Os07g0688300

From RiceWiki
Revision as of 20:42, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0688300

Description

Similar to Importin alpha 1

Version

NM_001067236.1 GI:115474204 GeneID:4344355

Length

4133 bp

Definition

Oryza sativa Japonica Group Os07g0688300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:29907997..29912129

Sequence Coding Region

29908774..29909164,29909289..29909416,29909547..29909675,29910071..29910149,29910245..29910408
,29910491..29910673,29910758..29910883,29910974..29911065,29911149..29911245

Expression

GEO Profiles:Os07g0688300

Genome Context

<gbrowseImage1> name=NC_008400:29907997..29912129 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:29907997..29912129 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cttgaaggcctatcagaaatggtggagaaggtctggtcagatgataccactagtcagttagaagccacgatccaattcaggagactcctttcagatgagaagaacccaaccgtgataaaaatcatcagagcagatgtcctgccaaggttttctgatttcctctcaagacatgagcatcctcagctacaaatggaggcggcatgggttcttaccaacatagctgcatctgactatacattgctagttgcagaatgtggtgctgttccaaggttggtcgagctcttagaatctgcaaatgctaatatcaggcatcaggctatctgggctcttggaaatatagctgcagacgtgcctacctgcagagagatcgtccttgatcatggtgctgtgacaccattacttgcccaatttagagaaggcatgaaagttccagttctgaggactgccacttgggcgttgtcaaacctttgttttggaaaattaccagctgaagtgcaagtgaagccaatactggatataatcagccagcttattcattcagtcgacgaaaagatactgggtgatgcatgctgggctctttgttatatatgtgacggtgtatctgacggaattcaacatgtgctagatgcgggtgcttgccctcaacttgtaaatcttttgatgcatgcatcagctaatatcctgcttcctgtcattacggtacttgcgagaatctcttctggagatgatgctcaagtgcaggtcctagtagaaaatgacattcttaattatttggccccgttgctagcacgaaattacccaaagagcatcaagaagcaagcttgtctaattgtttctaatatctccactggcagcaaggataatattcaggcagtaattgatgcagatgttataagccctctcattttcctattaaagacctccgagaaggatatcaaggaggaagctgcttgggctatatcaaatgctgcgtctggtggttcaaatgatcaaattcaatatttggtgagtcgaggatgtttggagccactctgcaatgttctcacttaccaagatgctgacctagtatatgcgtgcctggaaggtcttcaaaacatacttcaggcgggtgcagtggggaagcaggggcagggttccacggtgaacccgtatgcacagtttattttagaatgtgggggtttggataaactggaagatctgcaggaagtcgacaatgatgccatttacaagttagtcatgaagttgctggagggttactgggacgaggaagtaagtgatgatgacccaaatttaccaacttcaaatgactctgcagagaccgtggagacggcatctgaagatgctgcgcagccaacagagccatcggccagcccaaatgaaagcgaatga</cdnaseq>

Protein Sequence

<aaseq>LEGLSEMVEKVWSDDTTSQLEATIQFRRLLSDEKNPTVIKIIRA DVLPRFSDFLSRHEHPQLQMEAAWVLTNIAASDYTLLVAECGAVPRLVELLESANANI RHQAIWALGNIAADVPTCREIVLDHGAVTPLLAQFREGMKVPVLRTATWALSNLCFGK LPAEVQVKPILDIISQLIHSVDEKILGDACWALCYICDGVSDGIQHVLDAGACPQLVN LLMHASANILLPVITVLARISSGDDAQVQVLVENDILNYLAPLLARNYPKSIKKQACL IVSNISTGSKDNIQAVIDADVISPLIFLLKTSEKDIKEEAAWAISNAASGGSNDQIQY LVSRGCLEPLCNVLTYQDADLVYACLEGLQNILQAGAVGKQGQGSTVNPYAQFILECG GLDKLEDLQEVDNDAIYKLVMKLLEGYWDEEVSDDDPNLPTSNDSAETVETASEDAAQ PTEPSASPNESE</aaseq>

