Difference between revisions of "BGIOSGA005006"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA005006| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA005006, complete gene.| tag = OSJNOA1...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA005006|
 
GeneName = BGIOSGA005006|

Revision as of 18:33, 20 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA005006

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005006, complete gene.

LocusTag

OSJNOA108M02.4

Ensembl Transcript ID

BGIOSGA005006-TA

Ensembl Protein ID

BGIOSGA005006-PA

Length

1924

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43100534..43102457

Sequence Coding Region

43100534..43101198,43101293..43102457

Genome Context

<gbrowseImage1> name=IndicaChromosome01:43100534..43102457 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:43100534..43102457 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCGCCGCGGCAGGGAAGGCAGCGGAAGACGTCGCGGCCGCGTCGACGATGACGCGCGCCGAGTACCGGCTTGCCGTTGCCGAGCAAGTCATACTCGGGTGGCACTGCGCGCGCTCGTCCGGCGCCGACCTCGCCGGCGTATGGGACTCGGACGCGACCTGCACCAACGAGAGCCTCCTCTCCGCGGTCGACGAGGTCCTCCTCCTCGCGGAGATCCACGCGTTCCCCATGGCCTCCGCCGCTCGGCGCAGCATGCAGGATGCCCTCGACGTCGCCGTGTCATGTCTAATGGAAGAATTCCTTCGCCTCAAGGTGTGGGACGCTTCCCAGATGGAAGTCAGGCTCGGCGTTCGCTTCGCCGTCGGGAAGTTCTCGATGCCCGCGGCGGACAGTGGAGTGTCGCTGTCGCTCGCCTTCCCCACCACCGGCAGCATCAGCACGGCGAGCACCATCGACGAGCTGTACGCGTCAGGCGGGAGCCAGTCGAGCAGAGTTGGCGCGGTGACCATGCTCTTGGACGGCGAGTTCTTTGATGAGCTCGATCTGATCAGCCCGGCAAGCTTGTCCGTCCTCCATCAGATCGCTCTCCGGGTGATCCGCGCCGGCTACACGAAAGAACTGCTCCACGCATTCACCAACGCTCCCTGCGATGTTTTAGACAGGTTCCTGACGATCCTTCAAATGGAATGCGCTTTCGAAACCGACCATGTCAGTTTCGAGGACGCGGAGTGGTGGACAGCAGAGGACATGATCAAGCGGTGGATCTTGGCAACAAAGCTCGTCGCGAAGGCCCTCGCCGTCATGCAAAGGCAGCTCCAAGCACAGAGCTGCGGAGCGTTCGACAGGTTCAAGAACGATTACTTCATGGCCATCGCGAAGAACAGCATCTTCGTCCTGCTCAGATTCGCGAACGGGTTCACTACCACGGAAGCACCGGACAAGCTCGTGTATGTCCTGGAAATGTACGAGGCACTGAGCAACGCGACTCCGGGACTCCTGCTCCTGTTCACCGAGCAACGCGTTGAGCTCGTCTCCCGGCAGGTCGAGGTTGTTCTCGCCAAGCTGGCGCGCGCGCTGAGAGCCATGATCGGCGGCCTCATCGCCAGGATCCGAACGGCAGATTGTCCCCAGACGACGGGGAGCGCCGCGCGCGGCGTCGGCGTCCATCCGCTGACGCGGTACGCCATGACCTGCGTCGAGCTGCTGTCGCCGCACCGCGCCGCGCTGGACCTGATCCTCGCGAACGGCGCCGGCGAGAGCGTGACCTCGCTGGGAAGCCTAGTGGCGGTGCTCGTCACGAGCCTGGAACGACACCTCGAGGAGATCAACCCCAAGCTGTCCAACGACGACGACGACGCGGCTGCAGCAGCCGCAGCCTCGCGGCACCTCTTCCTGGCCACCAACGCGAGCTACGTGGCGAGACGCGCCGTGGACGCCGGCGTGGAGCCTCTGCTCGGAGACGGGTGGGCCGCGCGGCGCGGGAGCCTGATCGCGCGGTACGTGGCGAGCTACGTCGAGGCGTGTTGGGCCCCGGTTGCGGCTTGCCTGGAAACCGCGGGGAGGAAGCCGGTGAAAGTTGCCGCCAAGTTCAGCTCCGCGTTTGACGAAGCGTACGAGAGTCAGGTGCACCGCGAGATTCCCGATCCCGCGCTGCGCGACGCGCTGCGGAAGGCCGCGTCGGAGATGGTCGTTCCCGCTTACAGCGCATACTTGCAGAATCACCCCAAACTCCAGAAAAACGTCAGGCACACCGCGGGCGAGCTGGACCGGTTGCTGTGGGAGTTGTTCGAAGGAGAAGCGGCGGAGCGCAACAAATTGTTGCTGTAA</cdnaseq>

