Difference between revisions of "BGIOSGA005351"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA005351|
Description = Mutant low phytic acid protein 1|
Definition = Oryza sativa Indica Group BGIOSGA005351, complete gene.|
tag = LPA1|
...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA005351| | GeneName = BGIOSGA005351| | ||
Revision as of 18:34, 20 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA005351 |
|---|---|
| Description |
Mutant low phytic acid protein 1 |
| Definition |
Oryza sativa Indica Group BGIOSGA005351, complete gene. |
| LocusTag |
LPA1 |
| Ensembl Transcript ID |
BGIOSGA005351-TA |
| Ensembl Protein ID |
BGIOSGA005351-PA |
| Length |
4317 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:37363313..37367629 |
| Sequence Coding Region |
37367558..37367629,37367312..37367476,37365920..37366203,37365685..37365766,37365013..37365432 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome02:37363313..37367629 source=RiceIndica02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome02:37363313..37367629 source=RiceIndica02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGCCGCCGCAATGCGCCTCCTCAAAACCCCCTTCTCCTCCTCCTCCTCCTCCTCATCCCCACGAGCACGAGGTAGGGGACGACATGGCGGAGGAGGCGCCGCCGCCGCCGCCGCCGCCCAAGCTCCTCTACATTGCCGTCTCCGACGCCGCCGCTCGCCGCGCCTTCCGCTACACGCGCCCCGTGCTTCAGGGCACCCTCCAACTCATGGGATGCAAGGCTCGCCATGCCTTCAAGATTAGCAAGAGGGTGTTCAATGTGATGAGGAGTGAATTCTTGGATGCATCCAAATCAGATACTGCAGATAATGAAGAAAATGCCCCTTCCCTTGTAAAAGATGTTGAGATGCTGAAGCCCAAAATTTTGGAAGCAACTCTTAGTAGCATACCCTTCGAGTTATACAAGACCCAAACAACCATCGTTGTTTCTAGGGAGAAGTTCCTAAGTGTTGTATGTGATGCCCTCTCTTCATACAAGTATGTGGGGCCAAACCAGAAGGCTGACTTTCTTCTTGCTTGCAGAATTAAGGAGAGAAAGGAATCAGTGACAGTACTCTTATGTGGGACTAGCGGATGCGGCAAATCTACGCTATCATCTTTGTTGGGTAGTAGATTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGCCATATGATGAGAGGCTTTACGGATGAGAAGCAAAATCCTCTTCTCTATGCATCAACCTATCATGCAGGCGAATGCTTAGACCCTGTTGCAGTTGCTCAGGCAAAGGCAAAACGGAAGGCACAGAAGCTTGACATTGTTTCTCATCCTAATACCAATGAAGGCAGAGACGACACTTCAGATGATAAAGCTCATCATGGATCCTCCGAATTGCCTCCTAGAACGGAGTTGATCGGCAGCAAGCAAATGGCAATAGAAGGGTTCAAGGCGCAAAGCGAGATGGTAATAGACAGCCTGGACAGATTAATTACGTCCTGGGAGGAGCAGAAACAATCTGTAATTGTTGAGGGAGTTCATCTAAGCCTCAATTTTGTGATGGGGCTAATGAAGAAACACCCTTCCATAATACCATTTATGGTATACATTGCGAATGAGGAGAAACACATGGAGCGATTCGCTGTACGTGCAAAGTACATGACACTAGACCCAGCGAAGAACAGATATATCAAATACATCCGGAACATCAGAGCAATCCAGGACTACCTTTGTAACCGTGCAGACAAGCATCTGGTGCCCAAGATTAACAATACTAATGTTGACCAGAGTGTGGCGGCCATACACGCCACGGTTTTCAGCTGTCTTCGCAGGCGAGAAGCTGGGGAGCAGTTGTATGACCTCAACACAAACACTGTAGCTGTAGTGAATGAGGAATACAGGAACCAGCGTGCTGCTAACTCACTGGGTTCCAAGGGAATGTTTCAGTTGATACAAAGACAGGGATCTTCAAGAAATTTGATGGCTATCCTTAATACTGACGGTAGTGTCACCAAAGCTTGGCATGTGGATAAAAACAATGGCAATGGAAGTCTCGATGGTACAAGCAGTGACAAATCAACAAAAAATCCCATGTATGATACATTTGGGAAGGCGGAGCCAGTCAATCTCCAGTTCGGATCTTTCGGGATCAGTGCATGGATGAGTGACACAGGTGGCACCAGCCATACAGGAAGTGTAGATGACTTGAGAGCTGATGGCATTGAAACGGGCGGCAGATATTATTCCTCATGCTGCAGTTCACCAAAGGTGTCAGATTGCCCTTCAAAAGAGCTTATGGAGGATGATTATTCAGTTTTTGGTAGCGAAGAAGATGCTGATGATCCTCCTGATGCTGGAACTGACGAAGACCTAACTGATGAAGAAAGAGATATGCACGAGATAGAAGCAGGCTCTGTTGATGAACACTCCACCAAGTCCGACGAGGAATACGACGATCTGGCAATGCAGGATGTGATGGAGAACGGTTACTGGTCCGACGACGAACAGGCTGCAAGCAGCACCAAGAACTCATCGAACCAGGAGAAGAACATCCATGGAGCAGCTGATGGTGATGTTGTTGATGATGAAGGCAGTGGCAATGACAGGTTTCACCACAATCTGGCCTTCTTCCTGAAGATGTCCAAGAAAGTAGCCGCCACAGAACTGCCGTGTGCATAG</cdnaseq> |
| Protein Sequence |
<aaseq>MPPQCASSKPPSPPPPPPHPHEHEVGDDMAEEAPPPPPPPKLLYIAVSDAAARRAFRYTRPVLQGTLQLMGCKARHAFKISKRVFNVMRSEFLDASKSDTADNEENAPSLVKDVEMLKPKILEATLSSIPFELYKTQTTIVVSREKFLSVVCDALSSYKYVGPNQKADFLLACRIKERKESVTVLLCGTSGCGKSTLSSLLGSRLGITTVVSTDSIRHMMRGFTDEKQNPLLYASTYHAGECLDPVAVAQAKAKRKAQKLDIVSHPNTNEGRDDTSDDKAHHGSSELPPRTELIGSKQMAIEGFKAQSEMVIDSLDRLITSWEEQKQSVIVEGVHLSLNFVMGLMKKHPSIIPFMVYIANEEKHMERFAVRAKYMTLDPAKNRYIKYIRNIRAIQDYLCNRADKHLVPKINNTNVDQSVAAIHATVFSCLRRREAGEQLYDLNTNTVAVVNEEYRNQRAANSLGSKGMFQLIQRQGSSRNLMAILNTDGSVTKAWHVDKNNGNGSLDGTSSDKSTKNPMYDTFGKAEPVNLQFGSFGISAWMSDTGGTSHTGSVDDLRADGIETGGRYYSSCCSSPKVSDCPSKELMEDDYSVFGSEEDADDPPDAGTDEDLTDEERDMHEIEAGSVDEHSTKSDEEYDDLAMQDVMENGYWSDDEQAASSTKNSSNQEKNIHGAADGDVVDDEGSGNDRFHHNLAFFLKMSKKVAATELPCA</aaseq> |
| Gene Sequence |
