Os06g0193400
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os06g0193400 |
|---|---|
| Description |
Similar to Helix-loop-helix protein homolog |
| Version |
NM_001063578.1 GI:115466887 GeneID:4340382 |
| Length |
5787 bp |
| Definition |
Oryza sativa Japonica Group Os06g0193400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:4708767..4714553 |
| Sequence Coding Region |
4709097..4709336,4710082..4710150,4710243..4710308,4710998..4711063,4711185..4711346 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:4708767..4714553 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:4708767..4714553 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggactactctgctggttcctacatgtggcctggcaattcaggttctgagaactataattttgttgacggttcgtcggaatcatatgcagaagaaggaagcctaccaccttcaggctatttcatgggagctggatcagatcgcagtttaaagatcacggagaatgaaaggaaccccactatgcttgcaaatggatgcttgccatacaacacccaggctcatccattatctggccagattctacctaagggtgagctccctaacaatcttctggatcttcaacagctacagaacagcagcaatctgcgaagcaattcaattcccccaggggttcttcagtgcaattcaacatctggaacatttgatgcgaaattggatacacctggtcttgcagaactgcctcatgctttgtccagttcaattgatagcaatggtagtgacatttctgcttttcttgctgatgtgcatgccgtttcttcagccccgacgttgtgttcagcattccaaaacgtttcctccttcatggaaccagtaaatctagatgctttcggtttccaaggggcacaaaatgttgctatgttgaacaaaacaagtcttccaaatgggaatccctcgctgtttgataatgctgccatagcatcactacatgatagcaaagagtttctcaatggtggttccatcccttcgtttggtactgtcctgcaggcactaggagcgggtggtttgaaggctgctcaacaggagcaaaatatccggaatatacctctccctacattcacatctggtagtcatttggcagttactgatgcacaagggccaccacttccttcaaagataccaccattgatccatgaccataatagtgagtaccctattaaccattcttctgatgtggaaccccaagcaaattcagctcctggaaatagtgccaatgcgaagccacgtacaagggctcgccgtggacaggcaactgatcctcacagtattgctgaacggcttcgccgagagaaaatttcagaaaggatgaaaaatctccaagtccttgtcccaaactccaataaggcagataaggcatcaatgcttgatgaaataattgattatgtgaaatttcttcagcttcaggtcaaggtattgagcatgagcaggctaggagctcctggagcagttcttccccttcttagggaatctcaaaccgagtgccatagtaatccatctctatcagcttcaaccatttcacaagggccaccagacatgccagactcagaagacagctctgcctttgagcaagaggtagtgaagctgatggaaacgagcatcatcagcgcgatgcagtatcttcagaacaagggtctctgcctgatgcccattgctctcgcttcggccatatccaaccagaaaggcatggctgctgctgctgcaatccctcctgaaaaatga</cdnaseq> |
| Protein Sequence |
<aaseq>MDYSAGSYMWPGNSGSENYNFVDGSSESYAEEGSLPPSGYFMGA GSDRSLKITENERNPTMLANGCLPYNTQAHPLSGQILPKGELPNNLLDLQQLQNSSNL RSNSIPPGVLQCNSTSGTFDAKLDTPGLAELPHALSSSIDSNGSDISAFLADVHAVSS APTLCSAFQNVSSFMEPVNLDAFGFQGAQNVAMLNKTSLPNGNPSLFDNAAIASLHDS KEFLNGGSIPSFGTVLQALGAGGLKAAQQEQNIRNIPLPTFTSGSHLAVTDAQGPPLP SKIPPLIHDHNSEYPINHSSDVEPQANSAPGNSANAKPRTRARRGQATDPHSIAERLR REKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGAPGAVLPL LRESQTECHSNPSLSASTISQGPPDMPDSEDSSAFEQEVVKLMETSIISAMQYLQNKG LCLMPIALASAISNQKGMAAAAAIPPEK</aaseq> |
| Gene Sequence |
