Difference between revisions of "BGIOSGA004947"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA004947|
Description = 4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol|
Definition = Oryza sativa Indica Group BGIOSGA004947, complete gene...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA004947| | GeneName = BGIOSGA004947| | ||
Revision as of 18:32, 20 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA004947 |
|---|---|
| Description |
4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol |
| Definition |
Oryza sativa Indica Group BGIOSGA004947, complete gene. |
| LocusTag |
P0408G07.39 |
| Ensembl Transcript ID |
BGIOSGA004947-TA |
| Ensembl Protein ID |
BGIOSGA004947-PA |
| Length |
2825 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:42172099..42174923 |
| Sequence Coding Region |
42172099..42172213,42172410..42172492,42172606..42172674,42173158..42173213,42173306..42173385 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome01:42172099..42174923 source=RiceIndica01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome01:42172099..42174923 source=RiceIndica01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGAGCTCCGCCTCTGCCTCCGCCTCCACGCGCCGCCCGCCTCCGCCCCGACGACGCATCCGCCGCCGCCGCTGTCGCCGTCGCCCAATCTCGCGCTCCGCCGCCTCCGGACCGGTGGGAGCTGTGCGGTTGCTCCGCGGCGGCACGCGAGGAAATGGGGTTCGGCTGTCTGCGCCGCCAAAGCCGACGGCGCGCAGGGTGAGGCCGTGAAGGAGAGGAGCGTCTCGGTGGTGCTCTTGTCCGGCGGGCAGGGGAAGAGAATGGGGGCAAGTATGCCAAAACAATATCTACCATTATTGGGGCTGCCGATTGCACTGCACAGTTTAAAGACATTCTGTCAGCTGAAGGAAGTAAAAGAAGTTGTAGTGGTGTGTGATCCAGACTACAAAGATATATTTGAAGGCTCTATTGAAAATGTGCAAATACCAATTAAATTTGCACTCCCAGGGAAAGAGAGACAAGACTCTGTTTATAATGGACTACAGGAGATTGATGGAGACTCTGAACTTGTTTGTGTACATGATTCTGCAAGGCCCTTAGTGTCATCTGAAGATGTCAAAAAGGTATTAGAAGATGCTATAGTGCACGGAGCTGCTGTTCTTGGTGTGCCTGTGAAAGCTACTATCAAGGAGGCTGACAGCAATTCTTTTGTCGTAAAAACACTTGATAGGAAAACTCTTTGGGAAATGCAAACTCCACAGGTGATGAGGCCCAGTTTACTCAGAGATGGTTTTGAGCTAGTTAAACGGGATGGACTTGAGGTCACTGATGACGTGTCCATTGTAGAATACCTGAAGCACTCTGTTTATATCACAGAGGGCTCTTACACAAACATAAAGGTGACGACTCCTGATGACTTGCTCCTGGCTGAGCGCCTGATGAATGAGAAATAA</cdnaseq> |
| Protein Sequence |
<aaseq>MELRLCLRLHAPPASAPTTHPPPPLSPSPNLALRRLRTGGSCAVAPRRHARKWGSAVCAAKADGAQGEAVKERSVSVVLLSGGQGKRMGASMPKQYLPLLGLPIALHSLKTFCQLKEVKEVVVVCDPDYKDIFEGSIENVQIPIKFALPGKERQDSVYNGLQEIDGDSELVCVHDSARPLVSSEDVKKVLEDAIVHGAAVLGVPVKATIKEADSNSFVVKTLDRKTLWEMQTPQVMRPSLLRDGFELVKRDGLEVTDDVSIVEYLKHSVYITEGSYTNIKVTTPDDLLLAERLMNEK</aaseq> |
| Gene Sequence |
