Os06g0142700

From RiceWiki
Revision as of 20:17, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0142700

Description

Cytochrome c oxidase, subunit Vb family protein

Version

NM_001063306.1 GI:115466343 GeneID:4340088

Length

2917 bp

Definition

Oryza sativa Japonica Group Os06g0142700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:2242777..2245693

Sequence Coding Region

2243126..2243194,2243330..2243409,2243563..2243629,2245185..2245235,2245326..2245411
,2245510..2245621

Expression

GEO Profiles:Os06g0142700

Genome Context

<gbrowseImage1> name=NC_008399:2242777..2245693 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:2242777..2245693 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtggaagcgcgcgacctccgtcctcctccaccaccgctccgccctcacccgccgctccccggcgatcggcggcggcgtccttccccgtgctctcttcttctccacgctcgatgcggcgcaggcgaggacgagggtggaggacgtgatgccgatcgccaccgggctcgagcgcgaggagatcgccgccgagctccaggggaagaagaggtttgatatggacgcgcccgtcgggccctttggtaccaaggaagctccagctgttattcagtcatactacaacaaaaggattgttggttgtcccggtggtgaaggagaggacgagcatgatgtcgtgtggttttggttggagaaaggcaagccacatgaatgccctgtctgcactcagtatttctcgcttgaggtgataggagaaggaggagatcctgatgggcatgacgatgacgacgatcaccaccatcattaa</cdnaseq>

Protein Sequence

<aaseq>MWKRATSVLLHHRSALTRRSPAIGGGVLPRALFFSTLDAAQART RVEDVMPIATGLEREEIAAELQGKKRFDMDAPVGPFGTKEAPAVIQSYYNKRIVGCPG GEGEDEHDVVWFWLEKGKPHECPVCTQYFSLEVIGEGGDPDGHDDDDDHHHH</aaseq>

Gene Sequence

<dnaseqindica>2500..2568#2285..2364#2065..2131#459..509#283..368#73..184#ctttttcctcctcctaaccaccgctccggcctctccatctcccgccgctcgccgtcgccgccgccgcccgccatgtggaagcgcgcgacctccgtcctcctccaccaccgctccgccctcacccgccgctccccggcgatcggcggcggcgtccttccccgtgctctcttcttctccacgctcggtaacattccctcccgaactccggcccgatcccggcaggtggtgaggcggcgatttgacggggcggtctgtctgtctgtctgtctctgtcccgcgcagatgcggcgcaggcgaggacgagggtggaggacgtgatgccgatcgccaccgggctcgagcgcgaggagatcgccgccgagctccaggtcaaccacctctcctcttgatattgatttattagtggaagtttttttttttttactagatggaaggtctgaatttttttttcatttcaggggaagaagaggtttgatatggacgcgcccgtcgggccctttggtaccaaggtgagatgagaggctgagagctttccatttcacatcaattccatggatgttttgacccgtgtatttgagagctattgaattgattggttagatggagtgtgtgattgctgactgaattaatgctgatgtgtagtgcttaagacttgtggccatggatgcaacgctctcttaatagcttgacatgttcccctctgatattaggtgataagcttctttggctcaacggaatcggcgaagagataggtgttagtttctgatgttgcagatgcagcagctgggtcacggcagggattttgttcactgaatatgaatatgtgagattgtagcattggttcagctaccagttcttttccctacataggaaagatttttatgcacaaacattaggcaaaagttcaacacacatacgtttaataaagtcattacaacataggtaattctgtttatgtttacactgatctgtgatttgtatttttgtgggctggtcattggcaaccgaagtttttgccttgctgtatggtgtgtgcattccagcttatgttatttgctatgtgttggcttttcgtatggtcacatcttttgctattctgtacatcttatgtgttgacttttcgtatagtcctgttgataggaaaaacttgcataaatagctgttttgttcacttgtcagatgtgcttgcttaagaaaggttgggctgtgttgcctgactcctgttgtgttaacaaagaggattttgtttgtctttgttttcattataactttagtagagcattttttttcagcatgttaaaataattttggggattttgtaggctataacattctgaatttccatgcataattatgggggcctgtcttatatctagtacttggaggcatcttgattttgcttttctttagagaattgttgattagcaatttcatgttaagactttcctttacatgctcatagaaatatattttcacttggaaaaccctgctactatatcttgtgagtttattctctgattctgtccatgtggatccggctaatatggaggtttctagttgaaccagcaatgttggaccttttagttattggttgctcaataatagtacatttgatcatgaagttgaatttgcaatttctatgttgtctatctccaggaaataaaataagtgcagtgttttgaaaattcttcgctttcccatatatctctagtctctaaggcagattgccccctagttgtggtgatcgatacatgtacggatgttatacaatttatttatttattcagtggtttcttttgttttatcacccctattttcctacaaattgtttttctcatgacatttcccctcagacttgcattaggtgtgatctgataaggttatcagcacattaatgggcatcattttcattctgttttggcctgttgatgaatggtactactctttagcgtgttgcatctaaccttgatttggtccctttgtaccttttgtgtcactgttcagtttagttcattccactcctgcgtgatcgaactggactaatattttttccatgttgtataggaagctccagctgttattcagtcatactacaacaaaaggattgttggttgtcccggtggtgaaggaggtatagtacctgtgcatgctaatttccttgtttttgacctataaagaagcttctaggatgaaatcttctcctgcatcttctctataaatattcatcgactaaccaccaatggaattaacttaaactgcaaattgcaatgattgatattttcagaggacgagcatgatgtcgtgtggttttggttggagaaaggcaagccacatgaatgccctgtctgcactcagtatttctcggtatgttggtactttctgttgacaaaatcgcttgccttgtgagagcaatttctgcatgagccactaaatcgcgcatatgttggtatgttgtcctgatgttcgctgagctatcaacttgcaactttatgttcacagcttgaggtgataggagaaggaggagatcctgatgggcatgacgatgacgacgatcaccaccatcattaaggttgcagaagtcacctctagcaataaaaacactggatatggccatatccatgtcaactctcaattcagatgacttggagcagcagtggattttggaaaaacaaagtttgtctttttagagatttgttcatgcaaataacaggattcagtaaacaatgatatgcaattctctttttcagcacaccttagtcgaattcaaaataggtatgtttgtttgtttgtcttgatggatgattccatgttcaatggccacctggaccatttattttggtgtatgatctgttatctgaacatttcacaaaccttggtcctgttcaattcagtttaaacaaatgaagtcagcattctg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0142700, RefSeq:Os06g0142700