Difference between revisions of "BGIOSGA009169"

From RiceWiki
Jump to: navigation, search
(Created page with "{{IndicaGene| GeneName = BGIOSGA009169| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA009169, complete gene.| tag = OSJNBA0...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA009169|
 
GeneName = BGIOSGA009169|

Revision as of 18:55, 20 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA009169

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009169, complete gene.

LocusTag

OSJNBA0054K20.2

Ensembl Transcript ID

BGIOSGA009169-TA

Ensembl Protein ID

BGIOSGA009169-PA

Length

2103

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35517955..35520057

Sequence Coding Region

35517955..35518875,35518975..35519127,35519707..35520057

Genome Context

<gbrowseImage1> name=IndicaChromosome02:35517955..35520057 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:35517955..35520057 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGACCGGCTCAGCGAGCTACCTGACGACGTCCTGCTCTCCATCCTGAAACGTGTCGACCTACGCGACGCAATAAGAACAGCGATACTCGCTAAACGGTGGAGGCATCTCCCGGCCGCGCTGCCCGATATCGTACTGGACGTCCTCTCCTTCAGAAAGAAGCAGGATGATGATCATCAGGATGGTTTCACTTTCACGTCGAGACTGTCCCGAGAAGCTCGAGCCAACCTCGCCGTGGCGCACGCCGCGAAAGCCATCCTCGCGCGTCGCAGCGGCGAGCACGCCATCGACCGCCTCCTCGTGCGGTTCTACCTGAGGGCGGAGTCCATCGGCATCGTCCGCTCCGTCGACGACGCCATCGCGAGCGGCCGCGCCCGCTTCCGCGAGGCGGCGTTCGACGTGAGGGGCGAGAAGCGCGCCCTCGAGTGCACGGGCAGGGACACGCTTGCGAACGGGAGGCGGCTCGCGTCGCTCGTCGGCGGGTGCCCCCGCGCGTTCGCGGGGCTCACGCGGCTGCGCGTCGAGAGCGTGACGCTGCGCGGGTCCAACGACGTGGCGAACGTGCTCGCCGCCTGCGAGAACCTGGAGATCCTCTCCTTGCACAGCTGCGACGCATCAGCTGGCTCGAACGTGGCGGCGTTGGAGATGGAGCACCCGCGGCTCGTTCGCCTCGACGTTGACGCGTGCGACTTCGAGACCGTAGATCTCAAGTGGCTCCCGAGGCTGGTTCAGGTCTCCAACAACATCTGGTTCCCTTCACGGACTCTACCTCCGCTTGTTTTTGGCCATGTTCCACAGCTCCGGACAGTGATACTCTCCACTGTCGGTACAGTTAACTACAGAACTCTCAAGCTAAGCGAGCTTCTTGTCAATGCCACCGGCATACGTACACTGCAAATGATTTTTGAGAGTGAAAAGATCTGGTTCCAACCTGAAAGCCCGAAACATCTGGCTCCACTTCTCCGCAATCTGAGGATTGCATGTTTGGACAAGATTCACAAGGAATGTGACCTCATTTGGACAATGTTTGTGTTAGAAGCTGCACCCCTCTTAAAGGAGCTTCGCATATCGGTAACAGAGCACTCTTGTGGCGGCTTGGCAGCAGCGGATGTCATGAGGAAGCTACTGTACTGCAAGAAAAACAATATAGAGTGGCACATTGATTCTGATTTCAAGCACTACAATCTGCTGTTGGTCACTGTTGTTGGTTTTGAGATCAAGGATAAATTTGTGAAACTCATAAAACGTCTAGCACACGCGGCTGTCAATTTGGAAGATATACATCTGGAGGATGAAGTCAAATGTGAGAATTGTCAGTATTACCCAACTACGTGGTATCCAAGTACAGACAAAGAGAGAGAGTTAACGAGGAGGCTGATCAACGAGGAAAGATCATCGCCAATAAGAATCAATATAAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MADRLSELPDDVLLSILKRVDLRDAIRTAILAKRWRHLPAALPDIVLDVLSFRKKQDDDHQDGFTFTSRLSREARANLAVAHAAKAILARRSGEHAIDRLLVRFYLRAESIGIVRSVDDAIASGRARFREAAFDVRGEKRALECTGRDTLANGRRLASLVGGCPRAFAGLTRLRVESVTLRGSNDVANVLAACENLEILSLHSCDASAGSNVAALEMEHPRLVRLDVDACDFETVDLKWLPRLVQVSNNIWFPSRTLPPLVFGHVPQLRTVILSTVGTVNYRTLKLSELLVNATGIRTLQMIFESEKIWFQPESPKHLAPLLRNLRIACLDKIHKECDLIWTMFVLEAAPLLKELRISVTEHSCGGLAAADVMRKLLYCKKNNIEWHIDSDFKHYNLLLVTVVGFEIKDKFVKLIKRLAHAAVNLEDIHLEDEVKCENCQYYPTTWYPSTDKERELTRRLINEERSSPIRINIK</aaseq>

