Os06g0562600
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os06g0562600 |
|---|---|
| Description |
Similar to T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) |
| Version |
NM_001064411.1 GI:115468553 GeneID:4341310 |
| Length |
4390 bp |
| Definition |
Oryza sativa Japonica Group Os06g0562600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:22475249..22479638 |
| Sequence Coding Region |
22475634..22475804,22476084..22476197,22476270..22476436,22476874..22476976,22477138..22477190 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:22475249..22479638 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:22475249..22479638 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggcgctggccttcgacgagttcggccgccccttcatcatcctgcgtgagcaggagaagaagtcgcggctgcgcggcctcgacgcccagaaggccaacatcgccgccggcaaggccgtcgcccgcatcctccgcacctcgctcggccccaagggcatggacaagatgctccagtcccccgacggcgacgtcaccatcacaaatgatggcgcaacgatcctggagcaaatggatgtggacaaccaaatcgcgaagctgatggtggagctgtcctgcagtcaagactacgagattggggatggtaccactggtgttgtggtcatggctggctctctcctggagcaagccgagaaactgctggaacgcggcattcaccccataaggatcgccgaaggttatgagttggcctcaaggatagcttttgatcaccttgagcacatctcccacaagtttgagtttagtgctaccaatatagagcctctggtgcagacctgcatgacaaccctgtcatcgaaaattgttaaccgttgtaagaggactcttgctgagattgctgtgaaagcggtccttgctgtggctgatttggaaaggaaggatgtaaacttggacttgatcaaagtggaaggtaaggtaggcgggaaactagaggatactgagctagtatatggaatcattgtcgacaaagatatgagccaccctcaaatgccaaagaggattgaggatgctaagattgccatcctgacctgcccatttgagcccccgaagcctaagacaaagcataaggttgacattgatactgtagagaagttccagatgctgcgtgagcaagagcaaaaatactttgatgaaatggttcagaaatgcaaggatgttggagcaaccctagttatttgccaatggggctttgatgatgaagccaatcatctgctgatgcatagaaatttgccagctgtcagatgggttggtggtgttgaattagaattgattgccattgctacaggagggcggattgttccgaggttccaagagttgagtcctgaaaagcttgggaaggctggaatagtcagagagaaatcatttggaacaacaaaagatcgcatgctttacattgaacagtgtgccaactccagagctgtaactatcttcatacgtggtggcaacaaaatgatgattgaggagaccaagcgaagtcttcatgatgctctttgtgttgcaaggaatcttatccgtaataattcaattgtgtatggtggtggttcagcagaaatatcttgctcagttgctgttgaagctgctgcagatcggtacccaggagttgaacagtatgcaatcaggtcatttgctgatgcgttggatgctattccactagccttggccgaaaacagtggtttgtctcctattgatacactgacagcagtaaaatctcaacaagtaaaggagagcaatcctcactgtggcattgactgcaacgatgttgggacaaaccacatgaaggaacaaaatgtttttgaaacactgataggcaagcagcagcagatcttactggcaacccaggtggtgaagatgattctcaagatcgatgatgttatctcgccttctgactattga</cdnaseq> |
| Protein Sequence |
<aaseq>MALAFDEFGRPFIILREQEKKSRLRGLDAQKANIAAGKAVARIL RTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSCSQDYEIGDGT TGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDHLEHISHKFEFSATNIEP LVQTCMTTLSSKIVNRCKRTLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDT ELVYGIIVDKDMSHPQMPKRIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQMLREQ EQKYFDEMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATG GRIVPRFQELSPEKLGKAGIVREKSFGTTKDRMLYIEQCANSRAVTIFIRGGNKMMIE ETKRSLHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADRYPGVEQYAIRSFADA LDAIPLALAENSGLSPIDTLTAVKSQQVKESNPHCGIDCNDVGTNHMKEQNVFETLIG KQQQILLATQVVKMILKIDDVISPSDY</aaseq> |
| Gene Sequence |
<dnaseqindica>3835..4005#3442..3555#3203..3369#2663..2765#2449..2501#2246..2378#1633..1981#813..1131#99..297#ccgccaccgccactccccccccccgcgccgccaccccaccccaccccaccccacgccgtctcctccgatcgccggagaaggaggaggaggcgtcagccatggcgctggccttcgacgagttcggccgccccttcatcatcctgcgtgagcaggagaagaagtcgcggctgcgcggcctcgacgcccagaaggccaacatcgccgccggcaaggccgtcgcccgcatcctccgcacctcgctcggccccaagggcatggacaagatgctccagtcccccgacggcgacgtcaccatcagtaatcatatccacctctctctctctctctctcttctactcttctaggttttaaggctttctgcgcgccttctcggctctgtctcgtcagagatctgggagtgggaggcggctcgctcgccgatggatcggttggccccggggatgacgcagagcgatctgtggattagggttttcggtcgatgcagagatcatgagatctagttgtttcctgtgtgttatatcgaatggcggaattttgtttttatatcgaacgttgtaactcagatttgtttagggtcggatccggtttgcatttttgttctttttattctgctaaaaataccaggctgccattttctctagctacctattgatctcggtccaagggattactagtggtgactggtgtgttaatttggattttgagggtctaggtttatgcattgatttggttatgcagtcgtggatgcaaattgtatctagattccaacattttctgttgcttaatgaacatgttacgttatgaattgtcagcaaatgatggcgcaacgatcctggagcaaatggatgtggacaaccaaatcgcgaagctgatggtggagctgtcctgcagtcaagactacgagattggggatggtaccactggtgttgtggtcatggctggctctctcctggagcaagccgagaaactgctggaacgcggcattcaccccataaggatcgccgaaggttatgagttggcctcaaggatagcttttgatcaccttgagcacatctcccacaagtttgagtttagtgctaccaatatagagcctctggtgcagacctgcatgacaaccctgtcatcgaaaatgtaagtcataagataaatataattttagctagtcttgaactgttcagaaggccacacgattttcttttcttgtttctttttcgaactaagtatattgacctttttttccaagtagtatgctgttgcaaagaattgttatgcctttgccacttttttaggtagtgcaatggttttccttggatcttttcccctttttcttccctaactgccttggcataataagagtaaaagattccactaattctcacactgtcatttgtagtgcatctatattactgccacttgaactcatttccgtcttcaaagcagatctactcctaagaaatatacttgtcataacaataccaaacctgtggttccacttcaagcatggaaggtgtttgtaggagactttttgatctgcctctaaatttatatgctagagctttagaagtatctttcttaggtcagattcacagtgactataacagcttgttgatctttcttactcttattctgcagtgttaaccgttgtaagaggactcttgctgagattgctgtgaaagcggtccttgctgtggctgatttggaaaggaaggatgtaaacttggacttgatcaaagtggaaggtaaggtaggcgggaaactagaggatactgagctagtatatggaatcattgtcgacaaagatatgagccaccctcaaatgccaaagaggattgaggatgctaagattgccatcctgacctgcccatttgagcccccgaagcctaagacaaagcataaggttgacattgatactgtagagaagttccagatgctgcgtgagcaagagcaaaaatactttgatgaaatggttcagaaatgcaaggtaggatcatggttgcatatttacatacattattctctacatttttcaatagttgtattttttttgtttccttggttaatatttcatggttgcacatttatttaattgatcctgatgtgacttgtcaagttaactctcatcttttcccttcatatttccctaagtaccaaactaccataaagtgaatgtattgggtttcactttgctccatatcatgttgtgtgtgtgcttgctaattaattacgtatatttataattttgtaggatgttggagcaaccctagttatttgccaatggggctttgatgatgaagccaatcatctgctgatgcatagaaatttgccagctgtcagatgggttggtggtgttgaattagaattgattgccattgctacaggtatccatacctccatgagaatttgattgacttgtacatacagtgcataacatataaacactgactgcaggagggcggattgttccgaggttccaagagttgagtcctgaaaagcttgggaaggtaaacatactctctccactgatgagaatcaagaaatatgtgtgtttttttatctttgttggtgtgaaaagtgtttaagttatccattatggggattcatgttggcaccattctgaacttgtcttatgatattttcttttgtgcttacttttcctatacaggctggaatagtcagagagaaatcatttggaacaacaaaagatcgcatgctttacattgaacagtgtgccaactccagagctgtaactatcttcatacgtggtggtatgttatttcaattgccaaaggagagtgactgatataattgaatatagtaattgtgcatttaaagcctacattacattataccatatgtggtatcaaatacatatgccacaaatatttcatatgtttagggcaataaactaaaatagcaactgggtcttactaaaatactatttttgacagtacttgtttgcatacttcataggtaggagtaggtttgtaaaatcgatattaaatatcaactgcatcataatatcaacatcatctgagacaactttagataaaatttaaaaaggcagcaaagcagtatggatcacaatgcatggttgtgctcagcatctacttttcaatctcaatcaagtagaaaatcaataatctcttcttaaaaataacctttgcttggagcttgtgcgatgatgaaactatctactttgcaggcaacaaaatgatgattgaggagaccaagcgaagtcttcatgatgctctttgtgttgcaaggaatcttatccgtaataattcaattgtgtatggtggtggttcagcagaaatatcttgctcagttgctgttgaagctgctgcagatcggtacccaggagttgaacaggtaattactggcgtgcgagctatacaaacacatcctatatgtatcctctgattctatcttttttatttgcagtatgcaatcaggtcatttgctgatgcgttggatgctattccactagccttggccgaaaacagtggtttgtctcctattgatacactgacagcagtaaaatctcaacaagtaaaggtatttgttttctgtgatacttttttccgttgttctgtttattagtacagatgtgagcttagttcttgaccatctcatttcttgccgatgccattgcgatgttgatgggccaattgcataccagtctaaataaaatgcactagttttgcatggtcctacaatacactatacgtgcttgattctatgcatgttatattatgattctgagctagttatagtgtttgtactgtattgatgccatttgtatccttaataacataacatttctgaaaacctcaggagagcaatcctcactgtggcattgactgcaacgatgttgggacaaaccacatgaaggaacaaaatgtttttgaaacactgataggcaagcagcagcagatcttactggcaacccaggtggtgaagatgattctcaagatcgatgatgttatctcgccttctgactattgatgatgcttttgaagactatggagtttattgtgctagggccttggcgacaagcacttccagtaggctctacattttctgtcgatcggtttttgattaacatttacgccatgggtttgcttgcttgtgctatttgatgagctatctgtttgtgtgaacttaacttttggtactttgtttttcgcgcccgcactttgtatagcttgagacaatagcacaatccctttgaagctggcctagaagtttgagtagctaccatttgctcttgtgctgctcagattcgtagatgctatataggttgcgcgctgtggtagtatcgtattgtgttctgcatcgtccgcatgtactctacttttcttaatgatcattttgagccatatgaatattt</dnaseqindica> |
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