Os06g0186500

From RiceWiki
Revision as of 20:19, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0186500

Description

The start codon is not identified.

Version

NM_001063545.2 GI:297605329 GeneID:4340345

Length

4758 bp

Definition

Oryza sativa Japonica Group Os06g0186500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:4365078..4369835

Sequence Coding Region

4365078..4365182,4365274..4365358,4365493..4365553,4365878..4366009,4366108..4366240

Expression

GEO Profiles:Os06g0186500

Genome Context

<gbrowseImage1> name=NC_008399:4365078..4369835 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:4365078..4369835 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gatgaaagtatatacttagcatattcagacttccacccttatgttgttggagacttggcttgtacaaaggagctgaaccgctggttctcgaagcaatttgagaaggggccatttcgacttgttgctgaggaagggaagtccaaatgttcctgggttagtcttgacgacatcaccaatggcttgataagaggagattctgaaaaatcacatcatcaccagcgtgtggctgaattgcaacgacttcgttcaatatttgctacaagtgaaagacagtggattgaggcacaagttgaaaatgctaaacaacaggccatactctcgattttaaaatcacaagtgtcatctgacgaggctcatatacatagggatattcattctcttaggagaaaaggttctgagcttgctggagaactctcgactctttctcaaaaagtacaggcttttgtatctgaggtatgctctacccatgtagaggcactgccttttcttgcaaaatacttacattatattccctag</cdnaseq>

Protein Sequence

<aaseq>DESIYLAYSDFHPYVVGDLACTKELNRWFSKQFEKGPFRLVAEE GKSKCSWVSLDDITNGLIRGDSEKSHHHQRVAELQRLRSIFATSERQWIEAQVENAKQ QAILSILKSQVSSDEAHIHRDIHSLRRKGSELAGELSTLSQKVQAFVSEVCSTHVEAL PFLAKYLHYIP</aaseq>

