Os06g0543400

From RiceWiki
Revision as of 20:24, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0543400

Description

Similar to CBL-interacting serine/threonine-protein kinase 11 (EC 2.7.1.37) (SOS2-like protein kinase PKS5) (SOS-interacting protein 4) (SNF1- related kinase 3.22)

Version

NM_001064346.1 GI:115468423 GeneID:4341236

Length

1884 bp

Definition

Oryza sativa Japonica Group Os06g0543400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21367391..21369274

Sequence Coding Region

21367653..21369197

Expression

GEO Profiles:Os06g0543400

Genome Context

<gbrowseImage1> name=NC_008399:21367391..21369274 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:21367391..21369274 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttccgatccatggggacggggacggggacgaagccgccggcgatgacgacggagcggtacgagttcgggccgctcgtcggcgagggcaacttcgccaaggtgtacctcggccggcacagggccaccggcgaggaggtcgccatcaaggtgatggacaaggagaagctcgtcaggctcggcgccacggagctgatcaagcgggagatcgccgtcatgcagcggctgcgccacccgaacgtcgtccgcatccacgaggtcatggccaacaagcgccgcatctgcgtcgtcatggagtacgtccgcggcggcgcgctctaccgctacttccgcaggggccccagcggcggcgccgccggcctccgggagcacgaggcgcgccggttcttccagcagctcgtctccgccgtcgcctactgccactcccgcggcgtgttccaccgcgacatcaagctggacaacctcctcgtcgacgagcaggggaacctcaaggtcgccgacttcggcctctccgcgctcgccgacatggagcggcgagaggcccacctccagaccgtctgcgggacgccgctgttcctcgcgcccgaggtgttcaagcgccggggctacgacggcgccaaggccgacgtctgggcatgcggcgtcgtcctctacgtgctcctcaccggccgcaagcctttccccgacgagcacgtctccaggctctaccgcctgatcgggcagaaccagttccagtgcccgccgtcgttcagccctgaccttgcccgtctcgtgcgccgcctcctccagcccgaccccgaccgccgcatcaccataccagagatcatggagatgaggtggttcaagaggggattcaaggaggtcacctactacatcgacagcaacgaccgcctccgcagcctcgacggcctcgacggcgagccggagctgtacgactccgacaccgacacgatcgagtcctcgtcgtcgtcggaatctcccaccccggtggccggaacgccccgcggcatgcacacctcggtgtcggcgccggctctgtccgagctcgaccgcatggaggacagcgcgtccctcccgctcccgctcccgctcccgccccggccgcgcatgccgcggcccaagagcctgaacgcgttcgacatcatcgcgtcgtcgccgagcttcgacctgtcggggctgttcgaggagcgcggcgagaggatgcgcttcgtgtccggcgcgccggtggccgacattatcgccaagctgcaggagatcgccgggatggtgagcttcacggcgcggaccaaggactgccaggtgagcatcgaggcgacgcggaacgggcagaagggcgcgctcgccatctccgccaaggtgttcgagctcacgcgggagctcgtcatggtccaggtgtgcaagaaggccggcgacaccgccgagtaccgcaggttctgcgacaacgagctcaaggccggcctgcgcggcctcgtcgtcgacgccctgccgcctccggtggagggcggcggccatggcggcgcggctgctgcggctgaagccgaatga</cdnaseq>

