Difference between revisions of "BGIOSGA009820"

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(Created page with "{{IndicaGene| GeneName = BGIOSGA009820| Description = Wd repeat protein 4| Definition = Oryza sativa Indica Group BGIOSGA009820, complete gene.| tag = OJ1124_H03.17| tid ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{IndicaGene|
 
{{IndicaGene|
 
GeneName = BGIOSGA009820|
 
GeneName = BGIOSGA009820|

Revision as of 15:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA009820

Description

Wd repeat protein 4

Definition

Oryza sativa Indica Group BGIOSGA009820, complete gene.

LocusTag

OJ1124_H03.17

Ensembl Transcript ID

BGIOSGA009820-TA

Ensembl Protein ID

BGIOSGA009820-PA

Length

3016

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:34908614..34911629

Sequence Coding Region

34911493..34911629,34910971..34911135,34910517..34910697,34910334..34910390,34910171..34910241
,34909924..34909999,34909777..34909836,34909551..34909654,34909408..34909468
,34908614..34909009

Genome Context

<gbrowseImage1> name=IndicaChromosome03:34908614..34911629 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:34908614..34911629 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGACGCCGCGGTCGAGGAGGCCGAGGTGAGCGGCGGCGCGGCGGAGTTCGCGCCGGCTCTCGTCGCCGCCCACCCGCTCGGCCGCTCCGTCGCCGTCGCCGTCGGGCCCGAGCTCCGCGTGTTCGATCTCAAGGCCAGCAGTGCAGTTTCATTGTCAGACAATTCTGGCGGTGGTTCTCATTCGGATGCTATAAGAGCTATCTCGTTTAGTGCAAACGGTGCTCTGTTCGCATCCGCTGGTGATGACAAGCTTGTTAAGGTCTGGAAGACTGATTCATGGTGCTGCATTCGGACCATAACTTCTGAAAAGAGGGTCAGTGCAGTTGCTATTAGCAATGATGGCACATATGTAACTTTTGCAGATAAATTTGGTGTTATTTGGTTAGTTACCATGGGGGAAAGTGGTGGAGAGCAGGAGCCAACTGATAATAAACCTGTGTCAATTTTTGGTCACTACTGCAGTATTATTACTAGCATGAAATTCTCACCGGATGGACGATTCATTGCTACAGCTGACCGGGACTTTAAAATCCGAATTACATCACTCCCGAAAAAGCCTTTAAGAGGGGCTCATGAGATTCAAAGTTTTTGCCTAGGACATACAGACTTTGTATCGTGCATTGCCTTCACATGCCTTTCAGAAGGTCCGAGCTTTCTTTTGTCTGGAGGCGGTGATTCTACTGTTCGTCTATGGGACTACATAAACGGCTGCCTCCTTGATACATGTCAAGTCCGAGACAAGGTGGGAGAACTCTTAGAGCCAAATGAAACTGAAGACAACAATCTATCTGTTGCAGATATATGCCCGACTAATGATGGTTCGTTGGTTGCTGTAGCCATTCAGAGTTTAAATGGAGTAATGCTTTTAGCATGTGACCTTATTGCAAAGAAGTTATCTTTTCTAAAGGTGGTTACAACGGAAAAGTGCTATATTCCTACTAGCCTGTCTTCCAGCTTCTCAGCAGATCTTCTATGGACCGTCATGGGCGCATCGAATATGCCTAATCAGGCTACTTCCCAGTTATGTACCCGTTTGAAAATCATCCCACACTTCAAAAAGGATCCGCTAGCCGGATGTGATCATGTTCCTACAGTCTTGGAAGACAGTGAGGTGCCACATGGTGAGAAGCTCCTTCTGGCGCTGCAAGGAAGTCTTGACATTGCAAAGCAAGAAGAGGTGTTAGCTTCAGTTCTAGCTGCACTGAAAGTATCAATGCACAAGATGCTGGTAAAGAAGCACTACTCGGAGGAAAGGAGAGAGCAGAGGAAAAGGGGCAGAAACGATAAGAAGATCAAGAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MEDAAVEEAEVSGGAAEFAPALVAAHPLGRSVAVAVGPELRVFDLKASSAVSLSDNSGGGSHSDAIRAISFSANGALFASAGDDKLVKVWKTDSWCCIRTITSEKRVSAVAISNDGTYVTFADKFGVIWLVTMGESGGEQEPTDNKPVSIFGHYCSIITSMKFSPDGRFIATADRDFKIRITSLPKKPLRGAHEIQSFCLGHTDFVSCIAFTCLSEGPSFLLSGGGDSTVRLWDYINGCLLDTCQVRDKVGELLEPNETEDNNLSVADICPTNDGSLVAVAIQSLNGVMLLACDLIAKKLSFLKVVTTEKCYIPTSLSSSFSADLLWTVMGASNMPNQATSQLCTRLKIIPHFKKDPLAGCDHVPTVLEDSEVPHGEKLLLALQGSLDIAKQEEVLASVLAALKVSMHKMLVKKHYSEERREQRKRGRNDKKIKK</aaseq>

