Difference between revisions of "BGIOSGA005518"
(Created page with "{{IndicaGene|
GeneName = BGIOSGA005518|
Description = 1-aminocyclopropane-1-carboxylate deaminase|
Definition = Oryza sativa Indica Group BGIOSGA005518, complete gene.|
ta...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{IndicaGene| | {{IndicaGene| | ||
GeneName = BGIOSGA005518| | GeneName = BGIOSGA005518| | ||
Revision as of 18:35, 20 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
BGIOSGA005518 |
|---|---|
| Description |
1-aminocyclopropane-1-carboxylate deaminase |
| Definition |
Oryza sativa Indica Group BGIOSGA005518, complete gene. |
| LocusTag |
OJ1611_C08.26 |
| Ensembl Transcript ID |
BGIOSGA005518-TA |
| Ensembl Protein ID |
BGIOSGA005518-PA |
| Length |
3190 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:34755393..34758582 |
| Sequence Coding Region |
34758454..34758582,34758241..34758306,34757853..34758047,34757631..34757741,34757147..34757238 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome02:34755393..34758582 source=RiceIndica02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome02:34755393..34758582 source=RiceIndica02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCCGGAGTTTCCGCCGCCTCCACCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCGGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGATCCAGTCTACAGTGGAAAGGCAGCATATGGAATGCTGAAAGACATGGGTGCTAATCCAGCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACAGGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAACTGGTAAGATGTTCTGA</cdnaseq> |
| Protein Sequence |
<aaseq>MAGVSAASTAGKIGSFLSKRPYAPPSWASHLSPAPSQTFSLGHFPTPIHKWNLPNLPNGTEVWIKRDDISGMQLSGNKVRKLEFLMADAVAQGADCVITVGGIQSNHCRATAVAAKYINLDCYLILRTSKLLVDKDPGLVGNLLVERLVGAHIDLVSKEEYGKIGSVALADLLKKKLLEEGRKPYVIPVGGSNSLGTWGYIEAIREIEHQIQISGDVQFDDIVVACGSGGTIAGLALGSKLSSLKAKVHAFSVCDDPGYFHSYVQDLIDGLHSDLRSHDLVNIENAKGLGYAMNTAEELKFVKDIATATGIVLDPVYSGKAAYGMLKDMGANPAKWEGRKILFVHTGGLLGLYDKVDELSSLSGSWRRMDLEESVPRKDGTGKMF</aaseq> |
| Gene Sequence |
<dnaseqindica>1..129#277..342#536..730#842..952#1345..1436#1983..2072#2204..2261#2330..2443#2687..2784#2986..3190#ATGGCCGGAGTTTCCGCCGCCTCCACCGCCGGGAAGATCGGGAGCTTCCTCTCCAAGAGGCCGTACGCGCCGCCGTCCTGGGCCTCGCACCTGTCCCCCGCCCCCTCGCAGACCTTCTCGCTCGGCCATGTGAGTTTGTTTCCCTAAGTCCACCGCTTGATCGTTGATCCTAACGGCCGCACTTGTTCTTATCGGTGGATTCGATTCGAAGTAGTTTTGAATTGATTAGGAGGATCGATTCCGGGAAACTCACGGTTTAATTTCTAATTGAAACAGTTCCCGACGCCGATCCACAAGTGGAATCTGCCCAATTTGCCGAATGGCACGGAGGTGTGGATCAAGGTTAGAGATAAGCAACAGTTTGCTGTATCAATGAATAGATATGATTCAGCCCCGCAAAAAAAGAAAGAAGAAAAGAATATGATTCAGGGAATATGTTCCATTTACTCTATCAATGAATAGATATATGATTCAGGGTAGAGTAGTTTGTTTATGGAGTTTGGCTTCTGACACGAGAGTTTGGGGGAAATTGCAGCGAGACGACATCTCAGGCATGCAGTTGAGCGGGAACAAGGTCCGGAAGCTCGAGTTCCTGATGGCGGATGCCGTCGCGCAGGGCGCTGACTGCGTTATAACTGTAGGTGGCATCCAGAGCAATCACTGCCGTGCCACCGCAGTGGCTGCAAAGTATATAAATCTTGATTGTTATCTGATACTGCGCACATCCAAGGTGATCTTTGTACTTATGACTTATGAGGTTATTAAATCATTAAATTGATATGATATCGTGTGGTAGCATATTTGGGCTAACCTAGTTTTGGTGGGGCATGTTCACATTCAGCTTCTTGTGGATAAGGACCCTGGTTTGGTTGGGAATCTCCTTGTTGAGAGATTGGTGGGAGCGCATATTGATCTTGTTTCAAAAGAAGAATATGGAAAAATTGGCAGTGTGGTATGCTCTTTTCGATGATGTGCTATTATTGCTTTTATTATTATTTTCATAATTCCATCGGGCCATGTGTAGCAAAGGAACTTTTTATATTTTGGTGTTATACTGATACTTGATATCCATACTCAAGTAGTTATTAAAGGGGCTAAAGGTCCAATCAAGTAATGCGTCCTGCAGTATATGTCTGCATCATACAATTAGCATGGTCATTTTTTCCCTATTCTGAGGAAAGATCATGATTATATTGCCTATTCTTTGAATATGTATGTAGATAAACTGGTAAAGTGGCATTGCCTATTAAAATATCTGAGTGATCTTTTTCTTGTTAGAACTTCTTTATTCATATTGATATTGCTTAAAAGTCCCTAAGCCTAGTATGGATTTATTTGGTTCAGGCTTTAGCGGACTTGCTGAAAAAGAAGCTTTTGGAAGAAGGCCGAAAACCATATGTTATTCCTGTTGGTGGATCAAACTCTCTAGGAACTTGGTATTGTTTTCTGTTCAATCCTAACTATTGAACCATTTTTGCATTTTCAATTTCTTTGTGCGTTTATAGCATACTTTGAATATTCCTCAGGGACTATTATTATTCATGGATTGGTGTTTGCCATCAGTCTAGCAGAAAAGAAGAGATTAGTTTGTATTTGAATAAACATTAGGGCATCACTTTTTTTTGGCAAATTTCTATTGGTCAATATACTATGTTGGACCTGGAATGTTGGAATTGTCTAAGGCCCTAGGCTCTGAATCTAGTGGATCTCATGCAACACTAGAAGATCTGGTTCTATCTTGTGTGGTGGCTAACAAGCGGAGCATAGCTGAAGGACAAATGTAGTGTATTCTATCCACATTTAATCAACAACATTGAATAGAATATAAGATTACTGTAAAGAGAAGGTTTGCACTTCAAAGTTCAAATAGGTCTCAGAATTTGTGAAAGTGATACCCGATTGTTGAAACTTGACCTATCCTTGTAACTTGTATTGTTTCCTTTTTCTTTTTGGAAATCAGAACTTGTTTTGTTTCTTGATAGGGGATATATAGAAGCAATAAGGGAGATTGAACATCAAATTCAGATATCAGGTGATGTTCAGTTTGACGACATTGTTGTTGCATGTGGCAGGTATTTTGTCAATACGCACCATTCTTTACTTTTAAGGGGTACTTATGTACTCACTTGTTATTGCGTCATGCCTAGTTCCTGAAAGTAGCAATTGCTGCTTTATGACTTGAATGATTTTTAAATTTATGCAGCGGTGGAACCATTGCTGGTCTTGCTTTAGGATCAAAATTGAGTAGCTTAAAGGCAAAAGTATGCACTTTCTTTGATTGTTTTCTATCCTGCTGAAATTGTTCGACTAATTATCCATTTTAGGATAGGTCCATGCTTTCTCTGTTTGTGATGATCCTGGATATTTCCATTCCTATGTTCAAGACCTGATTGATGGACTTCATTCTGATTTGCGTTCACATGATTTAGTCAACATTGAAAATGTAAGTACATTTTTAAAGTTCTATATTTGATATTTAAATGGTATTGAAGAGTGGACTTACATCCTCTAATTATGACATTGTTATGCGCGTATCAGTATATAACATAATTGTTCTGAAACTAGTTTATTCATTTCATTGTTCCAATTTTATGGTGCAACTCTAATTGATGATATTTCCTGCTAATGTGCATTGGTAGAATTTTGTGAACATTTGACTTGATTACCTGCAACTGCCGCTTCACAGGCTAAGGGCTTAGGTTATGCCATGAACACAGCTGAGGAGCTTAAGTTTGTTAAAGATATAGCTACAGCAACAGGCATTGTCCTTGATCCAGTCTACAGGTACAATATATTCCTTTTGTTGAAACATTAATCCCAAGAAACACCTTTTGCATGTAACTCTAATTTTACAACCAGTATACTTGCCATTTGTCGAAAAGTATAAAAAGTTTTGTTCTGTTAGACTAATATTGAAGGTCATCACAAGTTCATGATAGACTGGCCATATCATTGCCTAAAGATATATGCTTCATATTTCTGCAGTGGAAAGGCAGCATATGGAATGCTGAAAGACATGGGTGCTAATCCAGCTAAGTGGGAAGGGCGAAAAATTCTTTTTGTACATACAGGTGGTCTTCTTGGTTTGTATGATAAGGTTGATGAGTTATCATCTTTGAGTGGGAGTTGGCGCAGAATGGATCTTGAAGAATCTGTTCCACGCAAAGATGGAACTGGTAAGATGTTCTGA</dnaseqindica> |
| External Link(s) |