Protein Sequence

<aaseq>MFRSMGTGTGTKPPAMTTERYEFGPLVGEGNFAKVYLGRHRATG EEVAIKVMDKEKLVRLGATELIKREIAVMQRLRHPNVVRIHEVMANKRRICVVMEYVR GGALYRYFRRGPSGGAAGLREHEARRFFQQLVSAVAYCHSRGVFHRDIKLDNLLVDEQ GNLKVADFGLSALADMERREAHLQTVCGTPLFLAPEVFKRRGYDGAKADVWACGVVLY VLLTGRKPFPDEHVSRLYRLIGQNQFQCPPSFSPDLARLVRRLLQPDPDRRITIPEIM EMRWFKRGFKEVTYYIDSNDRLRSLDGLDGEPELYDSDTDTIESSSSSESPTPVAGTP RGMHTSVSAPALSELDRMEDSASLPLPLPLPPRPRMPRPKSLNAFDIIASSPSFDLSG LFEERGERMRFVSGAPVADIIAKLQEIAGMVSFTARTKDCQVSIEATRNGQKGALAIS AKVFELTRELVMVQVCKKAGDTAEYRRFCDNELKAGLRGLVVDALPPPVEGGGHGGAA AAAEAE</aaseq>

Gene Sequence

<dnaseqindica>78..1622#gcctcgatcccccctaacagcagcagaatccgcgtcctctcgccgccgccgccgcccgccgcggcgcgcgtgcgtgcatgttccgatccatggggacggggacggggacgaagccgccggcgatgacgacggagcggtacgagttcgggccgctcgtcggcgagggcaacttcgccaaggtgtacctcggccggcacagggccaccggcgaggaggtcgccatcaaggtgatggacaaggagaagctcgtcaggctcggcgccacggagctgatcaagcgggagatcgccgtcatgcagcggctgcgccacccgaacgtcgtccgcatccacgaggtcatggccaacaagcgccgcatctgcgtcgtcatggagtacgtccgcggcggcgcgctctaccgctacttccgcaggggccccagcggcggcgccgccggcctccgggagcacgaggcgcgccggttcttccagcagctcgtctccgccgtcgcctactgccactcccgcggcgtgttccaccgcgacatcaagctggacaacctcctcgtcgacgagcaggggaacctcaaggtcgccgacttcggcctctccgcgctcgccgacatggagcggcgagaggcccacctccagaccgtctgcgggacgccgctgttcctcgcgcccgaggtgttcaagcgccggggctacgacggcgccaaggccgacgtctgggcatgcggcgtcgtcctctacgtgctcctcaccggccgcaagcctttccccgacgagcacgtctccaggctctaccgcctgatcgggcagaaccagttccagtgcccgccgtcgttcagccctgaccttgcccgtctcgtgcgccgcctcctccagcccgaccccgaccgccgcatcaccataccagagatcatggagatgaggtggttcaagaggggattcaaggaggtcacctactacatcgacagcaacgaccgcctccgcagcctcgacggcctcgacggcgagccggagctgtacgactccgacaccgacacgatcgagtcctcgtcgtcgtcggaatctcccaccccggtggccggaacgccccgcggcatgcacacctcggtgtcggcgccggctctgtccgagctcgaccgcatggaggacagcgcgtccctcccgctcccgctcccgctcccgccccggccgcgcatgccgcggcccaagagcctgaacgcgttcgacatcatcgcgtcgtcgccgagcttcgacctgtcggggctgttcgaggagcgcggcgagaggatgcgcttcgtgtccggcgcgccggtggccgacattatcgccaagctgcaggagatcgccgggatggtgagcttcacggcgcggaccaaggactgccaggtgagcatcgaggcgacgcggaacgggcagaagggcgcgctcgccatctccgccaaggtgttcgagctcacgcgggagctcgtcatggtccaggtgtgcaagaaggccggcgacaccgccgagtaccgcaggttctgcgacaacgagctcaaggccggcctgcgcggcctcgtcgtcgacgccctgccgcctccggtggagggcggcggccatggcggcgcggctgctgcggctgaagccgaatgaatgatggatcagttggctcgaaagaattgatctttcaacaaggattgatcccagtatctttaattgtttttcattttattactcatcattgattagtttattagtctagtttagcatttttgacagtgattgtgtggtggatcctgatgaatgtatcatgtggcactgttgctgtttaattaggctgctaaatgctgctactaataccctgttctcgtagttgtgctcattaaatttgggaaagattgttcattggcaagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0543400, RefSeq:Os06g0543400