCAAGAGACAGAATGGCCTTACCAGCCATACTGGACTCCTGACAACCAGGATCATCATGGATAG</dnaseqindica> 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| External Link(s) |