Protein Sequence

<aaseq>MGAAAGKAAEDVAAASTMTRAEYRLAVAEQVILGWHCARSSGADLAGVWDSDATCTNESLLSAVDEVLLLAEIHAFPMASAARRSMQDALDVAVSCLMEEFLRLKVWDASQMEVRLGVRFAVGKFSMPAADSGVSLSLAFPTTGSISTASTIDELYASGGSQSSRVGAVTMLLDGEFFDELDLISPASLSVLHQIALRVIRAGYTKELLHAFTNAPCDVLDRFLTILQMECAFETDHVSFEDAEWWTAEDMIKRWILATKLVAKALAVMQRQLQAQSCGAFDRFKNDYFMAIAKNSIFVLLRFANGFTTTEAPDKLVYVLEMYEALSNATPGLLLLFTEQRVELVSRQVEVVLAKLARALRAMIGGLIARIRTADCPQTTGSAARGVGVHPLTRYAMTCVELLSPHRAALDLILANGAGESVTSLGSLVAVLVTSLERHLEEINPKLSNDDDDAAAAAAASRHLFLATNASYVARRAVDAGVEPLLGDGWAARRGSLIARYVASYVEACWAPVAACLETAGRKPVKVAAKFSSAFDEAYESQVHREIPDPALRDALRKAASEMVVPAYSAYLQNHPKLQKNVRHTAGELDRLLWELFEGEAAERNKLLL</aaseq>

Gene Sequence

<dnaseqindica>1..665#760..1924#ATGGGCGCCGCGGCAGGGAAGGCAGCGGAAGACGTCGCGGCCGCGTCGACGATGACGCGCGCCGAGTACCGGCTTGCCGTTGCCGAGCAAGTCATACTCGGGTGGCACTGCGCGCGCTCGTCCGGCGCCGACCTCGCCGGCGTATGGGACTCGGACGCGACCTGCACCAACGAGAGCCTCCTCTCCGCGGTCGACGAGGTCCTCCTCCTCGCGGAGATCCACGCGTTCCCCATGGCCTCCGCCGCTCGGCGCAGCATGCAGGATGCCCTCGACGTCGCCGTGTCATGTCTAATGGAAGAATTCCTTCGCCTCAAGGTGTGGGACGCTTCCCAGATGGAAGTCAGGCTCGGCGTTCGCTTCGCCGTCGGGAAGTTCTCGATGCCCGCGGCGGACAGTGGAGTGTCGCTGTCGCTCGCCTTCCCCACCACCGGCAGCATCAGCACGGCGAGCACCATCGACGAGCTGTACGCGTCAGGCGGGAGCCAGTCGAGCAGAGTTGGCGCGGTGACCATGCTCTTGGACGGCGAGTTCTTTGATGAGCTCGATCTGATCAGCCCGGCAAGCTTGTCCGTCCTCCATCAGATCGCTCTCCGGGTGATCCGCGCCGGCTACACGAAAGAACTGCTCCACGCATTCACCAACGCTCCCTGCGATGTTTTAGACAGGTTCGACTTGTCCCAAATCATGCAATTTAAGAATCTACTATCTCCATGGTTGATCTGAGCTGTGTTCTGTCTGTTTTTCTTCGCCATGGAACAGGTTCCTGACGATCCTTCAAATGGAATGCGCTTTCGAAACCGACCATGTCAGTTTCGAGGACGCGGAGTGGTGGACAGCAGAGGACATGATCAAGCGGTGGATCTTGGCAACAAAGCTCGTCGCGAAGGCCCTCGCCGTCATGCAAAGGCAGCTCCAAGCACAGAGCTGCGGAGCGTTCGACAGGTTCAAGAACGATTACTTCATGGCCATCGCGAAGAACAGCATCTTCGTCCTGCTCAGATTCGCGAACGGGTTCACTACCACGGAAGCACCGGACAAGCTCGTGTATGTCCTGGAAATGTACGAGGCACTGAGCAACGCGACTCCGGGACTCCTGCTCCTGTTCACCGAGCAACGCGTTGAGCTCGTCTCCCGGCAGGTCGAGGTTGTTCTCGCCAAGCTGGCGCGCGCGCTGAGAGCCATGATCGGCGGCCTCATCGCCAGGATCCGAACGGCAGATTGTCCCCAGACGACGGGGAGCGCCGCGCGCGGCGTCGGCGTCCATCCGCTGACGCGGTACGCCATGACCTGCGTCGAGCTGCTGTCGCCGCACCGCGCCGCGCTGGACCTGATCCTCGCGAACGGCGCCGGCGAGAGCGTGACCTCGCTGGGAAGCCTAGTGGCGGTGCTCGTCACGAGCCTGGAACGACACCTCGAGGAGATCAACCCCAAGCTGTCCAACGACGACGACGACGCGGCTGCAGCAGCCGCAGCCTCGCGGCACCTCTTCCTGGCCACCAACGCGAGCTACGTGGCGAGACGCGCCGTGGACGCCGGCGTGGAGCCTCTGCTCGGAGACGGGTGGGCCGCGCGGCGCGGGAGCCTGATCGCGCGGTACGTGGCGAGCTACGTCGAGGCGTGTTGGGCCCCGGTTGCGGCTTGCCTGGAAACCGCGGGGAGGAAGCCGGTGAAAGTTGCCGCCAAGTTCAGCTCCGCGTTTGACGAAGCGTACGAGAGTCAGGTGCACCGCGAGATTCCCGATCCCGCGCTGCGCGACGCGCTGCGGAAGGCCGCGTCGGAGATGGTCGTTCCCGCTTACAGCGCATACTTGCAGAATCACCCCAAACTCCAGAAAAACGTCAGGCACACCGCGGGCGAGCTGGACCGGTTGCTGTGGGAGTTGTTCGAAGGAGAAGCGGCGGAGCGCAACAAATTGTTGCTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005006