Os09g0516200
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os09g0516200 |
|---|---|
| Description |
Transcription factor RF2a. Splice isoform 2 |
| Version |
NM_001070205.1 GI:115480152 GeneID:4347578 |
| Length |
4236 bp |
| Definition |
Oryza sativa Japonica Group Os09g0516200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 9:20748050..20752285 |
| Sequence Coding Region |
20748356..20748720,20749160..20749244,20750795..20750927,20751372..20751558,20751595..20751931 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008402:20748050..20752285 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008402:20748050..20752285 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaacagggagaaatccccgatcccgggagacggcggcgacgggttgccgccgcaggccacccgccgggcgggccctccggcggcggcggcggcggcggagtacgacatcagccgcatgccggatttcccgacgaggaaccccggccacaggcgcgcccactccgagatcctgagcctccccgaggacctcgacctgtgcgcggccggcggcggcgacgggccgtcgctgtcggacgagaacgacgaggagctcttctccatgttcctcgacgtggagaagctgaacagcacgtgcggggcgtcgtcggaggcggaggcggagtcgtcgtccgccgccgcccatggagcgaggccgaagcaccagcacagcctgtccatggatgagtcgatgtcgatcaaggctgaggagctcgtcggggcgtcgcccgggacggaggggatgtcgtcggcggaggccaagaaggccgtgtccgcggccaagctcgccgagcttgctctcgtcgatcccaagagggcgaaaaggatttgggctaacagacaatctgcggcaagatcaaaggaaaggaaaatgcgatatattgctgaacttgagcgcaaggtgcaaaccctgcaaacagaagcaacaacactgtcagcccagttggcactgctacagagagataccagtgggctaactactgagaatagtgaactgaagctacgtctgcagaccatggagcagcaagtccacttgcaagatgctttgaatgacaccctgaagtctgaggttcagcggcttaaggttgcaaccggtcaaatggcgaatggtggagggatgatgatgaacttcggtggcatgccacaccaattcggaggcaaccagcagatgttccagaacaaccaggccatgcaatctatgctggcagcacaccagctgcaacagctccagcttcatcctcaggctcagcagcagcaggtgctgcaccctcagcatcagcagcagcagccattgcaccctctacaagcgcagcagctccagcaggcggcacgagacctcaagatgaaatcgccgatgggcggccagagccagtggggagatggcaagtcaggaagcagcggcaactga</cdnaseq> |
| Protein Sequence |
<aaseq>MNREKSPIPGDGGDGLPPQATRRAGPPAAAAAAEYDISRMPDFP TRNPGHRRAHSEILSLPEDLDLCAAGGGDGPSLSDENDEELFSMFLDVEKLNSTCGAS SEAEAESSSAAAHGARPKHQHSLSMDESMSIKAEELVGASPGTEGMSSAEAKKAVSAA KLAELALVDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLALL QRDTSGLTTENSELKLRLQTMEQQVHLQDALNDTLKSEVQRLKVATGQMANGGGMMMN FGGMPHQFGGNQQMFQNNQAMQSMLAAHQLQQLQLHPQAQQQQVLHPQHQQQQPLHPL QAQQLQQAARDLKMKSPMGGQSQWGDGKSGSSGN</aaseq> |
| Gene Sequence |
<dnaseqindica>3566..3930#3042..3126#1359..1491#728..914#355..691#ttttactgtccccatgcagacaatgccaaagggataaacagagctaaaattggtgaaaattcactcgaatccaaatgtaaacaacccatttttctcctgttccaatcccatccattccattccattccttctccctgtgctcggattcctgttcttgcagctgatccctagatcttcctctttgcccgagaattttccgcccaattccccactccgattcctcttctttcgcccaaattttggctcaacatttcgcagcgcaatctcgagctgaatcttggggggtaaagctttgcttcttggaatcttggtgcggtttttgggggagatttgcgagcgtttggagccgagaagatgaacagggagaaatccccgatcccgggagacggcggcgacgggttgccgccgcaggccacccgccgggcgggccctccggcggcggcggcggcggcggagtacgacatcagccgcatgccggatttcccgacgaggaaccccggccacaggcgcgcccactccgagatcctgagcctccccgaggacctcgacctgtgcgcggccggcggcggcgacgggccgtcgctgtcggacgagaacgacgaggagctcttctccatgttcctcgacgtggagaagctgaacagcacgtgcggggcgtcgtcggaggcggaggcggagtcgtcgtccgccggcgccgcggcggcggtggcggcggcggccgccgccgccgcccatggagcgaggccgaagcaccagcacagcctgtccatggatgagtcgatgtcgatcaaggctgaggagctcgtcggggcgtcgcccgggacggaggggatgtcgtcggcggaggccaagaaggccgtgtccgcggccaagctcgccgagcttgctctcgtcgatcccaagagggcgaaaaggtgtcatctttttttacattagctttctgtttgttcttgtgaaaatttgttattttacagtaggcgattttttcttgttagttttgttgtattagtctagatttgtttttgaaatgtattcgtagtttgtttaattacatgtctcatagcaaatgttgcattgcctgtgcgaatttcttgtggggggtgattattaccttagggaagaaactctgtaagtatgtatcagtgcaaaaaaataatttctcaagagtcgttttagagagtaaattgtgtgaaaagaaagatagatcttggcaagtggggaagagtttaaaaggaacctgattccctattactgccaccatctgtcgccttgaaaatcaagtgatttcgtgtcatgcattgacgcacatgatatcatgcctatgctgattctgattcgtgatatggaacatctggtaggatttgggctaacagacaatctgcggcaagatcaaaggaaaggaaaatgcgatatattgctgaacttgagcgcaaggtgcaaaccctgcaaacagaagcaacaacactgtcagcccagttggcactgctacaggtatacactgttgctctgatttccccctttatagtcttttgcaggatcattttggatggtttgaagaaattagacctgtctaagtagcatgggtgttaaaactacactttggtctctttcagaccattattattttgttgcgaagaccatttaagttttagaaaaggattaaacaatccttatgtttattattataagaaatctatttgatggccctttgctgcatggtggcctggtggcttcctgcaggtcactctgtcacggggatgttttgtaatattaaaatagttattttttctaggaaaaccatttgaagaacaatattggcacaagtacatcgcaagtgacattgttatattgacacatgatgatataatattagtttaagcatcatgttgtattctacaagatgcactatctcatctccttgtgcctgcggtgcaaagctaataatgaagttccactgtactttatgtcatttgtgtccttggtgggtgggatatgggggagagtgacacaatcattttcttctagttggtatcctagtcactgggcccagacaggatcgatgttttgaaaaaaaaagggtctattatgggttatggcccggtccatcttgaaccagtggaagcccggttggtctgggtgggtttattgcaggataaggaggcttaaccctcacgtctgtacaggtaatagaaaaaaaatgttttaagccagatttggaacctgagggattaagaatgaagtaacctgcgctatccagctaaatgcaatggctggtggtgtccactggtgaaaactgaaataaactaattatggtttgagggattactatttaataattggccattactagtttagaatacacgatattatcaaaacaaagctcataaattgtattgcattctcatcaatccaacttcagttacatatttcaacagcagtcatagcagcaatctttagtccctagctagttggggtaagctagggatgaaaacttagtcgaacactcgagccacatgaaccaaaagattttttttgaaagaaaaataaattgtgctgtttcgttagaaaagactgttctacaagactgtgtgtggcggtctgttaatatctgatcatgtcattctaaatgaattactaatgatgcaaatacgtgtgcacattatgcgcatatgaaagctggagctagcaattgaatgaagtttatattgtgctggtcagacctgtatcatggtcattgatgcattcattccatcaaagcatgaaaccattgtctaacaaggaacaaatgcactcaccttctatccataattaatatttctggaataggcatggaaattaattcaataaactggcgttacatatctgcagagtatgaccttaacagaacagttttacaaactctgcatttatctagagctttgttccctatccatggatacagataatgcatccacatacttaactttttggatgctcaatttttgtttaaaccatgaatttggatggcctaatgatttttgcacgttattttgtcatgacagagagataccagtgggctaactactgagaatagtgaactgaagctacgtctgcagaccatggagcagcaagtccacttgcaagatggtaatattcatatatttgatccctagttctgccaaattttagcctttacggttttctgtgattaggcctactgccttaatattaatatttgtaagatctttgtttatgcatatattggaagttgccttagtaaaatctgtcacctataatctaagcacctgtataagaggaagtttataatttctcaatgataacaaaatatttttagttcatatagtggtttttttcctccttttggcctcttctttgtatttatgttatttagtgctcaatacaatacaacattgtcgtcctcaaaactaaaaacaaccttgtcatcacctttcatgataatggcgtgcaagagaatttataggggagttgctgttttgttacttacatttggttaatcctgatgttttgctgttttgttacttacatttggttattcctgatgtagctttgaatgacaccctgaagtctgaggttcagcggcttaaggttgcaaccggtcaaatggcgaatggtggagggatgatgatgaacttcggtggcatgccacaccaattcggaggcaaccagcagatgttccagaacaaccaggccatgcaatctatgctggcagcacaccagctgcaacagctccagcttcatcctcaggctcagcagcagcaggtgctgcaccctcagcatcagcagcagcagccattgcaccctctacaagcgcagcagctccagcaggcggcacgagacctcaagatgaaatcgccgatgggcggccagagccagtggggagatggcaagtcaggaagcagcggcaactgatgcgtcatttacaaatttacaaaaaaattccccaaagtttcggtgtaaggttgtggtttaacaaccatggagatggtctgtttcattgagatgatgatgatgtgcaagagtagttatcatcatcatcatcggtaggttcaggttggcttcagcttcagtcatacagttgggtggatgttcagttgaagagtttatctgtagctggttcagtaaggaaatggtcgaataatcaagaattccaggttaaaatctttcgtttctttggtaaggtagcacatcaccaagatgtactgttgtagtgttgtc</dnaseqindica> |
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