Os06g0678700

From RiceWiki
Revision as of 20:27, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0678700

Description

Hypothetical protein

Version

NM_001064899.1 GI:115469529 GeneID:4341846

Length

7582 bp

Definition

Oryza sativa Japonica Group Os06g0678700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29103614..29111195

Sequence Coding Region

29103629..29104037,29105462..29105515,29106560..29106776,29107457..29107777,29108061..29108237
,29108498..29108702,29109472..29109535,29110752..29110906

Expression

GEO Profiles:Os06g0678700

Genome Context

<gbrowseImage1> name=NC_008399:29103614..29111195 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29103614..29111195 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacatcgtgcggggcgtcgccgatctcctccgcaaggcgccggcgccgccgcccgcgccgcccgcggtgccctcctcctccttcggcgtccgcgagggctccttccatggtgccgaccaggacgtcgctccctctccccgcgtcgtcttcagtgatagcacggaggagagagtcttaaatacactatggaagaagtatgagaatgccctcaataaggctgaaaaggagaaatccctgcaaatttttgtcttacaatttgtacaaacattcagagattggggaccataccataatattcatttggttgatcaagaacaaggatctgatgaaacagttgtaggatgctctcacgggcatccttctgaggtcattcttatcctgattcaggagatgtctataataacatcaactattgcagaaataggtggcaacagtccagaatcttctccgaactattcagagcaaccaggagatctgggattaagtactgaacggctacatgttttggagtgcttgacaattttgactcgttccatgcataactgtagagtatttagctattatggtggtgtaaagaaggttacttctctactaaaagctgcagttgctcagctcaaaatccagaacagtttgcttgctgcagataaccacgtctcatgccaagctgtagaaaatataaaaatgatgctaaatatgctcaaatacatagttacaataatttccaacttcatgaaattggagccaactatcctgaggattccccattttctcaattccactaagtgtgcctcatcaaaaaatcatttggccacagttactccaagcacttcagaaagtggtatttttgatacacttcaacgttggcaacaaagggctattgttcttgtgatgggagctggtggtgtcaattcgttagtagaacttttgcgggtcattcagagactgaattcggagcagtggacagatctttcacttcattttatcacattatgcactttgcgatcaactatatctggaacccgtgcccagaatcatgttagaagcattggtggtttggaaattctacttgatgggctaggactcccttcaagtaaattttcagttttgaagaattcatctatcccaaaagatgaaagggttgaagttcttctgctccaaatattatatttggaaattctaagtgaggcagtatttggaaatgtcaacaatctgcaatttttgtgcgaaaatggacgtgtacacaaatttgcaaactgcatttgttggcctgcatttatgattctggagttccatcggcaaagggataacaccgggccttcacttgcattagattcgatttctggcccaatttattttcttgatataaccgaatggagggagtactctgtaaagttgagcaatgcactttgctcttttattattccttcaaaggttataagttactgtcgtaatgaaattgcttgcaacaaaatctctttatctatcccatcagcataccgagagcaatctgtgagatggttcataagggttcttatgacagtcttcctatgcatcaaagcttgtactagtgaaactgaattgccaaaccatataaagtaa</cdnaseq>

Protein Sequence

<aaseq>MNIVRGVADLLRKAPAPPPAPPAVPSSSFGVREGSFHGADQDVA PSPRVVFSDSTEERVLNTLWKKYENALNKAEKEKSLQIFVLQFVQTFRDWGPYHNIHL VDQEQGSDETVVGCSHGHPSEVILILIQEMSIITSTIAEIGGNSPESSPNYSEQPGDL GLSTERLHVLECLTILTRSMHNCRVFSYYGGVKKVTSLLKAAVAQLKIQNSLLAADNH VSCQAVENIKMMLNMLKYIVTIISNFMKLEPTILRIPHFLNSTKCASSKNHLATVTPS TSESGIFDTLQRWQQRAIVLVMGAGGVNSLVELLRVIQRLNSEQWTDLSLHFITLCTL RSTISGTRAQNHVRSIGGLEILLDGLGLPSSKFSVLKNSSIPKDERVEVLLLQILYLE ILSEAVFGNVNNLQFLCENGRVHKFANCICWPAFMILEFHRQRDNTGPSLALDSISGP IYFLDITEWREYSVKLSNALCSFIIPSKVISYCRNEIACNKISLSIPSAYREQSVRWF IRVLMTVFLCIKACTSETELPNHIK</aaseq>

