Os06g0144200
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os06g0144200 |
|---|---|
| Description |
Similar to Pectate lyase homolog (EC 4.2.2.2) |
| Version |
NM_001063316.1 GI:115466363 GeneID:4340099 |
| Length |
1755 bp |
| Definition |
Oryza sativa Japonica Group Os06g0144200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:2335435..2337189 |
| Sequence Coding Region |
2335586..2335940,2336039..2337036 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:2335435..2337189 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:2335435..2337189 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggatatatatacgacatcacatcacagcacaataatggcagcctcctccgtcacggggagccgccgcctctgcattctcttctacctcctcactgtcgtcgccaccgtggtcaccgcggcgtcggcgcacacggcgcacaacgccaccgccgacgaggagtactgggagaagcgcgccgaggaggcccgctcgttcaaccgcgccgcctacgtgagcgaccccgtcgccaccctgaaccgcttcaacgccgacgtgctccgcgccaccacgcgccgctcgctggccaggtacaccggcccgtgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgaccggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgctggcaagatctacgtggtgaccgacgccagcgacgacgagatggtcatcccgaggaaagggacgctccggtacggcgtgatccaggaccggccgatgtggatcgtgttcgcgcgcgacatgatcatccagctccggcaggagctgatcgtgaaccacaacaagaccatcgacggccgtggcgcgcaggtgcacatcaccggcgcccagatcacgctccagggcgtccagcatgtgatcatccacaacgtccacatccaccactcggtgccgcacggcggcggcatgatccgcgactccaagcgccactacggcctccgcacgcgcagcgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccatgtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctccaacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagcaacagcgacgcccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggcaagggccttgtgccgcgctgcaggttcggattcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaacatgaacccgacgatcatcagccaggggaacaggttcatcgcgcccgacgacttgaacgccaaggaggtgaccaagagggagtacacgccgtacgacgagtacaaggagtgggtgtggaagtcgcagggcgacgtgatgatgaacggcgccttctttaacgagtccggcggccagaacgagcgcagctacgaccagctcgacttcatccctgccaagcacggcaagtacgtcggccagctcaccaagttcgccggcacgctcaactgccacgtcggcatgccatgctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MDIYTTSHHSTIMAASSVTGSRRLCILFYLLTVVATVVTAASAH TAHNATADEEYWEKRAEEARSFNRAAYVSDPVATLNRFNADVLRATTRRSLARYTGPC MATNPIDRCWRCRDDWATDRKRLARCVRGFGHRTVGGAAGKIYVVTDASDDEMVIPRK GTLRYGVIQDRPMWIVFARDMIIQLRQELIVNHNKTIDGRGAQVHITGAQITLQGVQH VIIHNVHIHHSVPHGGGMIRDSKRHYGLRTRSDGDGISIMSSSNIWIDHVSMSNCSDG LIDAVSGSTAITISNGHFTKHDHVMLFGASNSDAQDEVMQITVAFNHFGKGLVPRCRF GFFHVVNNDYTHWLMYAIGGNMNPTIISQGNRFIAPDDLNAKEVTKREYTPYDEYKEW VWKSQGDVMMNGAFFNESGGQNERSYDQLDFIPAKHGKYVGQLTKFAGTLNCHVGMPC </aaseq> |
| Gene Sequence |
<dnaseqindica>1250..1604#154..1151#gccggtggtgccatcgtccgcacgtacggcgtccgtcacccggctgggaggtctcacgaaattacgcacttccctgagaccttccccgcggtgacgcgtgcgtcgtcagccggcgagccggaccaccacaaataaaggcatacattgatacatatggatatatatacgacatcacatcacagcacaataatggcagcctcctccgtcacggggagccgccgcctctgcattctcttctacctcctcactgtcgtcgccaccgtggtcaccgcggcgtcggcgcacacggcgcacaacgccaccgccgacgaggagtactgggagaagcgcgccgaggaggcccgctcgttcaaccgcgccgcctacgtgagcgaccccgtcgccaccctgaaccgcttcaacgccgacgtgctccgcgccaccacgcgccgctcgctggccaggtacaccggcccgtgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgaccggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgctggcaagatctacgtggtgaccgacgccagcgacgacgagatggtcatcccgaggaaagggacgctccggtacggcgtgatccaggaccggccgatgtggatcgtgttcgcgcgcgacatgatcatccagctccggcaggagctgatcgtgaaccacaacaagaccatcgacggccgtggcgcgcaggtgcacatcaccggcgcccagatcacgctccagggcgtccagcatgtgatcatccacaacgtccacatccaccactcggtgccgcacggcggcggcatgatccgcgactccaagcgccactacggcctccgcacgcgcagcgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccatgtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctccaacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagcaacagcgacgcccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggcaagggccttgtgccgcgctgcaggttcggattcttctttttattttaaagaattacacagtacaacgcacgcatactcactcctatgaatgcacgcacgtaaaccctacctctgtgaataggttcggattcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaacatgaacccgacgatcatcagccaggggaacaggttcatcgcgcccgacgacttgaacgccaaggaggtgaccaagagggagtacacgccgtacgacgagtacaaggagtgggtgtggaagtcgcagggcgacgtgatgatgaacggcgccttctttaacgagtccggcggccagaacgagcgcagctacgaccagctcgacttcatccctgccaagcacggcaagtacgtcggccagctcaccaagttcgccggcacgctcaactgccacgtcggcatgccatgctaattaactagacatatcagcaacgatatggaagaggacgagagaaagctaattaaccatgccttaatttgtatatatatgaaaatctgacaaatttgtacatgtgtaaaactttataattctcaaaagagaaaaaaaaacgtacattatatac</dnaseqindica> |
| External Link(s) |