<dnaseqindica>1..72#154..318#1427..1710#1864..1945#2198..2617#2715..3446#3717..3824#4039..4317#ATGCCGCCGCAATGCGCCTCCTCAAAACCCCCTTCTCCTCCTCCTCCTCCTCCTCATCCCCACGAGCACGAGGTTTGCCACCGCCGCTGCCGCTTCTTGCCTTGCTTTGATCCGCCGCCGCGGGAGGCCTCTTCTTGATTCTTGATTTTGCAGGTAGGGGACGACATGGCGGAGGAGGCGCCGCCGCCGCCGCCGCCGCCCAAGCTCCTCTACATTGCCGTCTCCGACGCCGCCGCTCGCCGCGCCTTCCGCTACACGCGCCCCGTGCTTCAGGGCACCCTCCAACTCATGGGATGCAAGGCTCGCCATGCCTTCAAGGTATAATACCTATCTATCTTTCTATCTTCTTGTTCATCTTGATCCCAACAATGGAAAAACTGTGCCTGCTCTCTCTCTCTCTCTCTCTCTCTCCCGCTTAATTTCTGCCTAATCTGGCCCCGATCCAACTGGTGGCGATCTGATTGGCTCTCTCGTGATTCTTCCGCTTCGATTCGACTGGAAATTTTGCTGCTTCTCGTATCCAGCGTTGTGTATGGTTTGCACGTGCTGATGTGATAGATCCTTTTGCTCCTTTCTGTGAATTGCTTGCTTGTTCTTGGTTTAATTGATAGAATTGCATGCCGAGTATAGTATCTGGATGTTGTATGTTTTTTTTTTTTTGGGGGGGGGGGGATGGATGATCTTGACAAAGAAAGGTGACGGGTTTTAGTGATTGATGTGCAGATTTGTTCTTAGCTCACATCCAGACTCTCTCAAGTCAGGTCTTTACACACACTGCTGTTGATTTGATCAAACTCTCTCACATCATTTTCGATATCTTTTTGCGCGAGGGCGTTCTTTGCAGGGGAAACCGGAACCTTTGTCAAATTCGAGCACCCAGCGCCTCACTTGGTTCTGATTCCGCGCAATTTTTATGTCCAAAAACCCAGCATATCTTTCAAGATATGTTCTTGTTGCATACTGAACTTGTCCTTTCGGAAATATACTTGTTTGTGACGAGTCATTGTCAGAGATATACTGCCATGCAAACTGTTGCCTAGCTGATGAGAATTACTGTACCTTTCTTGGTATTATTATGTTCTATCGACAAAGACAACACCATGCTGTATGATGTAGACCTGTTTGCCTTGCTTGATCTTTTTGCCTTGGGCCTGTAGTTTGATGGGTTGCCATTCTAGAAAGTATCTAGCAATTGACTTGAGTTGGTCATGGGTTCCCACTCGGTATGCGTTGTTCTTCCCTGACTTGGTCATGGCTGTTTGACATCTTTTTCCTTTCTCTGAAGGCACAATTTGGCTAGCTGCAAAAGAAACTAATTGCTGATGCCTACTTCTGTAGATCAGACTGCACAAAGTGTCCTTTTTTATTTCTCTCTTGACTTGTGAAGATAAGAAGTTTCTTTTTCATCTTTCTTTGGCATCATCAGATTAGCAAGAGGGTGTTCAATGTGATGAGGAGTGAATTCTTGGATGCATCCAAATCAGATACTGCAGATAATGAAGAAAATGCCCCTTCCCTTGTAAAAGATGTTGAGATGCTGAAGCCCAAAATTTTGGAAGCAACTCTTAGTAGCATACCCTTCGAGTTATACAAGACCCAAACAACCATCGTTGTTTCTAGGGAGAAGTTCCTAAGTGTTGTATGTGATGCCCTCTCTTCATACAAGTATGTGGGGCCAAACCAGAAGGCTGACTTTCTTCTTGCTTGCAGGTAACATGTTTTTCCTTGTTTCTGCATTTATAAATTCAGAAGTTACAATGAGTTACCAATCATCAGTTCATTACAGCCAATGGAAAGCTACCTGAATGCATTGAAATAACAATGGTTTTGTGCAACTGTGCATTTTCCAATTGTTCTGTTCAGAATTAAGGAGAGAAAGGAATCAGTGACAGTACTCTTATGTGGGACTAGCGGATGCGGCAAATCTACGCTATCATCTTTGTTGGTATGTTTATCACTTATGCGAACATACAATTCCGGATGAGTGAATGCTCTACTGTACCAGCAACATAGTAGTAGTTTGTTACATGTTAAAGTATAATGCAAAACGTCTGTAGAACAAAATCCACTTGAAAAAAAAAATCCTTTCTAGACCTATCAATTACCTCATTGCTTTCAGAAGATTGTATCGCTTACCGAACAATGAATGATTCTGGGTCTTGATTAATACTTGATATGGTCTGTCTGTTTTTCTCAGGGTAGTAGATTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGCCATATGATGAGAGGCTTTACGGATGAGAAGCAAAATCCTCTTCTCTATGCATCAACCTATCATGCAGGCGAATGCTTAGACCCTGTTGCAGTTGCTCAGGCAAAGGCAAAACGGAAGGCACAGAAGCTTGACATTGTTTCTCATCCTAATACCAATGAAGGCAGAGACGACACTTCAGATGATAAAGCTCATCATGGATCCTCCGAATTGCCTCCTAGAACGGAGTTGATCGGCAGCAAGCAAATGGCAATAGAAGGGTTCAAGGCGCAAAGCGAGATGGTAATAGACAGCCTGGACAGATTAATTACGTCCTGGGAGGAGCAGAAACAATCTGTAATTGTTGAGGGAGTTCATCTAAGCCTCAATTTTGTGGTGCGTTGCGTACTAGTTAGATATTTGCATCAATTACTTATACTTTGTTGCATACTAGAGAACTGATGTAGCCTTTTCTATTTTCATTTTCCAACAGATGGGGCTAATGAAGAAACACCCTTCCATAATACCATTTATGGTATACATTGCGAATGAGGAGAAACACATGGAGCGATTCGCTGTACGTGCAAAGTACATGACACTAGACCCAGCGAAGAACAGATATATCAAATACATCCGGAACATCAGAGCAATCCAGGACTACCTTTGTAACCGTGCAGACAAGCATCTGGTGCCCAAGATTAACAATACTAATGTTGACCAGAGTGTGGCGGCCATACACGCCACGGTTTTCAGCTGTCTTCGCAGGCGAGAAGCTGGGGAGCAGTTGTATGACCTCAACACAAACACTGTAGCTGTAGTGAATGAGGAATACAGGAACCAGCGTGCTGCTAACTCACTGGGTTCCAAGGGAATGTTTCAGTTGATACAAAGACAGGGATCTTCAAGAAATTTGATGGCTATCCTTAATACTGACGGTAGTGTCACCAAAGCTTGGCATGTGGATAAAAACAATGGCAATGGAAGTCTCGATGGTACAAGCAGTGACAAATCAACAAAAAATCCCATGTATGATACATTTGGGAAGGCGGAGCCAGTCAATCTCCAGTTCGGATCTTTCGGGATCAGTGCATGGATGAGTGACACAGGTGGCACCAGCCATACAGGAAGTGTAGATGACTTGAGAGCTGATGGCATTGAAACGGGCGGCAGATATTATTCCTCATGCTGCAGTTCACCAAAGGTGTCAGATTGCCCTTCAAAAGAGGTATGCATTGGTGTGTTTACAGTATGATAGGAGAAACATGCTGCCATCGCAGACATGGATCTATTCAATCCTTACATATGTTTGTTTCATCATTTGCATTTGATATTCCAGCATATAGTGCAAAAATTGGACGAGCTAGCATTAGATGCTCGTCTATATTCGCACGAATGTTTTATTATTAATTACATGTGATACAACACTGCCTTAACACTGGTTTGAGTAGATTGGTGATGCCATAAATTCGACCTAACAAAGACCCTGACTTTTCAGCTTATGGAGGATGATTATTCAGTTTTTGGTAGCGAAGAAGATGCTGATGATCCTCCTGATGCTGGAACTGACGAAGACCTAACTGATGAAGAAAGAGATATGCACGAGGTACCAAAAAAGCTCCCTGTATGATTCAGCAATTTCCTTTCTAGTTGTGATAAACACACAATATAGTTTTCAGAAACTATATAAAAAAGAATGCAAATAGAAAAAAACTATATCCATTGCAGCTGATAATTGTTACTACCATGCTTTCACTTAAATGCTCATGGCTGGATTTGAAGAAGATGCTAAATTCTTTTGCACCAATGAATTCCTGCAGATAGAAGCAGGCTCTGTTGATGAACACTCCACCAAGTCCGACGAGGAATACGACGATCTGGCAATGCAGGATGTGATGGAGAACGGTTACTGGTCCGACGACGAACAGGCTGCAAGCAGCACCAAGAACTCATCGAACCAGGAGAAGAACATCCATGGAGCAGCTGATGGTGATGTTGTTGATGATGAAGGCAGTGGCAATGACAGGTTTCACCACAATCTGGCCTTCTTCCTGAAGATGTCCAAGAAAGTAGCCGCCACAGAACTGCCGTGTGCATAG</dnaseqindica> |
| External Link(s) |
