Os06g0363701
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os06g0363701 |
|---|---|
| Description |
Reverse transcriptase, RNA-dependent DNA polymerase family protein |
| Version |
NM_001187854.1 GI:297724838 GeneID:9267005 |
| Length |
7133 bp |
| Definition |
Oryza sativa Japonica Group Os06g0363701, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:15168069..15175201 |
| Sequence Coding Region |
15168069..15168938,15169361..15169504,15170533..15171225,15171798..15171998,15172179..15172632 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:15168069..15175201 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:15168069..15175201 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcggaggtgttttactccggagatgaagaagatcccgaggtcaagcccaagcccaagccgaaagacaaggttgaaggagaaggtggtgttgctaccgtcgccttcaagtcatcttcttcaagcaagaagcgtctcttcaacaacttgagtgatgacgacgacgacttctaccactactcttgtttcatggcccaaggccgcaaggtgatgactcaaaagcgctctcacacctctcttgatgttgattctagtgatgaggaaagtgataatgaattagatgatgtgcttaagagctttagaaaacccgctatgcaacatttggctaagttaatgagagctttggatagtaaagaacaatcgctcgaaaggcaagaagaattacttattcttgagaagaaaagaaaccttgccttagaggagagcctagctaaagaatgtgctaaaaatgaacaactggctaatgagcttaatttggctaatggttctctagctagccttagtgatgtcaatgaaactcttcaagagaagtttgctagtttagacaaaagtcataaagatcttgaagttcaatttgacactctttggaatagcacttctcaaccaaatgtggtttctaattcttccaacccatctacaagcaatggttgtgctaggtgttacaatattgatttgaactctcatactactaatgttgatgctatgcaagctcttaagaaagagaatgaaaggttgggcacattggtgaaatatggatgcatgaagacataccattcaaaagatgccctttacaagacaatcaatcatcttaacatggatggacacgggctcgggttttctggtggaagtcctgtgtctaagcgtgtgatggcatactcctccggtggctcaagttgggttgtggacagtggctgcaccaatcatatgacgggagagaggagtatgtttacaagtcttgatgagggggctggaagtcgtgaaaatattgtctttggagatgatggtaaaggaaaggtggatgagggattcttacttagctatgaatctaatgcacatgcctattgtgtcttcaacaaaacctctggtattgttgaagtcactagggatgtgacatttgatgaatctaatggctcccaaggagagcaagttgttgtacatgttgtagggggtgtggatccaaatcaagctattggtactaaggctattggagacatacgaccagtcgagacgcaggatgaccaagaagatagggatcaacctccgtcaccggcatccaacagccctacaagtgttgtgtctgctgagtcggaaattccgggtcctattgaccggaacctccggacatctctaggcccggaagttccgggttctatagtccggaacctttggatcagtggcagtgaagacatgccaacggcacaagtggatgggatcgatgctgagggcactttagagcattctgatcaggctcaggtccccccagtgcaccatccaaggatacatcacactgtccaaagagaacatcctgttgacaacatacttggtgacataagaaaaggggtaactactcgctctcgtatcacaagtttttgtcaacacttctcgtttgtctcttctttggaaccaaccagggtggaagatgtgcttggtgatccggattgggtgatggctatgcaagaggagttgaataacttcactcgcaatcaaatgtctatgatgggcgagttgaccttcttcctcgggctacaagtgaagcaagcactagagggcaccttcatctctcaaaccaagtacgtgaaagacatactcaagaagtttgggatggaggatgccaaacctatcaagacgcccatgcctactaatggacacctagacctcgaccataatggtaaatgtgtagaccaaaagggttgtggctttgagcttttgggctattccgattcggattatgccgggtgtaaggttgatagaaaaagtacaaccgggacttgtcaattccttgggtggtcccttgtttcttggtcctctaagaagcaaaattccattgccttatcaactgccgaagccgaatatgttgccgccgattcttgttgtgcccaactcctttggatgagacaaaccctaaaagactttggctacaacttcaccaagatcccactcctatgtgataatgagagtgccatcaaaatagccaacaatcccgtccaacactcaagaaccaagcacatagacattcgccaccacttcttgagagatcatgagactaaaggagacatatgccttacccatgtgacaaccgaaagtcaattagccgacattttcaccaagcctttagatgagaaaagattttgcgagctgaggagttttcatttccaaatcattgaattctcatctattccattgaacttgggcctgactgccctctgttctgtcaggctggaagttccggtcaccccagtccggaacttccgggggtcggggggtataaatacccagggggagcctgagcctgtagtcattatgcctcgtgagaagagacaaaagctttctcaagatattcctgctgactcgagccccccgattccgatccattccaggagggctggtagcattgtcattcgtgatgcaccccgctctccctccccaactgcatctgagtcagatgatggtggcaatgaggatgagccaggttctgaaagcaatcctttgaggctgtacaagacaagggctgttgatcctgatcctaaacgcccaagagtgaactatctgaagaatctactcaagtgtggaaaggacagaatggttagtcctgatactctgccagctgactctcaggatgacagattcaggaccttggtgcaggttgattggtataactctgtgatcatgggaagatctcatccagtggtagagatgaagtggctagactggaagtacatgtcctcaaagaacaacatagtcttcaatgaggtacgcaaggtgtgtgagcacaagcacgcggcagatttgttggccttgcagtattcctggaatgaggaagtgattggacagttctactccactgctttctttggcaccaccaagaaggggcttgattttgtgaagtggaccattcaggggcagcagtatagggtttctatggcacaatttgttgcagctttggggttagatgatgatgacctgagtcgtccacatatctttgtagaggatgctctgtcaccgaccagcactacctttatgtatgagaaggatgctcccaaggattgtttggggactactcgagggttgcatccatattatagagtgctatactctatcttcaggtggtctttgctccccaaagtgggagatgctacagctcttccaggtaggcatgcgctcctcctcagtcgcatgcgctacaacaagcccgatttcagcatcatgaagcttatctggagtgagatctatgagacagtgtgtgagccaaagaggggttgcatctatgctccttatatcatgaagatgattgaggccaagactgggatttgttatttcaaggacaatcaatacaagcctttccgtccacatgctcccactacttcagctactcctaccaccagagtgacaagtgcttccacctcagctgctccttctttctctgctgcacctcagcgttctgagtcttcttctcccataaagaaggctctcaaggctatcttttgcatgtgtgccaagacagctaagaaggtaaagaagatagagaggcgtcaaaaggaagattggattgcagtaggcaaggatgtctctgacatttctgatgatgaggagtttgttgatccttttgctgcttatgagactgctcaagacattggtagtggtgagggtccctctggcacttctcgtttcttcaatgaggagtcctgtcactccgaggagagcagtgatgatgaggagtcagatgcccctaccgagaatgttcctacagatcccgatgaggcagtggacgccgccgggcaagacatcgactctcctcactccggcgacactgagatcattccttctgatggcgatattgatgaggcttga</cdnaseq> |
| Protein Sequence |
<aaseq>MAEVFYSGDEEDPEVKPKPKPKDKVEGEGGVATVAFKSSSSSKK RLFNNLSDDDDDFYHYSCFMAQGRKVMTQKRSHTSLDVDSSDEESDNELDDVLKSFRK PAMQHLAKLMRALDSKEQSLERQEELLILEKKRNLALEESLAKECAKNEQLANELNLA NGSLASLSDVNETLQEKFASLDKSHKDLEVQFDTLWNSTSQPNVVSNSSNPSTSNGCA RCYNIDLNSHTTNVDAMQALKKENERLGTLVKYGCMKTYHSKDALYKTINHLNMDGHG LGFSGGSPVSKRVMAYSSGGSSWVVDSGCTNHMTGERSMFTSLDEGAGSRENIVFGDD GKGKVDEGFLLSYESNAHAYCVFNKTSGIVEVTRDVTFDESNGSQGEQVVVHVVGGVD PNQAIGTKAIGDIRPVETQDDQEDRDQPPSPASNSPTSVVSAESEIPGPIDRNLRTSL GPEVPGSIVRNLWISGSEDMPTAQVDGIDAEGTLEHSDQAQVPPVHHPRIHHTVQREH PVDNILGDIRKGVTTRSRITSFCQHFSFVSSLEPTRVEDVLGDPDWVMAMQEELNNFT