Gene Sequence

<dnaseqindica>1..137#495..659#933..1113#1240..1296#1389..1459#1631..1706#1794..1853#1976..2079#2162..2222#2621..3016#ATGGAGGACGCCGCGGTCGAGGAGGCCGAGGTGAGCGGCGGCGCGGCGGAGTTCGCGCCGGCTCTCGTCGCCGCCCACCCGCTCGGCCGCTCCGTCGCCGTCGCCGTCGGGCCCGAGCTCCGCGTGTTCGATCTCAAGTAAGGAACGCCTCTCTTCGCTCGTGGCTCGCCTTCCTGCCTATTGTCGGATCTCAATTTACTCTTATAGTTAAGTAGTTTGATTTTGATGGAGATTGGGACGTGATGCGTTTTTTTACCTGAGCCTAAATTGGTCTGTCGTATTGTACTGTAGTCTAAGTGCATAGCATATAGAAGGATGAAGCTTCTGTTGATATTTATTCGTGTAAAATTTCACTGCTGATAAAATTTTCAGCTCAGATGCTTAGTTTTGTACTGCCCAGTGAAAATGTCTAAATGGATGTATGCCTTATTTTTTCCTTCATTTCACTTGGTGAATATTGAAATGTGCGAATAAATGTGTATTTTTGGATCCAGGGCCAGCAGTGCAGTTTCATTGTCAGACAATTCTGGCGGTGGTTCTCATTCGGATGCTATAAGAGCTATCTCGTTTAGTGCAAACGGTGCTCTGTTCGCATCCGCTGGTGATGACAAGCTTGTTAAGGTCTGGAAGACTGATTCATGGTGCTGCATTCGGACCATGTAAGTCACCCTGTTTGTTTTATTGTGAAAGCATAATGGATTAACCAAATTAGTGTACCATTTTATTTATCATGTATTCAGTGAGTCAATCTACAACTATTCTTCTGCTACTTATCTACGTGTTTATGAGAATCCACACATAATTGTTGGCTGACACACTTAGCAGCTTGGAGTATTGTTAGTTATGTTAAAAACTTCATTTTTGTGGTTGGTAATGTATTAAGTCCTTCATGCATGAGTTTGATTTCTTTTGCAATGTCTTTACTTTTGCAGAACTTCTGAAAAGAGGGTCAGTGCAGTTGCTATTAGCAATGATGGCACATATGTAACTTTTGCAGATAAATTTGGTGTTATTTGGTTAGTTACCATGGGGGAAAGTGGTGGAGAGCAGGAGCCAACTGATAATAAACCTGTGTCAATTTTTGGTCACTACTGCAGTATTATTACTAGCATGGTATGACAAATTTTGATATTTTATATTAGCCATAGTTATTTGTATGTCCTGCTGAAAATATCAAAGTAACACATTATGCTTCAAATTTCCGATCCCTGCACACTTATATTATGTATTGGAATGCAGAAATTCTCACCGGATGGACGATTCATTGCTACAGCTGACCGGGACTTTAAAATCCGAGTATGAAACCATTATACTTTGCTGTACTTTCTGCATTTGTGTGGATCATAATTCTCTTTTTTTTTTCTTCTTTGGTGAAATTTGTTTTGTAGATTACATCACTCCCGAAAAAGCCTTTAAGAGGGGCTCATGAGATTCAAAGTTTTTGCCTAGGACATACAGAGTATGCTCAGTATCCTGTGCCTTCGTACTTTTTTATTTTACACAGTGTCTACATTCTTTCTGTATCTCTAGGAATTTGCATTATTATCTATTAAACCCAGTGAAATTTTAGAGCTAAATGTTGCAACGTATTAGTTAATGCATTTTATATTTCCTGTGGATAATAATGCAGCTTTGTATCGTGCATTGCCTTCACATGCCTTTCAGAAGGTCCGAGCTTTCTTTTGTCTGGAGGCGGTGATTCTACTGTGGGTACAAAATCATTTTGGAATGCTAACGTGTTCCCAGCAAGCTTTTCCAATGCTCCTCGTGATGTTTTTCATTCATTTATTTAGGTTCGTCTATGGGACTACATAAACGGCTGCCTCCTTGATACATGTCAAGTCCGAGACAAGGTAACATCTGGAAAATGTTTATTTGAGTTTTCTAAAAAAAAAAAGTCAATAGGTTGTTTATTCCAGTTATAATTGTTTGTGTTATTTTGTACTAGCTAACTTGCTCTTAAAACAATTCACAGGTGGGAGAACTCTTAGAGCCAAATGAAACTGAAGACAACAATCTATCTGTTGCAGATATATGCCCGACTAATGATGGTTCGTTGGTTGCTGTAGCCATTCAGAGGTAAACTTGTGTGGTTACGCTTCTCCAAAAGTAATATGATTTGCTTGGTAAAATGGGGTTCTTTTTTATCTGTTTGATGCAGTTTAAATGGAGTAATGCTTTTAGCATGTGACCTTATTGCAAAGAAGTTATCTTTTCTAAAGGTATGTCTCTTTGAAAATGTATCTTTTCAAGGCAACTGGTTTGGGATTAATAGCATGACCACTTGACCAGGATTTTGTTTTACAACAAGATTTAGCGCATCATTACTATTTAGTACTGTTGATAGCCTTATTTCTTGAAATGATCTTTACAAAGATTGGTACCAATGCTTGTGACTTGCTAGGCTTTGGCTTGAGAGAAATGTTCGTGCGAGCTCTAGGTTTCTTGTTGCCAGTTGTGATGGGGCTAGTTAAGATTTATCTGGAAAAGTATTGTTAAATCTTGGTTATTGGTGACTAGCAAGATATCTTGTTGGCTCAGCTGTTCAATAGTAGTACCTTTTTTTTTCTTTTTTTGTATATTGCTGGAAAAACTAATAATTCCTCCCCTGCACTACCAGGTGGTTACAACGGAAAAGTGCTATATTCCTACTAGCCTGTCTTCCAGCTTCTCAGCAGATCTTCTATGGACCGTCATGGGCGCATCGAATATGCCTAATCAGGCTACTTCCCAGTTATGTACCCGTTTGAAAATCATCCCACACTTCAAAAAGGATCCGCTAGCCGGATGTGATCATGTTCCTACAGTCTTGGAAGACAGTGAGGTGCCACATGGTGAGAAGCTCCTTCTGGCGCTGCAAGGAAGTCTTGACATTGCAAAGCAAGAAGAGGTGTTAGCTTCAGTTCTAGCTGCACTGAAAGTATCAATGCACAAGATGCTGGTAAAGAAGCACTACTCGGAGGAAAGGAGAGAGCAGAGGAAAAGGGGCAGAAACGATAAGAAGATCAAGAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009820