Gene Sequence

<dnaseqindica>1..921#1021..1173#1753..2103#ATGGCGGACCGGCTCAGCGAGCTACCTGACGACGTCCTGCTCTCCATCCTGAAACGTGTCGACCTACGCGACGCAATAAGAACAGCGATACTCGCTAAACGGTGGAGGCATCTCCCGGCCGCGCTGCCCGATATCGTACTGGACGTCCTCTCCTTCAGAAAGAAGCAGGATGATGATCATCAGGATGGTTTCACTTTCACGTCGAGACTGTCCCGAGAAGCTCGAGCCAACCTCGCCGTGGCGCACGCCGCGAAAGCCATCCTCGCGCGTCGCAGCGGCGAGCACGCCATCGACCGCCTCCTCGTGCGGTTCTACCTGAGGGCGGAGTCCATCGGCATCGTCCGCTCCGTCGACGACGCCATCGCGAGCGGCCGCGCCCGCTTCCGCGAGGCGGCGTTCGACGTGAGGGGCGAGAAGCGCGCCCTCGAGTGCACGGGCAGGGACACGCTTGCGAACGGGAGGCGGCTCGCGTCGCTCGTCGGCGGGTGCCCCCGCGCGTTCGCGGGGCTCACGCGGCTGCGCGTCGAGAGCGTGACGCTGCGCGGGTCCAACGACGTGGCGAACGTGCTCGCCGCCTGCGAGAACCTGGAGATCCTCTCCTTGCACAGCTGCGACGCATCAGCTGGCTCGAACGTGGCGGCGTTGGAGATGGAGCACCCGCGGCTCGTTCGCCTCGACGTTGACGCGTGCGACTTCGAGACCGTAGATCTCAAGTGGCTCCCGAGGCTGGTTCAGGTCTCCAACAACATCTGGTTCCCTTCACGGACTCTACCTCCGCTTGTTTTTGGCCATGTTCCACAGCTCCGGACAGTGATACTCTCCACTGTCGGTACAGTTAACTACAGAACTCTCAAGCTAAGCGAGCTTCTTGTCAATGCCACCGGCATACGTACACTGCAAATGATTTTTGAGAGTGAAAAGGTATGCATGTAAAAGAATTGGTTGTTCCTCGTACGTGTGTTTCTGTTTCAGGTTTGAAGTGTCACGTTTGTTGATTCGTCCTGACTGATTTTTGTGCAGATCTGGTTCCAACCTGAAAGCCCGAAACATCTGGCTCCACTTCTCCGCAATCTGAGGATTGCATGTTTGGACAAGATTCACAAGGAATGTGACCTCATTTGGACAATGTTTGTGTTAGAAGCTGCACCCCTCTTAAAGGAGCTTCGCATATCGGTAATTGCTACTCTCTCTATTTCAAAATATAAGTATTTTTAGATTCTAACCCGGTCTCCGAGATGCTAATTTGACCAATAATATATATAAAAATAAGGGCTTGTTCACTTTGATGCCATAAAAAAAACTTACCAAATTTTAGCATTGCCAAAATTTTGGCATAGTTACCAAAATTTTGGCAAGATTTCTTATATAGTTACCAAAATTTGGCAGCAAACTAAATGTTACCACTTTTTTTTGGGTAACTTTACTAAAATTTGGTAAGGTTGAAAATGGTATCAAAATGAACAGGCCCTAAGATGTTTTAAATAAAAATAGTTGTATATTATAATAGTTTGTTTAATGATACATCTAGTAGCATCAATTTTACATGATTGATTTATTATTATTATTATTATTATTATTTCTATTAATAATAAAAGTTAAAAATGTTTGGCTTGTCACTATTCTAAAAAAATGCTTATATTTTTGGACAGAAGGAATAATATATTTATATGTATTATCAATTAAACATGTGTCGTCTCTAAAACTTACGGGCATGCTCAACTAAAGCAATTTGTCGTCGTGCGTCGCGTACAGGTAACAGAGCACTCTTGTGGCGGCTTGGCAGCAGCGGATGTCATGAGGAAGCTACTGTACTGCAAGAAAAACAATATAGAGTGGCACATTGATTCTGATTTCAAGCACTACAATCTGCTGTTGGTCACTGTTGTTGGTTTTGAGATCAAGGATAAATTTGTGAAACTCATAAAACGTCTAGCACACGCGGCTGTCAATTTGGAAGATATACATCTGGAGGATGAAGTCAAATGTGAGAATTGTCAGTATTACCCAACTACGTGGTATCCAAGTACAGACAAAGAGAGAGAGTTAACGAGGAGGCTGATCAACGAGGAAAGATCATCGCCAATAAGAATCAATATAAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009169