Gene Sequence

<dnaseqindica>7159..7567#5681..5734#4420..4636#3419..3739#2959..3135#2494..2698#1661..1724#290..444#tcgctttccactctcctcccccacttccatttcgcggctaaacataggcgattaggagagcgagctcgacgcacgcgcgcaatcacacacccacgaaaattttcgatccacgcgatttccccattcgctcccgaatcgaggccgcatttttttcgatcgaatttggggttcggatcgaataatcctgtaggttttgctcacctcttcgatcgtcatctccggcgagccggtggcggtggtgatggtgatggtgcgtggctaggcgcgcgtggcgtggtggtcggaggccatgaacatcgtgcggggcgtcgccgatctcctccgcaaggcgccggcgccgccgcccgcgccgcccgcggtgccctcctcctccttcggcgtccgcgagggctccttccatggtgccgaccaggacgtcgctccctctccccgcgtcgtcttcaggtactcgatcacatccgctcgctcgctcgctttccgccctgggagaaatgtggcttgtttgtttgtgcgggcgctagggcttgcgtgcctgtgccgtgtcgttgtttctgaatttcggatgggatttgcggtgattatgtggcgagagagaaaaatgtgcatgtaatttttggggaaagttgtcgatgtattgcaagcacattgctagtagtccctagattagcctgagttatttacccgcaaggattcagagcgtgtttcagtgctagttagtaatacataatattctgatatgtttagtttagctttgccatgccacgtccattccctgcaaaataattcaaaatggttgtacatatgatttatgttgatgcgtgcaaccatggaatgagagttcatgctaaatcatgatatgaaacaaacctttggatggctggcttcaaggacaaccagccaattagcttttaagtgaagcttccgtcctcaaaaccaattatagcaggtgttcagctatcccattccaatgccaagacgaggacatggaccgcctccttctcgagcttccatgccctcttgcaagcttcacttccaaatacccggtcctcccactctgcatcaacaagcccatcaaatctgacctctagcctctggttgacagggtggtcagaagcctgccaacatggaaagccgagcagctatcgccaccagggagaagcgcaagaagcctttgctagattagtcgcaaaaccgtctcgtgagatatagccctgttctgtaactttttcttttccttttgctcagcagctgtacgaactcctcacttaatacaatgatcagcaaatcctatgcatattcttgaaagccaaataaacaactaaaaatagtatggctggggtgcattgtattgtttaaacttcttttcttatttggtaggtagcatatgtgctcaatggaatgatgctatgtggcttatagcaatgctaaaacgtcatcctatgtcattatcactaacacaattgctatattcttgttagacaggctctcaactataacatctgaggttccattattttatttgttagtggtacttaatatgttaattttcctggggtatggtaattgtgtggtgtataaataaaacctgtaatcaaatctcaattttttttgtgtgctacgtctgcacaaatgtttctcattatgtttcattttgttgcagtgatagcacggaggagagagtcttaaatacactatggaagaagtatgagaatgccctcaataaggtatttccctgaaagcttgctagattctgttctaggatatttgtttatcattaggacctcacctgtacaacagtttcaagtgtctgcttgatgtctccaactttcaagcattcttcacttttaattaaaaccactcgtaaactgtttcacactaaatattcatgtttctcaatgtacaattttatattcttaagaatgtaagggcctgtttggcagggctccaactcctaaatttaactctaagagctgggtctggagtggagttgtggagcagcctgaacccagctcctaaatttagttcattttgtgagagcactctagtctgctccactcacttttaaggtggggctgaaactgtttggctggactctagctccaggagaggtagagttggagctggagctatgccaaacaggccctaaaattaaactgtataagtgtggtaaccaaactgtttactaaatgctacttcctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatttatctaaattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagtattaggtgcttttagagaatattcaataactgtctatctttatgttgtatgatttgttaaccagtttttatttaatacgccgttagaactaaattgaaataacatagtaatgctgtactatatcttacgtcactttgtaatcatttacaggctgaaaaggagaaatccctgcaaatttttgtcttacaatttgtacaaacattcagagattggggaccataccataatattcatttggttgatcaagaacaaggatctgatgaaacagttgtaggatgctctcacgggcatccttctgaggtcattcttatcctgattcaggagatgtctataataacatcaactattgcagaaagtaagtggctttactgtataatgagtaccctactgttagaactgtctccggtttctctttgatgcgtgttttttttgctcagaactttttcttgtggtgtgtgtgactatgtagattcccgaattaccattctatgcccatagaaatatcttcaaatgttctattgattcttgaggatggtaccaatgtttcaagtggaatagcttttggtggctgctttgataaataataagattacaattgttcttgtattgaattagtaggtggcaacagtccagaatcttctccgaactattcagagcaaccaggagatctgggattaagtactgaacggctacatgttttggagtgcttgacaattttgactcgttccatgcataactgtagagtatttagctattatggtggtgtaaagaaggttacttctctactaaaaggtaaaaattcttcacgtgttgaaagctcaattctaggaaatattctttgtatgtgctggattatttttccaggcttcttattctgctctattttaaacagattttttccttctttcccttgctcaacggtggcattctttttcttattctgctctaatttaaatagttttcttattctgctctaatttaaatagttacatttttttagttagcttagtcatggtttgttgacttctcgttttgaggaattatattctcactcctttctctttggtatattcagctgcagttgctcagctcaaaatccagaacagtttgcttgctgcagataaccacgtctcatgccaagctgtagaaaatataaaaatgatgctaaatatgctcaaatacatagttacaataatttccaacttcatgaaattggagccaactatcctgaggattccccattttctcaattccactaagtgtgcctcatcaaaaaatcatttggccacagttactccaagcacttcagaaagtggtatttttgatacacttcaacgttggcaacaaagggctattgttcttgtgatgggagctggtggtgtcaattcgttagtaggtaaggctgccattttagttgtgaactgatattgctgctatagtttttcaattttgttttacaaactgttatttgaacactcaatccgttataatgttaattaatgcagtggtacttactgggttatcaaaatctcaaatgaaatagtgtatctagtatagtcaggttaattttcatgttttcttttttgtaatttctgaccaacgaatcatgtgaagtatcaaacagaagacaacaatgaacaatagctgttagaatgattgtagtatttaggaattttaaacgaaagaggtgactaggaagaatagcatgcctggtaggaaatcttgatgtcatgggaggggatattaatgccaaaaggaattacagaatgcctgcataattcagagattaagttggctattttttagtagaagaaattaaaatgtaagagttgaaattttgttttaatttacagagcaacaaatgaagtcattgagtgtatgtgtgctgctaagaaggcatcagaattctgttgtcacactatatgtaaatacctcgtcatatgcaccacagttcagaggcagtgcatgtgagaagatatttgctagtagatccacctgtagctaacatgtcactatattgactattattgattttttataattttgttagtttttataaatttagtttcactgcagaacttttgcgggtcattcagagactgaattcggagcagtggacagatctttcacttcattttatcacattatgcactttgcgatcaactatatctggaacccgtgcccagaatcatgttagaagcattggtggtttggaaattctacttgatgggctaggactcccttcaagtaaattttcagttttgaagaattcatctatcccaaaagatgaaaggtgcaaattttagaacccgggagcacttcttgtttatcatttgatacttccgtttccatttttcgttagtgtgccttatgcctagaaataggatcacatatattctcgatagaatttgttagggaagactgacaattttctagaccaaagataaaattatggcataacatccaacacgatacaaacaattgctttgaattttatttcgaatttgaaggtctggaaatggatttaaatatgaatttttcactctaagaatgattcaaatctaaaatctaaatcataaaaagatatatttgttcaaatttgaaatgcatgcaagacataatttagtttttaaaaaaaggttcggcaatttcagaattatattctaatgatttaaattgcagttagattttttaaacaaatttttgagcagaatgctttgagtgtgaaacatatagttgcaccttttttacacacacattcctccttttcaataccttggtaaggggtggtaattaggagggaattccccctttactttgcctaaacaaatctcagccatctgttttcattaatgacctaatctccaactaaactccctatcaatttctaccatctctaccaagcaagatgctgggattaaaaatcaaattcccatcttaatctcaccatcaattccctcgtgtaaacttccaatctccttctttcgaattgccaaacaagccgattaggttatggatttggctgttgcttgtttaataacgcataaagtctattataaattaaattaattttcagcctttaggcactttcaaaagacttgtgattagtgaaaagcgttttttttcctttttaaatttgccattgtatttttcagtgacaaccttctagattagtaattcagatatactccctctgttcttttttatatgattttggtttgttcattttttaactaaccaacgtcatatatttatggatggaggtagtataattttagttctcaccttccatattttcttctcaattttatgttctgatgttactttgcttttgtagggttgaagttcttctgctccaaatattatatttggaaattctaagtgaggcagtgtatcctgtactctaaactttatttattggtttttcaatttctgaatatcaatatcctgtgctattctttaatttaagtaagattcttggtcatatgactgggactaactgatttactagttattaactccagcttataatgaatttgaagaattaatgtgcatttaaattaaaggcaaaatttgttataggacaccgaaagattgcggcctttgctgtgagacatccgaagatcgtgtatttgctcgtggacaccgtaaaaaagtggtaattagctggcggacaccggctgcattattttattatttcgggtggaaatggagagagaaactttggttaaagacaagtttgcccatgggcccacttgtcaatctctctctctctcttcttcttcctctctttgtctgttcatctctttctcattgcgccgccgccgagctctgccgtggccatgaagcagcatcagcagcaggaggctacggcctgttcatcagaacagcagattgttccatggctgaagcacaacaagaagtcgcagcagcagcgaaagggtactggtcttctccctcctcgccgtcgtcgatgtcccccactccgtcacctccaccggcggcagctgtccatggaggcggaggaagagcggaggagtccaccatcgccgccgctgcaacgccagccgcacggagtttggctgcaggggacaacggcatgcaggtgagtggccatggcgagcatgctgggttgagctccgggcggcgtcgtggccggcaaaaaggatccgggcggcgccagatccttgccaatctaggtcagtacatcgccgtccacccgcgtgcgcactcgccatggccagcggcagtggcgctggcgccggccttccactcgaagagctagggcttgacggtgctgtactcgacgcgctctggcgatgcgccgccgccgccgccccgccaccgtcgcgcctctgctccgctgcgaggaagaaggggaaaagaaaagaagagagagagaggaagccgtgcgccgggatgccgccatgcgtcgtcaccgtcggcggtgaaccctggcgatgcgccgctgccgccgccccgctgtggccgccgtcgcgcctctgctccgctgcgaggaagaaggggaaaagaaaagaagagagagaggaagaacagtgtcaaagggttattttggtacttacacaactctttctctctccatttcaaccgaaaataataaaataatgggaggagtgtccagcagctaattaccacttttttacagtgttcacgagcaaatacacgtttttgggtgtctcacagcaaaggccacaatctttcggtgtcctgtagcaaattttgcctaaattaaatttatgtatcatatactgctatcgtttttttccccaagttggattcttgactgctattcagatttggaaatgtcaacaatctgcaatttttgtgcgaaaatggacgtgtacacaaatttgcaaactgcatttgttggcctgcatttatgattctggagttccatcggcaaagggataacaccgggccttcacttgcattagattcgatttctggcccaatttattttcttgatataaccgaatggagggagtactctgtaaagttgagcaatgcactttgctcttttattattccttcaaaggttataagttactgtcgtaatgaaattgcttgcaacaaaatctctttatctatcccatcagcataccgagagcaatctgtgagatggttcataagggttcttatgacagtcttcctatgcatcaaagcttgtactagtgaaactgaattgccaaaccatataaagtaagtttgctttttatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0678700, RefSeq:Os06g0678700