Difference between revisions of "BGIOSGA004186"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA004186|
Description = Putative uncharacterized protein|
Definition = Oryza sativa Indica Group BGIOSGA004186, complete gene.|
tag = OJ1117_...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA004186| | GeneName = BGIOSGA004186| | ||
Revision as of 18:28, 20 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA004186 |
|---|---|
| Description |
Putative uncharacterized protein |
| Definition |
Oryza sativa Indica Group BGIOSGA004186, complete gene. |
| LocusTag |
OJ1117_G01.3 |
| Ensembl Transcript ID |
BGIOSGA004186-TA |
| Ensembl Protein ID |
BGIOSGA004186-PA |
| Length |
5897 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:31006478..31012374 |
| Sequence Coding Region |
31006478..31007826,31008621..31008812,31009126..31009207,31009289..31009477,31009602..31009715 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome01:31006478..31012374 source=RiceIndica01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome01:31006478..31012374 source=RiceIndica01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCGGCGCCGCCGCCGAGCGCGACGGTGGGGCTGATTCCCAACCTGGCGGGGCGCGGGGTCTTGCTCCCCGCCTCGGCGCCTGATTCGAGCGCGTGCCACGGGTTCGTGGTTCCGACGAGGAGGAGGAGGAGGGTCTCCGTGGCGCCGTTTGGTTGGGGTTTGGCGAGGAGAGGCCGGGTTTCTGACGCGAGAGCGGATGGTTTTGGTGCTATGTGCGCGGTGGCTGGCGGCGAAGCTGGTCCCGGTTCGTCCGAGTTGCGGCACGTCGAGAAGGAGCTGACGTTTAGCCCGACTTTCACCGACTATGTGAAGATCATGGAGTCGGTGAAGTTGGACAGGAGCAAGAGTTTAGAGAGCACAGAATCGGATGGAAGGAGCTCGAGGAGGAGATTTACAGGCGATGGCGATGCACCGGTTGTTCGGCGAGGGGACGAGAGGTCAGGTGATGGAAGGAGTACATCTTTTGATAGGCAAAAGGGATCTCAGAGGAACAGAGGGGATGTGAATGAGAGGAGCATGGCGAATAATGATATTCAGAACAATAGTATTAGGTTAGTAGAGAAAAAAAAGCCAGGTGATGTTGAAAAGCGTCGGGGAAGACAGGGAAAGGTAGATGAATATGTACAGAGAAGAATTGTTCGAGGTGAGATTAGTGAAGATGAAGGTAATGTTGATAAAAATGAGCGCAAGCAGTTTACATCGCAGTTGAAGATGAAAGATACTAGAGGTAGTATGGTTGCTCATCAATCAGAGAGAAACATGCATGTTCAGTCAAATGCACGGAAGGGTTTGCAACGACAGTCGACTTCGATGGTAAGCCATATTTCTAGCCCTCCAAACAGCAGAATTATATTGGAGAACACCAAGTCTTTGGTAAAAAGGGGAAAGGAGAACTTTAGTAGCCCAGCAAGAAGCATATATGAGAACAATTTCAAATATCCCAGAGAAAGAAAATTTACCAACTATGATGTCAATGCTGATGATAAATTTCAAAGATACCAGCAAACAACAGAAAATTCAGGGAGAGGTGTTGTAGTGGGAAGGTTTGGAGAGGGTGATATTGATTATAACAAGGCTACTGTAAGCAAAAGATATGGCAATAGGCAGGCAACGTCTGGGCATGATGGTCATCCAACGGTCAGCTTGAAGCGTGGAAAACCTGAAGCAATTCGAATGCAGAGAGGGGAAAATGTCCAAACAGGGAAGTTTATTAGGAGAGATGCGAAAGCTATAGACTTGGACGATAGAGCTGCTTTCAAGACTTTTGAGGTATTCACTGATGTCAGAAACAGGCCACGGGTTCTTCAAATGGAACTGGAAGATAGAATTCAGAAATTGGCTAGTCGGCTGAATGCTACAGATGTAAATACTCCAGAGTGGAAATTCTCCAAAATGATTCATGATGCAAAAATCAAATTCTCTGACCACTCTATCCTAAGGGTCGTTCAAATACTGGGTCGATATGGAAACTGGAAACGGGTCTTGCAAGTTGTTGAATGGCTTCAATCCCGTGAAAGATTCAAGTCCTACAAGAGCAGGTATATTTATACAACAGTGCTTGATGTTCTTGGGAAGGCAAAAAGACCTTTTGAGGCATTGAATGTATTTTACACCATGCTGGATCAATTGTCTTCTTATCCTGACATGGCTGCTTATCATTGTATTGCTGTGACTCTTGGCCAATCTGGTCTTGTAAAAGAGCTATTTGATGTGATTGACCGCATGCGTTCTCCTCCTAAGAAGTTTAAGCTAAGTCCTATTCAGAATTGGGATCCTAGGTTGGAACCAGACCTCATTGTGTACAATGCGGTTCTGAATGCCTGTGTGCAACAAAAGCAATGGGAAGGAGCATTCTGGGTTCTGCAACAGTTGAAAGAGAAGAACATCCGCCCTACAAATACAACATATGGTCTTGTAATGGAGGTAATGCTTGTTTGTGGCAAGTACAACTTGGTGTACGAGTTCTTCAATAAGGTGGAGAAAACGTCAATACCCGGCGCTTTGAACTATAAAGTTCTCATTAATGCTCTTTGGAGAGAAGGGAAGATTGATGAAGCAGTCATGGCTGTCAAGGGTATGGAAAGTCGTGGAATAGTTGGTTCTGCCAGTCTTTATTATGACCTTGCTAGGTGCCTTTGCAGTGGAGGCCGGTGCAAAGAGGCACTTCTCCAGGTCGAGAAGATTTGCAAGGTTGCAAACAAACCACTGGTTGTTACCTACACAGGACTGATCCAAACCTGTATAGACAATGGAAGCATGGAAAATGCTAAATACATATTTGACGAAATGTGCAAATACTGCTCACCTAATAACGTAACATGCAACATCATGCTGAAGTCATACACTGAACATGGAATGTTTGAGGATGCAAAAGATCTATTGGAGAATATTCTCAGTGGCAGGATAAGGAGTAAAGTGGAATCGAGTCAAAAGGCAATTGCAGACAAGTTTACTTTCAATATTTTCATGGAGGCCTGTGCTGAAGCAAAGAGGTGGAATGATTTTGAGTATGCATTTCGCAAAATGTTATCTAGTGGCTACCACTTTGACGAACGAAGGCACCTTCATATGGTGCTTGATGCATATAGGAACGGGAAGGAGCAGTTATTGGAAGATGTATGGGACTACATGTGCCAATATGGCCGAGTTCCGCCTGCCCCCATGATAATGGAAAGATTTTGCCTGAAACTGAGACAAGGGGACACAGTGGCGGCGATGTCCTGCATCAATACCTTTCAGGAGAGCAAGATACGCAATGTTTCATCCATGTCCTGGTTCAATCTGCTGAACCGTAATGGGGATCGCTTGAAGGAGGATATTATTATCAAGCTACTTCATGAACTCAACAACCTTGTAAGCTCAAGTGGTCACTCTGATTCTTTGTATCAAAATATTATAAGTAGCTGTACAGAATTCCTTTCTGTTTCCACCTCTGTAGAAAAGGCGTCTTCTGATCAGCAGATGCTTCCCTGTACGTCATAG</cdnaseq> |
| Protein Sequence |
<aaseq>MAAPPPSATVGLIPNLAGRGVLLPASAPDSSACHGFVVPTRRRRRVSVAPFGWGLARRGRVSDARADGFGAMCAVAGGEAGPGSSELRHVEKELTFSPTFTDYVKIMESVKLDRSKSLESTESDGRSSRRRFTGDGDAPVVRRGDERSGDGRSTSFDRQKGSQRNRGDVNERSMANNDIQNNSIRLVEKKKPGDVEKRRGRQGKVDEYVQRRIVRGEISEDEGNVDKNERKQFTSQLKMKDTRGSMVAHQSERNMHVQSNARKGLQRQSTSMVSHISSPPNSRIILENTKSLVKRGKENFSSPARSIYENNFKYPRERKFTNYDVNADDKFQRYQQTTENSGRGVVVGRFGEGDIDYNKATVSKRYGNRQATSGHDGHPTVSLKRGKPEAIRMQRGENVQTGKFIRRDAKAIDLDDRAAFKTFEVFTDVRNRPRVLQMELEDRIQKLASRLNATDVNTPEWKFSKMIHDAKIKFSDHSILRVVQILGRYGNWKRVLQVVEWLQSRERFKSYKSRYIYTTVLDVLGKAKRPFEALNVFYTMLDQLSSYPDMAAYHCIAVTLGQSGLVKELFDVIDRMRSPPKKFKLSPIQNWDPRLEPDLIVYNAVLNACVQQKQWEGAFWVLQQLKEKNIRPTNTTYGLVMEVMLVCGKYNLVYEFFNKVEKTSIPGALNYKVLINALWREGKIDEAVMAVKGMESRGIVGSASLYYDLARCLCSGGRCKEALLQVEKICKVANKPLVVTYTGLIQTCIDNGSMENAKYIFDEMCKYCSPNNVTCNIMLKSYTEHGMFEDAKDLLENILSGRIRSKVESSQKAIADKFTFNIFMEACAEAKRWNDFEYAFRKMLSSGYHFDERRHLHMVLDAYRNGKEQLLEDVWDYMCQYGRVPPAPMIMERFCLKLRQGDTVAAMSCINTFQESKIRNVSSMSWFNLLNRNGDRLKEDIIIKLLHELNNLVSSSGHSDSLYQNIISSCTEFLSVSTSVEKASSDQQMLPCTS</aaseq> |
| Gene Sequence |
<dnaseqindica>1..1349#2144..2335#2649..2730#2812..3000#3125..3238#3630..3720#3792..3949#4560..4985#5514..5897#ATGGCGGCGCCGCCGCCGAGCGCGACGGTGGGGCTGATTCCCAACCTGGCGGGGCGCGGGGTCTTGCTCCCCGCCTCGGCGCCTGATTCGAGCGCGTGCCACGGGTTCGTGGTTCCGACGAGGAGGAGGAGGAGGGTCTCCGTGGCGCCGTTTGGTTGGGGTTTGGCGAGGAGAGGCCGGGTTTCTGACGCGAGAGCGGATGGTTTTGGTGCTATGTGCGCGGTGGCTGGCGGCGAAGCTGGTCCCGGTTCGTCCGAGTTGCGGCACGTCGAGAAGGAGCTGACGTTTAGCCCGACTTTCACCGACTATGTGAAGATCATGGAGTCGGTGAAGTTGGACAGGAGCAAGAGTTTAGAGAGCACAGAATCGGATGGAAGGAGCTCGAGGAGGAGATTTACAGGCGATGGCGATGCACCGGTTGTTCGGCGAGGGGACGAGAGGTCAGGTGATGGAAGGAGTACATCTTTTGATAGGCAAAAGGGATCTCAGAGGAACAGAGGGGATGTGAATGAGAGGAGCATGGCGAATAATGATATTCAGAACAATAGTATTAGGTTAGTAGAGAAAAAAAAGCCAGGTGATGTTGAAAAGCGTCGGGGAAGACAGGGAAAGGTAGATGAATATGTACAGAGAAGAATTGTTCGAGGTGAGATTAGTGAAGATGAAGGTAATGTTGATAAAAATGAGCGCAAGCAGTTTACATCGCAGTTGAAGATGAAAGATACTAGAGGTAGTATGGTTGCTCATCAATCAGAGAGAAACATGCATGTTCAGTCAAATGCACGGAAGGGTTTGCAACGACAGTCGACTTCGATGGTAAGCCATATTTCTAGCCCTCCAAACAGCAGAATTATATTGGAGAACACCAAGTCTTTGGTAAAAAGGGGAAAGGAGAACTTTAGTAGCCCAGCAAGAAGCATATATGAGAACAATTTCAAATATCCCAGAGAAAGAAAATTTACCAACTATGATGTCAATGCTGATGATAAATTTCAAAGATACCAGCAAACAACAGAAAATTCAGGGAGAGGTGTTGTAGTGGGAAGGTTTGGAGAGGGTGATATTGATTATAACAAGGCTACTGTAAGCAAAAGATATGGCAATAGGCAGGCAACGTCTGGGCATGATGGTCATCCAACGGTCAGCTTGAAGCGTGGAAAACCTGAAGCAATTCGAATGCAGAGAGGGGAAAATGTCCAAACAGGGAAGTTTATTAGGAGAGATGCGAAAGCTATAGACTTGGACGATAGAGCTGCTTTCAAGACTTTTGAGGTATTCACTGATGTCAGAAACAGGCCACGGGTTCTTCAAATGGAACTGGAAGATAGAATTCAGAAATTGGCTAGTCGGTAAGTCTTTGTATGATTGGTTTTACAGCCTGTATTGAATTTGTTGAGTTGTCTTGGTTTTGCTGTTGTATAAATTCATCATAATAGCCTCTTCTAATTTGAAAAAAAAAAAACTCATGACGGTATTCTGTCCCATCAAAACTACTTGACACTGCCTCTGCTGCAGGTTGTTTGATGGGCATTAAGTATTTTTTACAAGAGGGAGTTGCCTATATGTAGCCCTTAGCATGAGTGTTACTTCGTTTGAAAATCTCAGGGCGTTCTAGATTCTATTTGAACACTCATGTATTCACCAATTTTACCATCGTTGTTCACATCCAATAGAAGAGGACACTGACCACCTCTTTTTAATTGATCACATTAAACTACATGATGTACTTCCAGTGACATGAATTTCGTTTTGATAGATAATGAGTAATAACACTGGGCTTCTATCAAGATTGCTGCTCAAATATATTGTATCAATACTTGCTTATTTACAGGCTCCTGAAAGTGAGATGTTACAAGAACAGGCATATGAAAACTGTTGTCCGATAATTCCCACTCTAAAATTATGTGTGAACTTTTTTTTTTGTGATCATGTTATCTAGATGCTACTTGCTTGGAGAATTCTTTCATGCATTTAAGACAATATTACATGAATGGGACTTCTAGATTGAACTTAGAAAATACTTTCATTCATTGATGAGCATCTTGCTTTCCTATACATTTTTTGTTGCTTCCTAGACAAGTCATTGAGCCTATGGAGTCTTCGCTGTCTTAGTTAATTCTTTATGGTTATTTATTTTGTGAAGGCTGAATGCTACAGATGTAAATACTCCAGAGTGGAAATTCTCCAAAATGATTCATGATGCAAAAATCAAATTCTCTGACCACTCTATCCTAAGGGTCGTTCAAATACTGGGTCGATATGGAAACTGGAAACGGGTCTTGCAAGTTGTTGAATGGCTTCAATCCCGTGAAAGATTCAAGTCCTACAAGAGCAGGTAATGAAACAGTTACCCATTTATATGTTAATATATTATTGTGAATCTTAAAGCTGCAGTGTTAGTTTATATATGTATATTTCATTTTTTACCGCTGTTATAGACTTATATTGTTGTTTATGTAGCAGAGTATAATGTGTACTAAGTTGTCTGTGATGAAATAAGTTTGCTTCTTCATTTGTTCAATCTTGTAGTTTCTTTTTTTGTTTCTCTTGGGTAACCTGTAAGTCCTTAAGAATCACATTAAATGATTTACAATGCTTATCATATTAAATGCGTATGATGTTCATGAGAGAACATATTTGTTTTGTAGGTATATTTATACAACAGTGCTTGATGTTCTTGGGAAGGCAAAAAGACCTTTTGAGGCATTGAATGTATTTTACACCATGCTGGTATAACTAGCGCTCATCTGTCTTATGTTTGGATGTACCTAATCTTTCCATTTAGATGATGTCCTTATATTTCATCTGCAGGATCAATTGTCTTCTTATCCTGACATGGCTGCTTATCATTGTATTGCTGTGACTCTTGGCCAATCTGGTCTTGTAAAAGAGCTATTTGATGTGATTGACCGCATGCGTTCTCCTCCTAAGAAGTTTAAGCTAAGTCCTATTCAGAATTGGGATCCTAGGTTGGAACCAGACCTCATTGTGTACAATGCGGTGAGTGACACTTTTAGCAAATGTTCTATGTAAGTGAGTGCACCAATGACAATGAGACATGATTGTTTGATATTGTTGGTAATTTAGTATTCAGTAGAACGTAACTGGCTCTACTGCTATGTAGGTTCTGAATGCCTGTGTGCAACAAAAGCAATGGGAAGGAGCATTCTGGGTTCTGCAACAGTTGAAAGAGAAGAACATCCGCCCTACAAATACAACATATGGTCTTGTAATGGAGGTACGGTAATCTTGATTACATATTCTCTCTGTCCTCCCCTAAACCAACTGTGCTGGTCATGCAGAAATGCGACTGCAAATCTTTTATGATTTTATGGAATTAACACGTAATTTGCACCGTGTTCTGCATGCATGGGACTATACATATGACTCATGACAGTTTCAGAGACCATTTCTGCATCGATGTTTCTCTTACCTGGATTCTGACAAGCATATTATATCTATCTACAGCAGATAGAATGTTTTGCTCATATGTTGGTCTTAGGGAAAACTGTTGCTTAACTTGGTTCCATGCGATTTCCGTAGTATTGATTGTATTTTTTTTTCATATGTTTGGCACAATTCTTTATGCAGCGTAATCCATTTTTTGTTATAATTTTGTGGTACTGTAGGTAATGCTTGTTTGTGGCAAGTACAACTTGGTGTACGAGTTCTTCAATAAGGTGGAGAAAACGTCAATACCCGGCGCTTTGAACTATAAAGGTAATTAAGAAGGTTTGAAAACAGTTGAAGGCAAATTTTATATTATATCTCATATCTCTTGCTGCTTGCAGTTCTCATTAATGCTCTTTGGAGAGAAGGGAAGATTGATGAAGCAGTCATGGCTGTCAAGGGTATGGAAAGTCGTGGAATAGTTGGTTCTGCCAGTCTTTATTATGACCTTGCTAGGTGCCTTTGCAGTGGAGGCCGGTGCAAAGAGGCACTTCTCCAGGTTTGCACTTGCAAAAATATAGTTATATCTTGTACATGACACACTTGCTGTGGCTGTTGTTGCAACTGAAAATACATTTTGCCACCTATAGTCATCTTGAAAATTAAACGTAGATCTATAATTCTATATTGGACTTAGAACCTCAGCTGCAAACTGATTCTTCATTTTTTTAATAACCGATAGCAGTTATTCTGCTGGTTTTAACAATTTATCGGCATTTTACTGTCATTAGTTGCTTTCGTGACCATAACTTTTACTCTAATCCCGATTTCTCACTAGATAGAACATACATAATCACAATTGCGAAAAGCATATTCTTGTTGAATTAGGCACTGTGTGTTGGTATATGAGACTATATGCATATATATTTTTGATAGATGAACCAATAGGCTGGAATTTAGTTCCCACAGTATAATTATCGGTGCGAGCTTCAAATCCAATTAACTTACTTTTTGTAAAACAAGCTGAAAAAACTTATCAAACAGCCAGGCATAAGAACTCAGCTTGAACATGTCTATCTGTAAGCGCCATCACCTGTCTATGCTTGTCTCATGCCTCTAGATGCTTTGTTTTATCTCTTAACCTTTTTCTGATGGCAACTGTAATGCAGGTCGAGAAGATTTGCAAGGTTGCAAACAAACCACTGGTTGTTACCTACACAGGACTGATCCAAACCTGTATAGACAATGGAAGCATGGAAAATGCTAAATACATATTTGACGAAATGTGCAAATACTGCTCACCTAATAACGTAACATGCAACATCATGCTGAAGTCATACACTGAACATGGAATGTTTGAGGATGCAAAAGATCTATTGGAGAATATTCTCAGTGGCAGGATAAGGAGTAAAGTGGAATCGAGTCAAAAGGCAATTGCAGACAAGTTTACTTTCAATATTTTCATGGAGGCCTGTGCTGAAGCAAAGAGGTGGAATGATTTTGAGTATGCATTTCGCAAAATGTTATCTAGTGGCTACCACTTTGACGAACGAAGGCACCTTCATATGGTGCTTGATGCATATAGGAACGGGAAGGTGCTTATCTCATATTCCTAACTCTTTAACTATCCATGAATCTCCGTAAGATGTAGCTTATAAGGATAGAATATTCGTTGTGCATAATCTTTCATATCTGAAGTTGAAGATGTTTGGTTCATAACATAGGTCATGTTATCGCAATGAATGGAGGATGTTTGATTATGCTGTTTTTCCCCCATATGTATGTGATCATAAGATTGCATGGTGACTGATCTTAGTAGTTCTGAAATCTATACATGTGGGCCTTTTAGCTTATATTTCTATGCCCTCAGAGAGAACAAACCTCACTAGATTTAAAAGGAAATTTCAACTACAAGCACAGCATAATAGTACTAGCCCCAGTTTGGCAACAATTTGAGCCAATTCCTTCAGTATTTTATGGCTTACTGTCAATATGAACTATGCTTAGAGTTCAGATTTTATGGACAATGATAGAATGCAAGATATATGATCATTTTCCCATTAAACTGCTTCGTTAATTATTTGGTGTAGCTATTCTTAGCCTTACTGCCTTTCACTATTCAGGAGCAGTTATTGGAAGATGTATGGGACTACATGTGCCAATATGGCCGAGTTCCGCCTGCCCCCATGATAATGGAAAGATTTTGCCTGAAACTGAGACAAGGGGACACAGTGGCGGCGATGTCCTGCATCAATACCTTTCAGGAGAGCAAGATACGCAATGTTTCATCCATGTCCTGGTTCAATCTGCTGAACCGTAATGGGGATCGCTTGAAGGAGGATATTATTATCAAGCTACTTCATGAACTCAACAACCTTGTAAGCTCAAGTGGTCACTCTGATTCTTTGTATCAAAATATTATAAGTAGCTGTACAGAATTCCTTTCTGTTTCCACCTCTGTAGAAAAGGCGTCTTCTGATCAGCAGATGCTTCCCTGTACGTCATAG</dnaseqindica> 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| External Link(s) |
