Os06g0618600
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Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os06g0618600 |
|---|---|
| Description |
RNA polymerase subunit, RPB5/RPB6-like domain containing protein |
| Version |
NM_001064620.1 GI:115468971 GeneID:4341539 |
| Length |
6008 bp |
| Definition |
Oryza sativa Japonica Group Os06g0618600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 6:25710890..25716897 |
| Sequence Coding Region |
25710892..25710951,25711954..25712017,25712222..25712289,25712643..25712889,25713287..25713430 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008399:25710890..25716897 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008399:25710890..25716897 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>tcgattgtattgggtaatggagatcaaaatattgcccctgtaaataccgcagttcaattggaagctcgagtcccattgcagatatgtgtttcacagaaaagtagcaacctactaaatgaagaagtgaactttccactcccaattgagcaaccggatatattttggagggaaaaggacgaagattcagaatggagcaaagcaaatgataatactgatttagaagaaggatatgatagttcaaaggatgaagtttcatctgtttcctcctacaacaaagcaaatccagaaagctccctcaggagctcagtgtcgatgcactccctgtcatcacgtctttccactagtgaaccattgtattctagagaacgccccagtttcccatcttatagtccaattcctcgactatcagtatcagagatttcagatgatcatggtggaggtgtggtgtcacctcaaaggaagctaaatcatttgctgtcagatcatcatccatcaaatggacagatgttttctctagatcctgaccgctcaaatgatgatgctggaccacctctcacaccaaaatatgttgaaccagctggatcagaaggctttatgagaggaagatcgtacaacataagaatagatgaccaagtgttgcttcgcttctcaccaaagaattctgactcaacttattactttggtgatatgattggtggagcactcaccttctttcatggatctggaacacgaagatgcctagaggtatctgttaccttggaaacatcagaaacggttaatcctcgtgtaatacatccttcgagaaggagctcaccctcaataaccaaggtacacagtgagcactatgaagttgttgcggatcttcaccagacaagctttctcttttcagttccaattgatggaccaatgtcattttccacttcaaaagtttctgtgcaatggtctcttcgatttgagttcttcacaactcccgaaggaattgattcatctaggtatgaacatccacttctcgtcgagaaaagagagaagggtgactgggtgcttccaataactgtttatgcacctccattgcgtaggcaagcaattcatggaagaaatgatagatctgtcttagttgggaaccttttcaactcttga</cdnaseq> |
| Protein Sequence |
<aaseq>SIVLGNGDQNIAPVNTAVQLEARVPLQICVSQKSSNLLNEEVNF PLPIEQPDIFWREKDEDSEWSKANDNTDLEEGYDSSKDEVSSVSSYNKANPESSLRSS VSMHSLSSRLSTSEPLYSRERPSFPSYSPIPRLSVSEISDDHGGGVVSPQRKLNHLLS DHHPSNGQMFSLDPDRSNDDAGPPLTPKYVEPAGSEGFMRGRSYNIRIDDQVLLRFSP KNSDSTYYFGDMIGGALTFFHGSGTRRCLEVSVTLETSETVNPRVIHPSRRSSPSITK VHSEHYEVVADLHQTSFLFSVPIDGPMSFSTSKVSVQWSLRFEFFTTPEGIDSSRYEH PLLVEKREKGDWVLPITVYAPPLRRQAIHGRNDRSVLVGNLFNS</aaseq> |
| Gene Sequence |
<dnaseqindica>3..62#1065..1128#1333..1400#1754..2000#2398..2541#2671..2777#2862..2915#2987..3070#4214..4377#4769..4913#gatcgattgtattgggtaatggagatcaaaatattgcccctgtaaataccgcagttcaattggtgagttccatgctcgttttctgtacgtccattccagccttaaaattgttctccttaagctttcattatctctgcttaattgtggaaattttgatctagtgatcaatttgtgtgttctttgccgaagttactatcaactattgaagctgtgacttgtgttgaagaacttgtctgaggacatacttagtagatgtgctagttagacatcaagttggatcctcaatctaagtattctaggtagagaattagcagtaccttgtttggtataaataccattcaaaactactaggatatcatttgtctcttttagtgccttgttctttctcaatctagaatgagattacaattctatgtatttctcgtatcagcctaagcgctgaatacgtgggttgtcatcaaattgtgcctgcagccctcatttgatatgttaaaaatagatgcatgtgctcaatgcttgcattaaatttcttttgagtaggttttggttggtgcgattgtctgtgttggctttgcaggccctaaatgctcgattttagctcagtatcaaacccatatcttggtagtaatgtcattacgttagtatttatgtggactaccaaggatcaatatgatttttgtgttgtctgtgcttaagacatttgtttcagtttcatgcgttcagtcttcattcttgttcttgttaagttttcttatcagacaagtttagaggcttagagcatgataaaatacacacgtttagagttggttcttctagctctttgcaaccacctcttaaagtgttgcgtcagtgtttttttaagctacatttgaggttatcagtgcttgtgtatgattacaatttactattgtattggaaaccacctgatgccacctcttcattttatttttataatcatgaactcaatctgaatttgcctatccgtgtttctggcatttcatataagtgcaattgtgtaaatactctaccttggagtaagactaaaatcaacatggttattgcaggaagctcgagtcccattgcagatatgtgtttcacagaaaagtagcaacctactaaatgaagaaggtcagtggtgtgtatttaccaacttgaggtgctgaaacttcactaactgtttgtgaatgtgtactgactgaaaaatcatgatacaataatatttcatatgttcttatttctaatgatgcttactccactccatttttgtgtgtatgctcattgagcttgctattctgttgggatacatagctgaccatgttgtgcctgtcccagtgaactttccactcccaattgagcaaccggatatattttggagggaaaaggacgaagattcagaatgggtgggtccttatataagctgttttgcacctcccatatttcacaatactaaattatttcttgatccttttcttacacattttcttacatgagttggcaaatattttcgttactttgatgaagtacagcagcattttgcaaagaaatgcatcatagtttgttaagcataaaagatgaaagcattcataaatcttgaactattttccaacagatgatattttgcatctatgcatacaaagtaattctagtaatcctcatctgaaccattgagtctaacgattaacgtgcatcagtatacatgcacttgatttatcgctctttgcacttatgttgacacatcgaattgtttttgcagagcaaagcaaatgataatactgatttagaagaaggatatgatagttcaaaggatgaagtttcatctgtttcctcctacaacaaagcaaatccagaaagctccctcaggagctcagtgtcgatgcactccctgtcatcacgtctttccactagtgaaccattgtattctagagaacgccccagtttcccatcttatagtccaattcctcgactatcagtatcagagatttcagatgatcatggtggaggtaaggtggagtatttatttttttgacgtgaatttttgaattgttcaagaggtacaaatcaacaatattcttaaggaaatattaaatatagtctcaagttttttttccctatgtgattctttatcagtctcttcctagtgattaatctgcccttcagctcttgtcatacttttagtaatgttcgtgattgtaatatttatgtccggtggattttccttttacaaattgatcatatttgtggtgcatctcatagcatttgttttgctattcctaaaaccacagctttgacgtgattttgccatttgcaaatacaaaattctgatagagcatttgtataagatatccttattctagttcatgatggtcgtttaatttaatcgatcaatggcacaagcaggtgtggtgtcacctcaaaggaagctaaatcatttgctgtcagatcatcatccatcaaatggacagatgttttctctagatcctgaccgctcaaatgatgatgctggaccacctctcacaccaaaatatgttgaaccagctggatgtaagccatcctcacatactgtttcagatctggagttactatatctcgctattctctttattataggtttacataacatgtagtcaatattgatttgcagtactaagttgccattacaattttttgcagcagaaggctttatgagaggaagatcgtacaacataagaatagatgaccaagtgttgcttcgcttctcaccaaagaattctgactcaacttattactttggtgatatggtattgtctgatttgattacatgtgtaaccgcattatcaatgttagaaacttataactgattatctcagttcttctaattgcagattggtggagcactcaccttctttcatggatctggaacacgaagatgcctagaggtaaaaggttgagttgagtaaaatgtgtattggagtgggatttcatattgggaatgttttggtacttgcaggtatctgttaccttggaaacatcagaaacggttaatcctcgtgtaatacatccttcgagaaggagctcaccctcaataaccaaggtatattttctgcactagtgttctggaccactttgatattatgtaccaacatctggtcaatggtttatttgtgtagcttgagcaattctttagtccgattaatagtttgtacggaatcagtttgaacttctgttcttacctacataaagtatttactttgattccaatgatgtagttattttcctcaagcctcagccatttatatacaattacaatatactgatgcgatctgacatacacactagtgttcacaacctcataaaaccaatcttatgttggttagctacaaggatgaccatgaatcagataacaataacatctgcacaatttttgttgttagttcatgacactgcttccatcctttttccccgtgtaaacatatggggtaagcatctgttggaaggaggtgggagagctgataagctactctaatgaaggacccctaccttttcttttctttttttctttttaccgtggggaaggagtgtcgggagtacaatcactggccaagggagaccacaatgggactttagggattaggaacttgtttactcatctttgctcgactaaagaaggtgcaatgcccttctgtggtgatgactctacctaggaaatgtagaaatagtctttagaaaacacatggagtacattagtagtaaagcttccaaaagaaaaaataacctaacctttggaaaaacaaactacctgtgcatgaacagcaattgcagcaaacagtaactatggaacaataagcatgatggacaatgccattcgaacagtagggatgtgcttaacacttttatttgtcgaggaaagggcatgtgctaattgccctcaaacacaaaatattagtcatggccatcaagaatctataagcacctctgagtcttagacttttacctgctattgataaatctagtgcattctagtaacatgccaatatcaaatgttgtgtattctgctagcttctttttcaccaaaaagaccaccttttgtctttatgtacttacactgtttgctttcgacgggaagcagggttactttgcttgccttttggtctaaaaaacatttagtcatttacactgtaaaatcagcaaattgattttaatgattcactcatttttctctggactctctgcaaaggtacacagtgagcactatgaagttgttgcggatcttcaccagacaagctttctcttttcagttccaattgatggaccaatgtcattttccacttcaaaagtttctgtgcaatggtctcttcgatttgagttcttcacaactcccgaaggaattgattcatctaggtatgtaacagtattaacaattttatgtgctgtagcctgatagcattatcttggacaccgtgtctcttaacagcgcagggttggattgctaagtaggccacgagttgtttcgtaccttctgtgctgtttccataatttacatcaatagtagaatgattccttcatagaaataggagatatgttttatgctcatcgtccttagatgtgcatagcaatacacaagctataatcaccacagctacaattagtttcttcagaactatgctaattattggtgttaagcaatttgtttcaaccattatctggtactgccatactgggaaagggtgatcttttctagtctgctgctgttagttttgaatcagcaattctggtttctctcttttggcaggtatgaacatccacttctcgtcgagaaaagagagaagggtgactgggtgcttccaataactgtttatgcacctccattgcgtaggcaagcaattcatggaagaaatgatagatctgtcttagttgggaaccttttcaactcttgaaggtatgcagccttcttgcatatgcctgtcttttcacctgtcctgctagggatttacatctcggttatgaaagagaacacaatagagactgagatttctggtttccgtggtagcagaagtctctgatcgataatcacccaaaacactcaaataaactttgaactttttgtgacatgaataatatttttgcgatacatttgatttaaaggttaaaatgtagattccatataatctataaacaaaacctattttagcaaaaagaatccaaatttgaactgaaatcactgagaaatccggttgctggctgagaccttttcagctggccatgccttttctttggacaaaattggcgtttcctgaagctggaaagggaaaactaagtttcttttaaataagaatacagaagtaatttttattgtttcaatgaaggcaaaagtaatctcactataagctgttataggatggagtagtataaatttgataggctgaatttctttcctcttggcacctatctataattcaatcaaactatttattttgcttattcatctatttttgtaccaatattcaaccaactgctatggtagttttatttctttagttgatgaacattggggatctgaatatcttaccctgttgccttcaagctcagatgtgcatacaaggttctgctgttcttttcaaaacccctaccagttttgcttccgatgagcttcgacgagtattctctgtagttcactttgcacagctggccagttccatacctctaaaatacatgggagatccggaacacataaagcgagaacaaacttgtgttagatcaagtgtgcaaatcacagagttcgtcacctgagaacaggcagctgtgccttgatgtaacatcggcactgcttgattaccttgatgtactataggcattcctttgatagagggacaaaacttttggggtgcttgattagctgttataccccttttcattcggtatgtgtatacgtgagacatctgccttgtaattcaattcttttgtggaaaccaaacatatagcagtacgctggttgtccagaatccagattacacacgtcctgtttctgagac</dnaseqindica> 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