<dnaseqindica>1..115#312..394#508..576#1060..1115#1208..1287#1429..1511#1615..1692#2066..2134#2299..2367#2453..2499#2589..2679#2772..2825#ATGGAGCTCCGCCTCTGCCTCCGCCTCCACGCGCCGCCCGCCTCCGCCCCGACGACGCATCCGCCGCCGCCGCTGTCGCCGTCGCCCAATCTCGCGCTCCGCCGCCTCCGGACCGGTAAGGATCGCCTCCGGGCCTCCCCCTGTCGGCGCCGCTTCTCCGTCCCGCATGCTGCGACCCGCGCTCCGATACCGTACGGGAGCCATGGCGCTCAACTCGCGGAGCTCCGGTTTGGGGATTCTCGTTGCTTGCCGTGCTGATGTGATGCCTTCGGTTTGTTTTTTTTGTGTGGGTCGCTCTTGTCGTGGCCCAGGTGGGAGCTGTGCGGTTGCTCCGCGGCGGCACGCGAGGAAATGGGGTTCGGCTGTCTGCGCCGCCAAAGCCGACGGCGCGCAGGTGGGACGATGTGGCACCGCGCGCTTGCTTCCGCGATTTTTCGAGTTGACCAAGTGAAAGTGCTGTACTGACGACGCGGGGATTTTTTTTTTTTTTTTTTTGGGTTTCGTCAGGGTGAGGCCGTGAAGGAGAGGAGCGTCTCGGTGGTGCTCTTGTCCGGCGGGCAGGGGAAGAGAATGGGGGTATTGTTCTCTCCTCTGCTCTGAAACTTGATCTGAATGGCTGTTTCGTTTGATAATCGATGCCCCTAGCTGATAATGCATCCTGTGCTTTGGTTTAGGCTCGCCCCTTTCATCATTTTGGGAAATGAATTTGAGCTTGCCCGTTCGAATGGGATAGATTTCATTTCGCATTAATGGGCTGTTCTTGGTTTGTTACGGCTTGCTGTTTACTCAGAATAGCTTTTATTTTATTGCTGAAACTCCTATTTGTCGGAATTTTTACAGAAAAGTTCATTTTAGGAATTAGGCAAGGTTGTTCATCCTACGGAATGTTAGGAATGGAACAGACTGCAGAGTTTCTTGTTCAATATTAGATGTGTGCAACGAAATGTGCTTTGTTATTTGGCATTTAAGTTATCACATCCTTCCAGTGTGATTTTTTCTGAAAGAAGCCTTGCAGAGAATGACTGCTGTGTCTGAATTCTCGTCCACCTTTTGCAACAGGCAAGTATGCCAAAACAATATCTACCATTATTGGGGCTGCCGATTGCACTGCACAGGTTCATTTCTTCAGCATAGTTTCCCTCTCTTCTAGGATTCTTTCATCCTACAATGTGATTCAGACATGGGCTTCCTACATTGTATCGTGCAGTTTAAAGACATTCTGTCAGCTGAAGGAAGTAAAAGAAGTTGTAGTGGTGTGTGATCCAGACTACAAAGATATATTTGAAGGTTCCTAAGCTGACTAGTCTCATCCTATTTTCACTGTGTTCACCCATTCTTTTATCTGCTTATCACTTAAACTCTGTCAACTTCAAATTCTGTGACTACAATTGTTTGAGTAAGTGGCCATGTTATCGTTCACTTTCTCAGGCTCTATTGAAAATGTGCAAATACCAATTAAATTTGCACTCCCAGGGAAAGAGAGACAAGACTCTGTTTATAATGGACTACAGGTTAGTAGTAACCCACTTTTATGTTGCTGCTTTGGACACAAATTACAAATATAGTACGGTATAATTTCCTTTCTGTTCTAACTTTGTTTTGTGTCCTCTGCAGGAGATTGATGGAGACTCTGAACTTGTTTGTGTACATGATTCTGCAAGGCCCTTAGTGTCATCTGAAGATGTCAAAAAGGTAGCTCCTCCTGTGATCAAGTTGTTTTCAGATGTTTCCCTTTGGTGCTTTGCTGTTCTAGAATATTGATAAATCATCTTTCATAGCTATCAACCAACGAGAAATTCACTCTCTCTTGCAATTTGCAACCTACATTTTGTTTATATGGACTACATGTACAATTTCAATGTTTATATTAAACAAATTACCCCATTCCCAACCCTTCTGTATTTTGTTGAGAACAAGAATTTTCTCTGTCTTTGTGGCTTGACAAGTATATGTTTTGAACTTCTGATGCACAGGTAGTTTTATAAATAGGAAAAGGGAATAGCTCTAGCCTCCAGGTGCTTTGCAGTCTGCTAGGAATCATATTGATTTTCATTTCATTGCTTAGGTATTAGAAGATGCTATAGTGCACGGAGCTGCTGTTCTTGGTGTGCCTGTGAAAGCTACTATCAAGGAGGTGAGTGTTTACCATCCAGATGATGATCAGTTCGATGAGCTTACAAAGATCTTTGGCAACTTTTCATCGAACAATTATCCAATGTGTTCAGTGAACTTTCATTGTGCAGTAAAACCTTGATATTCAGGCTTGAGGGCGTAATACTTTTCACCTTTCTTCTTCAGGCTGACAGCAATTCTTTTGTCGTAAAAACACTTGATAGGAAAACTCTTTGGGAAATGCAAACTCCACAGGTAAGCACACACTATTTTCTATGTAATCTGTAAAAGAAAAGTGTTTCATGCTTTCAGAAATTACAAAGAAATGTTCTCATTGTAGGTGATGAGGCCCAGTTTACTCAGAGATGGTTTTGAGCTAGTTAAACGGTTATCTTTCTTGTCTTAGCTCGGTAAATCGAATTCAGAGATATCCTGATTCTCAATTTTTGTTGATGATCATACTTTACATTTCGCAGGGATGGACTTGAGGTCACTGATGACGTGTCCATTGTAGAATACCTGAAGCACTCTGTTTATATCACAGAGGGCTCTTACACAAACATAAAGGTATTCCAAATTAGCTCTTTGAACATTAATATTTTTGTCTGCTAGGTTTGAACTTTGAAGAGATCGATTGTCAAAATGTGAATCTATTGCAGGTGACGACTCCTGATGACTTGCTCCTGGCTGAGCGCCTGATGAATGAGAAATAA</dnaseqindica> |
| External Link(s) |
