Os06g0231600

From RiceWiki
Revision as of 20:20, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0231600

Description

Zinc finger, RING-type domain containing protein

Version

NM_001063758.1 GI:115467247 GeneID:4340574

Length

2852 bp

Definition

Oryza sativa Japonica Group Os06g0231600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:6807877..6810728

Sequence Coding Region

6807877..6807885,6808865..6808966,6809321..6809488,6809730..6809813,6810111..6810289
,6810602..6810728

Expression

GEO Profiles:Os06g0231600

Genome Context

<gbrowseImage1> name=NC_008399:6807877..6810728 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:6807877..6810728 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtggcgccggcggcggccatgacgagggcggaggaggagagtcgccgtcgcgcggcgacgcgcctccccaggctgctccgcggcgtcgtctccggcatgctcaccggtatattcgccgtcgctgggggcttgacgggggcggtcaccggagcattggccgggagagcctccgacggcggcgttctccggggagctgggctagggacatttgctggtgctgtcctctccattgagatccttgaggcctctcgcgcgtattggtgccaagatcgatcaagctcgcctggttcattgtccatgggtgattttgtaaagcagcttattcatgctcgttttgtgcaagagcagaatgaggcatcaggacatatcacatatcgttggcaggttggtattgcagacgttgtcaatggtgctgtacatgaaatcctaggagatgttccatccggagaagggctttcaaaatattctttaatgaaattgccataccatgtcgtgatagatcataataatggctcaattggggaaagtttgtcttgccctgtttgcctgcaggatgttgtggctggacagacggtgaggagattgccgaaatgctctcacactttccatcagccttgcgtggacaaatggctcgttggccatggctcgtgccctatgtattaa</cdnaseq>

Protein Sequence

<aaseq>MEVAPAAAMTRAEEESRRRAATRLPRLLRGVVSGMLTGIFAVAG GLTGAVTGALAGRASDGGVLRGAGLGTFAGAVLSIEILEASRAYWCQDRSSSPGSLSM GDFVKQLIHARFVQEQNEASGHITYRWQVGIADVVNGAVHEILGDVPSGEGLSKYSLM KLPYHVVIDHNNGSIGESLSCPVCLQDVVAGQTVRRLPKCSHTFHQPCVDKWLVGHGS CPMY</aaseq>

Gene Sequence

<dnaseqindica>2844..2852#1763..1864#1241..1408#916..999#440..618#1..127#atggaggtggcgccggcggcggccatgacgagggcggaggaggagagtcgccgtcgcgcggcgacgcgcctccccaggctgctccgcggcgtcgtctccggcatgctcaccggtatattcgccgtcggtacgcgcctgctctctctctctctctctccctctttcgtggtcgcttatcgcaaacaatcaggaaatcagcgtgtgtttcttgtctggtacggaaaggatcgccatggttggaacttcgaagcttaattaattagccaagaaatctattaaccggtgaggcgtgcgactaatttcttgtgatccctgaagattattggaatttcgaaatgcttgatataggattaatccgaacgtttcttcgagctcttcttcttggtgctgattttggtttctttgtgctggtttggtatgaaatgatggatgaattaagctgggggcttgacgggggcggtcaccggagcattggccgggagagcctccgacggcggcgttctccggggagctgggctagggacatttgctggtgctgtcctctccattgagatccttgaggcctctcgcgcgtattggtgccaagatcgatcaagctcgcctggttcattgtccatggtgcgtaagcttcttgattctttcaactgttcaatcaatcattcattcttgattcttcagctgttcaatcaatcattcattcaactgttcaattaatcattcgcgcgttttggtgtccatttggattgcattaattgttgtgtttgatagttctcttttttgttttccctgaggagtatttgggccaagattttagaaaatgttttgaggtgtttttgtgaaatgtttttaattacgatgggaaattggccagtggcaaaatatgcttatatgaaaaataatttgtttggcttccagggtgattttgtaaagcagcttattcatgctcgttttgtgcaagagcagaatgaggcatcaggacatatcacatatcgttggcaggtcagtgtctcatttcatatatgacaaataggtttatggccacgactgggattcgcaaaagtatccttttttggggggcaaatattcagtggtatacagtgagtgaagaattcaaatgtcaattggcttgtgttggaatttcaaagtttaatgaccactcttttttcactgaaagtttacatactctttttcttaaacaaattttattaatattttttataacaaaatgctatgtcaacaggttggtattgcagacgttgtcaatggtgctgtacatgaaatcctaggagatgttccatccggagaagggctttcaaaatattctttaatgaaattgccataccatgtcgtgatagatcataataatggctcaattggggaaagtttgtcttgccctgtttgcctgcaggtacaagctccacatcacatatactgggaatcgaatcctagtactattccattcattttaaaataagttcacttttatattggaatgattcatgtataaaagtgattttttagaaggtagtacatatttgtatattggagtatactcctaagtcctactaactatcaaatcgaagtagctcgcagtgtagggattcttttgcttagaacatggaatttgatttgctcaaaagaacttggaatttaacttgtctgaatatttaccatgctatttttgtttgatttaatttggatatcctgaccgatttccttcaaaataaaaaagatatgctgacggattgaattgctcttgtaggatgttgtggctggacagacggtgaggagattgccgaaatgctctcacactttccatcagccttgcgtggacaaatggctcgttggccatggctcgtgccctgtatgtaggcaacatgtgtagatcatagatgacgtttggctctcctagaaccaaattgacatgcttttgtggcaaatatgtgttataatcatgcacagaaagtttctacccaactgtaaatcagtcctacatacgtgcgtctctctcaaaaaaaaaaaaagttctctgcatcggatgcgctctgggttaaacatttcattttcccacttggttgagaacatgagatgtaacaaaatagaagtgttcgtttttctgttatgttatatctggaaaaatgggtgtgcactgtgatgtcgctgcaatgttcacattatcaatcggactacagccatctctttgcaaccagatgcgctactacgacggtaaataattattccatctttagttcttgtttttttacccgtgcgttgtaacgggtgaatgttattttaattttattattgttatacggtttagttaggatgaagttcactttgggaattcgcttggattttttttttaagaaaatcataagctgcaattagaagtttgactttcatctcaaattagcatgcaatttttttaaagagatttttatacaactccttatgtattttttaaaacgaacaaacttaaaaaccgactcaaatacggatatgtatttccaaaagcgaatgaacttaaaactgactcatacacggacgatctaccaaaataccggtaaaaacatctgaaatttttataatagtagagatacggtatgaatctcatccattcaacattctcggaagtcggaacagattttcccggacgaaggtcttatgtcgtaggaccttaaagcataaagaatgattaggactgactcctgtctgtataaatttttcacatcatatctagacatataaacaactggcacaataggttatttgctggttgtctcaaataaattcatataattaatgatttgagtatataaatagcttgtagattaatggtgcagatgtattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0231600, RefSeq:Os06g0231600