Gene Sequence

<dnaseqindica>1..105#197..281#416..476#801..932#1031..1163#gatgaaagtatatacttagcatattcagacttccacccttatgttgttggagacttggcttgtacaaaggagctgaaccgctggttctcgaagcaatttgagaaggtaggttctctttggctgtcatgttattctcagcttacttatttatttaacacttattctgcttacttatttatttaacactttctgtcaggggccatttcgacttgttgctgaggaagggaagtccaaatgttcctgggttagtcttgacgacatcaccaatggcttgataagaggtaaataccagttatagtaaattgtatgcaatgaatagattgattatattatttaaagagcgtaactctgatcctagattagtatgatgtgctttgaatgaactaattatgaaaaactcattcctattatgcaggagattctgaaaaatcacatcatcaccagcgtgtggctgaattgcaacgacttcgttcaatgtaactatcccttgatttatcgcttatccaaagttccaaacctttctgtttgaacatatcatagtttttttttttaccatgaaacagaaggggaatcctctatgttgaacacatcatagttgctaatgtttcatgcaatcttgttatatggtgcctattgagatattcaagtgattttatttttcttcctattgcacttctttttgcatcagtctgctggaattttgtcattgtgctatcctcttatatgtctagaatttgctttatatctttgtggtgattctaatgaccttgaactgtaaacttgctctaatttgggaacagatttgctacaagtgaaagacagtggattgaggcacaagttgaaaatgctaaacaacaggccatactctcgattttaaaatcacaagtgtcatctgacgaggctcatatacatagggatattcattctcttaggtatacattcgttactgttcatcactattattttatcagaataactgaaacgaagaaaagatagatcaattacattctccgtatcttatttattttaggagaaaaggttctgagcttgctggagaactctcgactctttctcaaaaagtacaggcttttgtatctgaggtatgctctacccatgtagaggcactgccttttcttgcaaaatacttacattatattccctagttacaaaaattggcacttcatgagtctgtttagctggatgcatatgggtttgcctgtcaattgatgaaatgtatatggttttcgacagagttttcatcaacgtaatgccacatccatttaataccataagggttgaattgcatacttgcatctggtaggatttaatgattcattgcagattaaattcctatttcagaagaaaaagtgttccaagcactgtcataaaatagctttcagttgtgaaatctctaaaccacgggcagctagaaattataatctgttatgcagatattagctttgttctgctataagttctcaggaaaaagaaaaacactcatcacttataagatactttcagcacttagaggataatatgccaatagtaattcttactgcagtgcatcagacatacttcttttagcatatggttaaaattttcccgagataggcttgtttttcccagtattcactcgttctccccctccagactataccatgcctctgctcagaactcgctcaacttcaaggcacatatattttgcaaggtttgttgatgatatttacattactttcgctggcttacatgattctgttgtatcatttccttgatattctagcattcaaatatgtaggggactacgatttaaaggtcatgcgccaggaatactacattaacaggcaaaaaacggtatgcacattcatcacatggtatatatgtcatgtacacttatttattgtcagcagttcctttgtttgcttattggtggtatcttctataatgttatgaaagtttataatcgagataactattcagatagtgttattacctatttttccttctgccttcaaatctatgggtggtaagacacttgcaccaaatagcctagggggccaaatattcttgtgacaaactttcaatgtttagatttagttggcccctgggagtattcattagaaaatctggttgttctacaccttgttgaccctatttgtttttcgtatacactcagaagacaaatttaagtgatcagtgaaaaatgtgctgctagcttgcaccaatacatgctgagatcaccttaagccagctacttttgcatttgatggaacagtgttttacatttttctgccaaggtcatacatactgccaggcatatgattgttttattacacatccttctgattctgcactgtcttcattctgcagttcatcagtcacttggctaatcagctagccagacaccagtttctgaagattgcttgccagcttgaaaggaaaaacatagctagcgcctattcactgcttagagtaatagaatccgagttgcaaagctacctatcagctgtcaatacccgtttggtaagcaatctcatttgttgagaacctcctatgttgtcatttcttcttttttatgtgtctacatgtttcatgctacactcggtagtttttgttcaatctgcccttcttagttttccaagaaatgattcttagttgacctaacaaagaaatgttttttttaattctttagggccattgtacttcattaattcaagctgcgaccgaggtgcgtgagcaaggtgcaattgatgaccgtgacactctcctccatgccgtacgggatctcttatgtgttcactcaagtaagctgacaagtgacaactctactcagatagctgtttgaacgttttaatttcgatattcaatgtttcatgtcacttctgtagatgtccaagcaacaatgccaacatacatgtcagcgcatgccttggttcagcagatatcagcccttcaatctgatttgctttctcttcagtctgaacttgaaagtgctctgccagccgatcgcaaaagatgtatcaatgaactgtaagtgatactatagctcacactatgtctaaatatcagttgcctttactttatctcctgcctgaaatacgcaaaatcaaatttttgaattgttgcttttagtgtttcttctgatctaagcaaacctacccacattcttggtttagtgaatagaacagtagtgtcccatgttgttaaggcggtaaggcatcctaactcctggcagtccataggcagtatggtaaggtgggccagacgccattactcctggcagcgccttacagccatagcgacgctatggtgatgccttgataaccatgagtgcgtcaactgtgactgactctgaggtcctcatgtataatcaagttgaatattgagacaaccatgagtgcgtcaactgtcactgactctgaggtcctcatgtataatcaagttgaatattgagacagatgatacttttcaagtttgcaacggatctttggttggtacggtttgcttgttggcttaactttgcgtcttcacctatacatgatgaactgttgtctcagccccctcatctactgctcaaatataaatttccttttagctggtggtggtgaatcttccacggtgccaccaatcctctacattacattttctaaaaactagcccctacagtttttagcattacggattatagtccatttatatactgatttggcctccttaaattcaaatttagcagtcatttttcatcctttccactcttgcagatgcaccctaattcaaacagtggaacaacttctatttgcatcatcgacgactgcagaaccaatattgacaccttgggtacattctttcatccttaaaattatcccatttcttatatctcccgtgttattttcagcactccttccttttccttttgaaagttatgaattgtttttacctgtgcttgtgaactaaatctatgcttggcacagcctctgatgcgagcactcgatgatatggaaaatgccaacgcacaagttgaagtttctgtggaagaagtaacgaaggctcgcacccaaaagataaaggtattatcatgtgcttcttttccctagtccctaccaaataacatggcaaagcttgtgcgttacatattcatcgataagcatcatggtctcaattgcacattagatctttgagaatcgcgctcatgaagttgggagggagaggcaagtgttcgtcgatttcttcagcaaccccgagcgactcaagaatcaagtcagagagcttacctcccgtgtgaaagctctccaggaataaatagatagatagatatccctcgtctagtttggtaagcacatgagattcaatctctacccctgttgctcatatacaagccataaaatctcaccctctgtttctagcatttgtgtgccaggtcgtcccgcgaaatgggaagcaacagccaagctcgcaatgatgctgttgcttgcaaagtttcccttcctccaatgcgaagtttgggggaaccatcggttagtttgttggatgttgaggtgcacagctgctgttgttatattttggggatgcagtcgtgattgttgtaaagtaaccacgagcccgtttcgtcgtctgattgatattcaggctagatggtggttgtacatttgtgtactggtgttgggagactcgaaaactagcattgcttagtgtgtatattagattgatcttcaattatttgaacactgctaatgagccctatattagattgatcttcaatta</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0186500, RefSeq:Os06g0186500