<dnaseqindica>5218..5457#4404..4472#4246..4311#3491..3556#3208..3369#3023..3115#2829..2921#2097..2744#agaaggggtgtactagtaaacaaaacaaaaagaataggttgagactttcctgctatcgtcagcattttcagcccccctcccctgggctggctctgcatcatcattcatcatcagcagcagtcagtccatccaacgcgtcttcagtcctcacccgcagcaagaaagccacacttttcctcctcctcctcctcctcctcctccgcctcttcctcttcctcccccttcgttctccacacccactctcgggctgcggcttctccggcttccgcgcctcttcctctgtcggtgagtgctgcgaaattttgtggttcttcagttaaggccgtgtttggctgcatggtgggtgggtgtgtctatctgttcttggggaggtttggggattttgggaggttagcggcggggtttcttcttcagctatgattttttcaggtcgcgggtgtggtggttagcggcgtttcttggtggggttttggttttgtgaggggagaagggaagaagggcaatgtcaaagatgggcgatcgtgtgagtttgatggtttggttggtgtgcatgtaatgttttctggttcttgattgtttctcctttatgaaatcgcggaagataagaattttctcgattgtatagttgggtaaaaattggctctttcttgttatcgaatttctaacttgtttttgtttcatggaaatcctattggtggaaaaggataaggataaggcacttgcctggttttcaaagaaggtttttgtgatgatattacgattgtataggtcaagcatgtgtgaattcatgggaatgatattacgattgtagagctcgtatgatcaagaagctcttttttttttgcatgtaatgatttatccactggcaccatttttagtttttgcaatcagcagtctcaaactgtgaaaattgtgtgctttcagcctttccctttggttttattgctcattgatagcctgttacttcttttttttacgataatagatttaggaattttgacaaatctttgcagtgctgatagatacatagtactatacattttcttttttttagataagtatacattttcttgttactgcctagacaagaacagtccaaactgactacaagcatggtatgcagcagaatgtgaactagcatttgaacagttggaggatgcatgtcggttttattacattcatagcctagctttaaagagaggatggtattgaatattgaatgtgtgtaattataatcgacaatagttacatgataaagttaagaggtcaggtttcttctactgaaaggtggaagaatatttgcttgttacaaattgattgtatggaactatgaattggttgcttccatttcccaaagaaaatgagttgccgctgtagaacaaaacagaaaataagtcctaatgatctgcaatcaatcgaattagaatcattccatttgtacaaatggtggcttaggacagcagctgtggtttcaatgttcatgtacgttctgttttgtgtataacaaacaatggcgcagattggaagcttgtcttgtatctaagttttcataatgcactaccatccatgctatatttgctgtccttatgttcttttagttagttcatcacaaatattagatataatttcaactatgcttggtttagctgtttgtgacatctctgcagtttgttaaggaaaataaatgcggaccatggaaaaattcaaaatcccttatttaaataatttgtgtattaaactgacatgaatatgacacgagtgtgttttagctgaggatcttttgtcaactgtatgcatcaagcaagaattgtcctactaatattttaatacttgtttattgatgtggttaacgcgtgctataagataaccaactttataagtagtagctattatagtattgtatatataccatcttctcatttgacaatatcttttaaatattgtgcacagggttaacaaagttactttcagcgtcagagggtatttcgtacaaaaaggaactgctgttggtacaggattatcagctgtgaacactttctgtttctagaggccattctctgtaacactttggagcatcaattttgtagcgtgctatcatggactactctgctggttcctacatgtggcctggcaattcaggttctgagaactataattttgttgacggttcgtcggaatcatatgcagaagaaggaagcctaccaccttcaggctatttcatgggagctggatcagatcgcagtttaaagatcacggagaatgaaaggaaccccactatgcttgcaaatggatgcttgccatacaacacccaggctcatccattatctggccagattctacctaagggtgagctccctaacaatcttctggatcttcaacagctacagaacagcagcaatctgcgaagcaattcaattcccccaggggttcttcagtgcaattcaacatctggaacatttgatgcgaaattggatacacctggtcttgcagaactgcctcatgctttgtccagttcaattgatagcaatggtagtgacatttctgcttttcttgctgatgtgcatgccgtttcttcagccccgacgttgtgttcagcattccaaaacgtttcctccttcatggaaccagtaaatctagatgctttcggtttccaaggggcacaaaatgttgctatgttgaacaaaacaagtcttccaaatgggaatccctcgctgtttgataatgctgccatagcatcactacatgtaatgatcaccaattcaccacatatacataattgccatattatctgcttcattgaattattttttgctcttttggcaatccaggatagcaaagagtttctcaatggtggttccatcccttcgtttggtactgtcctgcaggcactaggagcgggtggtttgaaggctgctcaacaggtttcaatttcaagctttaccactaaacagcaattcccacatccgcagctcactatccactcaattctaactgtactgatgaatcaattttcatattgcaggagcaaaatatccggaatatacctctccctacattcacatctggtagtcatttggcagttactgatgcacaagggccaccacttccttcaaaggttctatttgcatttctcattgacagtgtttcactttctttctcttcaattttatacctcaacagttgaattttgtgtatgaaaatgttcagataccaccattgatccatgaccataatagtgagtaccctattaaccattcttctgatgtggaaccccaagcaaattcagctcctggaaatagtgccaatgcgaagccacgtacaagggctcgccgtggacaggcaactgatcctcacagtattgctgaacgggtgagttcttttataagatcagttcactttgaaacaaatcaaactgttgcataataatcgattattttttttaatttgtgtgcacccatggtcttaaatataatttctcattgtgctgcagcttcgccgagagaaaatttcagaaaggatgaaaaatctccaagtccttgtcccaaactccaataaggtgctttttttgttctgagtcaccacaaaaatgcaatccgcttctccccctgttgttattgctgtcatattcataactgttgattgataacaactaagagtatactaggggaggatacatacttaagtatgttgggaaattgaccaaatgggacaaacagaagcaagcatttttttggattatcaaatagatcagatccaagtattgatcttttggtgcagccaacacatgggcgttagatgtaccgttgtctttgtttcaggtggatgggatttataatgttgctgatacatatattctgccttcaatgcaattatttttttattggcatctatctatactccttttcaaagaaaacaatggtggtggcagtgaatctgccaccccacctctattatatagagtattgtttatgcttttactaaataccccttcatgtgttttacaaaatagttttctacatatgattctattttatttcatctctaaaatacaaatttattatgcaaagacatctacagggaataaattgtcccaaaaacatcacaataatttttccaagcaatattagcacatgtataatttattttaatccgtagcaaagcaagtgtatttagctagtatagaataaaatgtatacaaattttggtttagaactcctgacaattaacccttctttgtatgagcaggcagataaggcatcaatgcttgatgaaataattgattatgtgaaatttcttcagcttcaggtcaaggtacatctgcagtcaggtttatttggtgtgtgggatgaggtgggggcgttagctccttttctgatggctgacagtcttcttgaattctgtaggtattgagcatgagcaggctaggagctcctggagcagttcttccccttcttagggaatctcaaaccgaggtgtgcagctttcctatttctttatgtttccaaacagaatccttgttagaaagactagttgaatgtaggctgtgctatgttaaaagattgtagagctatggaaacaagtcaatttattttaacctcagttttttccccttaaattacatttagatacataacaaataacatcagtccaaatattcatgaccattccatgatttcatatgaacattggcttgcctttattaatttatttgctctgtgagattagttttgaattgcccattattgcgaccattggcatcaagataggacaaacgaagatatacctttgcacttgtgtacgaggggaacaaaaccttctgtgatcaaaactgcttatgcattgtgccattatgcttcaataatcaatactgcttaacttttttttgtgtgttctgattaaattaataagataactaaccaaaacttgtgctttcttgggttggcatcttaattggctacattataaataatatattatttatatgtagtgcaacatatgcatatccagtttcaagttttcgacatcctagatcagttctaccataatattgtagcctactggaagaatctttctgtgcattgtagtcccaatttatatccgagatttgctcctctggttttcattgagtttacttaaatatgtaataactgatggggccacaattcacctggatctcactatgtctgaaataaccatctactcattgaacttctgcagtgccatagtaatccatctctatcagcttcaaccatttcacaagggccaccagacatgccagactcagaagacagctctgcctttgagcaagaggtagtgaagctgatggaaacgagcatcatcagcgcgatgcagtatcttcagaacaagggtctctgcctgatgcccattgctctcgcttcggccatatccaaccagaaaggcatggctgctgctgctgcaatccctcctgaaaaatgaaaaaaaaaatgaaatcggaaaaatatggggggaacaactgcagaagacataataactcaacggctgcagaaatgtgctggacactgcaggttttgtgaatgaagtgaaatccaatccagggggtcataaaacataggaagttatctgactaattcaggcttatgacacaatctactctatagtctatagctattgtgtgcctgttgcacatcagttgatgtgtattcttttgttttttttgtattgcatccggatgctaattaggtagtagtgtttcctttgatgtacatgagtattatctatgcggttttatctaatgtgcatataaag</dnaseqindica> 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