Gene Sequence

<dnaseqindica>2966..3356#2714..2841#2455..2583#1981..2059#1722..1885#1457..1639#1247..1372#1065..1156#885..981#gggttgaccagccaggcaggctcgactcaagcccgaccccgccggccgccgcaatgccgcgagccccacctccgcggccgtcggaggacgcgcgcctcgccgcctacaagcccggcgtcgacgtcgcccgctcgcgccgccgccgcgaggaccgcctcctcgccgtccgccgcagcaaccgcgatgccggcctcttcaagcgccgccgagacgaacccactcccactcccatcccgcccgcgagggccgcgaccccctcatctcaggccgatgatgtgcccaccaccaccaccgccacctctcccccttcctctgcaccctcttcgcccccgtcctcacctcccgccgaatccgttcctccgactgccgccgactctgaggtgcgtgcttactctagggttttaactctactttcggagtatctgactgttctcgcttctggcacatatactagagctagtcaaatttctcattctatgtaaagaaacctgcaatttcccaccgtatgtttgagttctggtcatgtattgtaggcaatctgcaaaacgaaattcaaggaaaaaggcctctcactctcactagtcactgctgtcattggctgaatacactcactagaagtagatagatgtaggctaagtttgtatactgctgcgttatttgaaacataaataacccatgtcgcgttcctcttatggtgtgcgaaactgcaattgcattccaattgtttaccacgatactttggtttgtgaagtctaaagaaaagctttggtttgtgacattgctaggacaatgaaatgcttccattggtttcacaaactcattgtgaagtgctcttcttccgtttcctttcaaattccctcattctgtcttttctatccagctagcttgaaggcctatcagaaatggtggagaaggtctggtcagatgataccactagtcagttagaagccacgatccaattcaggagactcctttcagatggtatttcacatgtttaatatgcgatattgttttgctctttttattcattaatatcccccttatcatcattgttctctctgtagagaagaacccaaccgtgataaaaatcatcagagcagatgtcctgccaaggttttctgatttcctctcaagacatgagcatcctcagctacaagtatgtttagtctatttttctcttcttctgtctcccctttccggattttccatttgtaaatgttcttattctgcatgtactgttttgcagatggaggcggcatgggttcttaccaacatagctgcatctgactatacattgctagttgcagaatgtggtgctgttccaaggttggtcgagctcttagaatctgcaaatgctaatatcaggcatcaggtaaagattggtactctatgctacttgtttttgtaatggtttggttactgatattgttggttctggcttcttatgagttaaaaggctatctgggctcttggaaatatagctgcagacgtgcctacctgcagagagatcgtccttgatcatggtgctgtgacaccattacttgcccaatttagagaaggcatgaaagttccagttctgaggactgccacttgggcgttgtcaaacctttgttttggaaaattaccagctgaagtgcaagtaggttgctgaatgactactgcgtgtgtagtattaaatttaaaaggaatataatttgagctgtcattgctgattgttgcaggtgaagccaatactggatataatcagccagcttattcattcagtcgacgaaaagatactgggtgatgcatgctgggctctttgttatatatgtgacggtgtatctgacggaattcaacatgtgctagatgcgggtgcttgccctcaacttgtaaatcttttgatgtaagtttctgggttctctttgtactacagttttgcgtatggaaaacttccaaatattctttgttacaacactttaacttgtttcatgattttaggcatgcatcagctaatatcctgcttcctgtcattacggtacttgcgagaatctcttctggagatgatgctcaagtgcaggttgtttactcatcatattgtttttacctgtcgctgttctttgttttaccactatggattagcaatgatgtgcaacaattagactagaagacatatgtggagtggctggaagtttgcagtaaagctcggaatctttttatgacctgaaactcatattgtggtcaccttgtgccatcgtgtgttctctttgttcatatgtgtattcctccatcatagaaatgccaatgtatactattatcttccaggatagtatacattgtagaaatgacaatgtaaatatactttgtatacttctgtacttgttctaatacttgactgatagttcttatattctgctatgtttttctccttatcttctggaattaatgttgagcctacgaggcaattttttgcaggtcctagtagaaaatgacattcttaattatttggccccgttgctagcacgaaattacccaaagagcatcaagaagcaagcttgtctaattgtttctaatatctccactggcagcaaggataatattcaggtagaagtgttttctgacttttgtgctttctcagcaaggataatgtccatgtctatttttgctgcatcatcttccatgccctacattaagtgattgtactactatgttttgaccataattcttccaacaggcagtaattgatgcagatgttataagccctctcattttcctattaaagacctccgagaaggatatcaaggaggaagctgcttgggctatatcaaatgctgcgtctggtggttcaaatgatcaaattcagtaagttctagccaggaattgtcttggtattcttttacattcaaatgtatgtttaatgtattttttttgtgtcaatgaaattgaacctggtgctctgcaatgattattctctatttggccacagatatttggtgagtcgaggatgtttggagccactctgcaatgttctcacttaccaagatgctgacctagtatatgcgtgcctggaaggtcttcaaaacatacttcaggcgggtgcagtggggaagcaggggcagggttccacggtgaacccgtatgcacagtttattttagaatgtgggggtttggataaactggaagatctgcaggaagtcgacaatgatgccatttacaagttagtcatgaagttgctggagggttactgggacgaggaagtaagtgatgatgacccaaatttaccaacttcaaatgactctgcagagaccgtggagacggcatctgaagatgctgcgcagccaacagagccatcggccagcccaaatgaaagcgaatgacttgtaatgcttccttcctgtaagatgtaaccatctggttcgttggtgtcatgccaaaccgtcactctgccgaatttataacattactacaatttatgtattatatactaatgaaatttttgtgaatgtttgagcaggaatttgatcttaatttcccttgtccggtgaaaagagaatgaaggcatgactgttttttggggcaagattttctcgctgtaaacagtgtgagactaaacagtggatgaaaagacctgagatactctcatctctactactaccaagagtccaagaccaacacaaccatatcagggtactgtacttacctgcacaattgtcgtcagcagaggctagtggcacaatctagttttggttcgtgttgcatgcatcatggcaagttgccaacctcatggctaagcaagatatgatcaacttatgacttgttaggagcgatacgtttcgctcaaaaaccatcaattccgttcatacactacgtgttggcttccatcaatcgctatccaagatatctgagtttgtacgaccgtaatcagtaaacctgcatctctctcgatccaagtcaattgaagcgatcgaagtcaattgaagcaaatatagtaggcacacaaaaatatacagcctcaatcatgtttgtttaatttaccgacgtggtcgatattaatgtatgtaaattctaagtgtgtatctgaattttttaagtgtcaccttcaacaacactgggttgatggaagctaaccaaaccgaaagctaagctcgtcgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0688300, RefSeq:Os07g0688300