RNQMSMMGELTFFLGLQVKQALEGTFISQTKYVKDILKKFGMEDAKPIKTPMPTNGHL DLDHNGKCVDQKGCGFELLGYSDSDYAGCKVDRKSTTGTCQFLGWSLVSWSSKKQNSI ALSTAEAEYVAADSCCAQLLWMRQTLKDFGYNFTKIPLLCDNESAIKIANNPVQHSRT KHIDIRHHFLRDHETKGDICLTHVTTESQLADIFTKPLDEKRFCELRSFHFQIIEFSS IPLNLGLTALCSVRLEVPVTPVRNFRGSGGINTQGEPEPVVIMPREKRQKLSQDIPAD SSPPIPIHSRRAGSIVIRDAPRSPSPTASESDDGGNEDEPGSESNPLRLYKTRAVDPD PKRPRVNYLKNLLKCGKDRMVSPDTLPADSQDDRFRTLVQVDWYNSVIMGRSHPVVEM KWLDWKYMSSKNNIVFNEVRKVCEHKHAADLLALQYSWNEEVIGQFYSTAFFGTTKKG LDFVKWTIQGQQYRVSMAQFVAALGLDDDDLSRPHIFVEDALSPTSTTFMYEKDAPKD CLGTTRGLHPYYRVLYSIFRWSLLPKVGDATALPGRHALLLSRMRYNKPDFSIMKLIW SEIYETVCEPKRGCIYAPYIMKMIEAKTGICYFKDNQYKPFRPHAPTTSATPTTRVTS ASTSAAPSFSAAPQRSESSSPIKKALKAIFCMCAKTAKKVKKIERRQKEDWIAVGKDV SDISDDEEFVDPFAAYETAQDIGSGEGPSGTSRFFNEESCHSEESSDDEESDAPTENV PTDPDEAVDAAGQDIDSPHSGDTEIIPSDGDIDEA</aaseq> |
| Gene Sequence |
<dnaseqindica>1..870#1293..1436#2465..3157#3730..3930#4111..4564#4895..5044#5516..5583#5646..7133#atggcggaggtgttttactccggagatgaagaagatcccgaggtcaagcccaagcccaagccgaaagacaaggttgaaggagaaggtggtgttgctaccgtcgccttcaagtcatcttcttcaagcaagaagcgtctcttcaacaacttgagtgatgacgacgacgacttctaccactactcttgtttcatggcccaaggccgcaaggtgatgactcaaaagcgctctcacacctctcttgatgttgattctagtgatgaggaaagtgataatgaattagatgatgtgcttaagagctttagaaaacccgctatgcaacatttggctaagttaatgagagctttggatagtaaagaacaatcgctcgaaaggcaagaagaattacttattcttgagaagaaaagaaaccttgccttagaggagagcctagctaaagaatgtgctaaaaatgaacaactggctaatgagcttaatttggctaatggttctctagctagccttagtgatgtcaatgaaactcttcaagagaagtttgctagtttagacaaaagtcataaagatcttgaagttcaatttgacactctttggaatagcacttctcaaccaaatgtggtttctaattcttccaacccatctacaagcaatggttgtgctaggtgttacaatattgatttgaactctcatactactaatgttgatgctatgcaagctcttaagaaagagaatgaaaggttgggcacattggtgaaatatggatgcatgaagacataccattcaaaagatgccctttacaagacaatcaatcatcttaacatggatggacacgggctcgggttttctggtggaagtcctgtgtctaagcgtgtgatggtaaatgggaaagaatgcttgatgtttgtatgagaaggaaaagctccacaagcaagtgaggtgacttgtcccctcactggtcagacacccggaagttctgggcaaaatgaccggaagtttctgccctgtaagataggaagttccggacgttttttcaagaagttccgggcttctaataggccgaaggggctgaccggaagttccgggtataatgccaggaagttccggccagagggtctttactatgattcatatgtaatttccaaaaattcagagggcaaagtagttgcttattttaatgggaattacaaagatgagtaccgcacttgtgtgtgggtgccaaaggctttggtgactaacatcaagggacccaaacttagacaagtttgggttcctaaatcgaagcttgatctcttttgtaggcatactcctccggtggctcaagttgggttgtggacagtggctgcaccaatcatatgacgggagagaggagtatgtttacaagtcttgatgagggggctggaagtcgtgaaaatattgtctttggagatgatggtaaaggaaaggtaatggatctcggtaagattgccatttccaagaatcaatctctatctaatgtcctccttgtcaattcattaaggtacaatttattatccgtgtctcaattgtgtaagttagaatttaattgcttgtttaccgatgtggatgtgaccatttttaggcgagatgactcttccatagcattccgggtgtgttaaagggtgatctctatctcgttgatttcgacgtgaatagagtgaatccggaggcatgcttgattgctaaatcctctatgggttggctatggcaccgtaggctagcccatgttggaatgaggaatttggcatctcttctaaaaggggaacacattcttggtctatataatgtttcttttgagaaagattgtgtgtgtagtgcttgccaagccgggaagcaagttgggagtccacatcctataaaaaacatcatgactacaacaagaccactcgagcttcttcatatggatttatttgggcccgtggcctacataagcattggaggtaacaagtatggtttcgtcattgttgatgatttttcacgcttcacttgggtgtactttctccatgacaaaagcgaagatcaagatgtcttcaagcgcttcgcaaagcaagcccaaaacctctacgatctcactatcaagagggtgcaaagcgacaatggaggagaattcaagaacactcaaatggaggaatttcttgatgaagaaggaatcaagcacgagttctctgccccctatgatcctccccaaaacggcattgttgagaggaagaaccgaaccctcattgaagccacaagggcaatgcttgatgagtacaagacttcgaatgtcttttgggcggaagccgtgagtaccgcatgtcatgccatcaaccgcttgtacctccacaagatcctaaagaaaacctcatatgagctcttgagtggtaagaagcctaatgtttcatattttcgtgtctttgggagcaaatgttttattttaagtaagaggcctcgctcatctaagttttcacctaaggtggatgagggattcttacttagctatgaatctaatgcacatgcctattgtgtcttcaacaaaacctctggtattgttgaagtcactagggatgtgacatttgatgaatctaatggctcccaaggagagcaagttgttgtacatgttgtagggggtgtggatccaaatcaagctattggtactaaggctattggagacatacgaccagtcgagacgcaggatgaccaagaagatagggatcaacctccgtcaccggcatccaacagccctacaagtgttgtgtctgctgagtcggaaattccgggtcctattgaccggaacctccggacatctctaggcccggaagttccgggttctatagtccggaacctttggatcagtggcagtgaagacatgccaacggcacaagtggatgggatcgatgctgagggcactttagagcattctgatcaggctcaggtccccccagtgcaccatccaaggatacatcacactgtccaaagagaacatcctgttgacaacatacttggtgacataagaaaaggggtaactactcgctctcgtatcacaagtttttgtcaacacttctcgtttgtctcttctttggaaccaaccagggtggaagatgtgcttggtgatccggattgggtgatggctatgcaagaggagttgaataacttcactcgcaatcaagtatggactttggtggagagacccaagcaaaatgttatcgccaccaagtggatctttcgcaacaagcaagatgaacatggggtggttgtaaggaacaaagcccggttagttgcgcaaggattcacccaagtcgagggtctcgattttggtgaaaccttcgcacctgtcgctcgccttgagtcaattagaattcttttagcctatgccgctcatcatgatttcaggttattccaaatggatgtcaagagtgcctttctcaatggacctatctcggagttagtctatgtggagcaaccaccggggttcgaggatccaaagttgccaaaccatgtgtacaagctccacaaggcgctctacgggctcaaacaagcccctagagcttggtatgaatgtctccgagattttattttgaaaaatgtttttgaaattggaaaggcggatactactctcttcactaaaaaatttaagagtgatttattcatatccaaatttttgtcgatgacataatatttggttctactaatgcctctttttgtgaagaatttagtagtatcatgactaaaaggttcgagatgtctatgatgggcgagttgaccttcttcctcgggctacaagtgaagcaagcactagagggcaccttcatctctcaaaccaagtacgtgaaagacatactcaagaagtttgggatggaggatgccaaacctatcaagacgcccatgcctactaatggacacctagacctcgaccataatggtaaatgtgtagaccaaaaggtatatcgctccatgataggatctttgctttacttatgtgcatctcgtctcgacatcatgcttagtgtttgcatgtgtgcccgttttcaagcggagcctaaagagtgccatttgattgccgtcaagagaattctaagatatttagttcacactcctaatcttggcttgtggtatcctaagggttgtggctttgagcttttgggctattccgattcggattatgccgggtgtaaggttgatagaaaaagtacaaccgggacttgtcaattccttgggtggtcccttgtttcttggtcctctaagaagcaaaattccattgccttatcaactgccgaagccgaatatgttgccgccgattcttgttgtgcccaactcctttggatgagacaaaccctaaaagactttggctacaacttcaccaagatcccactcctatgtgataatgagagtgccatcaaaatagccaacaatcccgtccaacactcaagaaccaagcacatagacattcgccaccacttcttgagagatcatgagactaaaggagacatatgccttacccatgtgacaaccgaaagtcaattagccgacattttcaccaagcctttagatgagaaaagattttgcgagctgaggagtgagctcaatatcttagactctcgtaacattaggtgatgggtggttggctaattcatagccaaacatgtgtcactaaaacgtaaattaaaaaaaaattgaggttttgtgtcttgagatcacttcttgtggagaagaaggtcttgataccaggaataaagctcaaacattccctctattatccaaaaaaaaaccttatgtgaaaaattttgtttgtgtttttattgcgaaaatttggtttttatcccttcttgtgatgtatattgaccattgttatgtaatgttgactgttggctggtcatatacatcataagtctccttatgtccataggttttcatttccaaatcattgaattctcatctattccattgaacttgggcctgactgccctctgttctgtcaggctggaagttccggtcaccccagtccggaacttccgggggtcggggggtataaatacccagggggagcctgagcctggtatctctctcctcacttcttcttctccccgattcccaaaccctagccgccgctagagtgctcctctcagcgattttctcttccaacattggaaatttgattcctctccgtggaatcaaccacattggtggctaggaggttcatcccatgatcgatttgcgattttccctctcaaggtagcacttttgatcttctcttttggttcatcatgtttctgcaccgatctctaaatatgtgaacctagggagaaaaccttttggatagaattgttcctgctaccttgtggattgccgatctataggttttttttgtcacatgcactggcctggttaaatcctctgttcttacgttttgctggccggggtgtttttggcccggaacttccggtctctgtccagtcagccagtaaccttgattctaatactgtttcttttaaccattgcactccaaccttgttgattcttgttgcagtagtcattatgcctcgtgagaagagacaaaagctttctcaagatattcctgctgactcgagccccccggttcgtggtcctagggggagattgggcaaagaaaaagttagagattttacagtgggagtcagattccgatccattccaggagggctggtagcattgtcattcgtgatgcaccccgctctccctccccaactgcatctgagtcagatgatggtggcaatgaggatgagccaggttctgaaagcaatcctttgaggctgtacaagacaagggctgttgatcctgatcctaaacgcccaagagtgaactatctgaagaatctactcaagtgtggaaaggacagaatggttagtcctgatactctgccagctgactctcaggatgacagattcaggaccttggtgcaggttgattggtataactctgtgatcatgggaagatctcatccagtggtagagatgaagtggctagactggaagtacatgtcctcaaagaacaacatagtcttcaatgaggtacgcaaggtgtgtgagcacaagcacgcggcagatttgttggccttgcagtattcctggaatgaggaagtgattggacagttctactccactgctttctttggcaccaccaagaaggggcttgattttgtgaagtggaccattcaggggcagcagtatagggtttctatggcacaatttgttgcagctttggggttagatgatgatgacctgagtcgtccacatatctttgtagaggatgctctgtcaccgaccagcactacctttatgtatgagaaggatgctcccaaggattgtttggggactactcgagggttgcatccatattatagagtgctatactctatcttcaggtggtctttgctccccaaagtgggagatgctacagctcttccaggtaggcatgcgctcctcctcagtcgcatgcgctacaacaagcccgatttcagcatcatgaagcttatctggagtgagatctatgagacagtgtgtgagccaaagaggggttgcatctatgctccttatatcatgaagatgattgaggccaagactgggatttgttatttcaaggacaatcaatacaagcctttccgtccacatgctcccactacttcagctactcctaccaccagagtgacaagtgcttccacctcagctgctccttctttctctgctgcacctcagcgttctgagtcttcttctcccataaagaaggctctcaaggctatcttttgcatgtgtgccaagacagctaagaaggtaaagaagatagagaggcgtcaaaaggaagattggattgcagtaggcaaggatgtctctgacatttctgatgatgaggagtttgttgatccttttgctgcttatgagactgctcaagacattggtagtggtgagggtccctctggcacttctcgtttcttcaatgaggagtcctgtcactccgaggagagcagtgatgatgaggagtcagatgcccctaccgagaatgttcctacagatcccgatgaggcagtggacgccgccgggcaagacatcgactctcctcactccggcgacactgagatcattccttctgatggcgatattgatgaggcttga</dnaseqindica> 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| External Link(s) |
