Os06g0712800

From RiceWiki
Revision as of 20:29, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0712800

Description

Similar to Ankyrin-like protein

Version

NM_001065096.1 GI:115469923 GeneID:4342048

Length

3653 bp

Definition

Oryza sativa Japonica Group Os06g0712800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31060261..31063913

Sequence Coding Region

31060731..31060939,31061037..31061685,31061775..31062397,31063565..31063727

Expression

GEO Profiles:Os06g0712800

Genome Context

<gbrowseImage1> name=NC_008399:31060261..31063913 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31060261..31063913 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccatggcgccgacgaggaggagaccaagagcgccgtcgcggccatggacgacgcccagcgacgcgaggaggatggcagcgtgtcatccagcgaggccaacgccgaagaggaggaggcggcggcgacgactggagcgcgccgcgtccgcgtcggggaggacgaggaagaagccgcgcgagaagagagccaagagctgcacctgcagatgccgaggaggagcagatcgatcatggcgtcgacggcggcgcgagcttgcgccgtgaagcgcaggaggaagggcagatcggtgaagggtacgtgatggcggatcacggcgaaggcgaggagatgctgctcgagcagcagcagcagcaaccggaggaggagcgtggcggcgatgcagaggcggcgcgcacgtcggagtccgacgccggcggcgaggtcgacccggaggacaagccaaccgtgtcagagcggacggaggagatggtcgacacgctccccggcgaggaagaccgcgcggaggtgtccgccaccggcgtcgacgagcagaacgcgtgggcgacgcaagccgatcactcccaccaggagaaagaccggcgcgacgaggcggctggcgtcgacgacaacatcgccgacgccaccgccggcggcggcggcggcggcgaggagccggagtggcggctgtgcaacgtgaaggccgggccggactacatcccatgcctggacaacgacaaggccatcaagaagctgcggccggagaactaccggcggtacgagcaccgcgagcggcattgccccgacgagggcccgacgtgcctcgtccccctccccgccggctaccgccgccccatcgagtggcccaagagccgagacagggtttggtacagcaatgtgccgcacacgaagctggtggaggtgaaggggcaccagaactgggtgaaggtgagcgggcagtatctgacgttccccggcggcgggacgcagttcatccatggcgcgctgcactacatcgacttcctgcagcagtcggcgcgggggatcgcttgggggaagcggacgcgggtggtgctcgacgtcggctgcggcgtggcgagcttcggcggctacctgttcgaccgcgacgtggtggccatgtcgttcgcgcccaaggacgagcacgaggcgcaggtgcagatggcgctggagcgcggcatcccggccatctccgccgtcatggggtccaagcgcctccccttccccagcaaggtgttcgacctcgtccactgcgcgcggtgccgcgtcccgtggcacgccgacggcggcgccctcctcctcgagctcaaccgcgtcctccgacccggcggcttcttcgtctggtcggcgacgcccgtgtaccagaagctcaccgaggacgtccagatctggaaggccatgaccgcgctcaccaagtccatgtgctgggagctcgtcgccatcaagaaggaccgcctcaacggcatcggcgccgccttctaccgcaagccgacccgttgtgatgatctccagcgaccggcgcgcggcgtggccatctcatctcaggatggcaaagcagcactccccaacacaagattagatagaactcttctcctcttttcttttcttctttttttttgtcttttttttgtctgcttctttgattggtag</cdnaseq>

Protein Sequence

<aaseq>PWRRRGGDQERRRGHGRRPATRGGWQRVIQRGQRRRGGGGGDDW SAPRPRRGGRGRSRARREPRAAPADAEEEQIDHGVDGGASLRREAQEEGQIGEGYVMA DHGEGEEMLLEQQQQQPEEERGGDAEAARTSESDAGGEVDPEDKPTVSERTEEMVDTL PGEEDRAEVSATGVDEQNAWATQADHSHQEKDRRDEAAGVDDNIADATAGGGGGGEEP EWRLCNVKAGPDYIPCLDNDKAIKKLRPENYRRYEHRERHCPDEGPTCLVPLPAGYRR PIEWPKSRDRVWYSNVPHTKLVEVKGHQNWVKVSGQYLTFPGGGTQFIHGALHYIDFL QQSARGIAWGKRTRVVLDVGCGVASFGGYLFDRDVVAMSFAPKDEHEAQVQMALERGI PAISAVMGSKRLPFPSKVFDLVHCARCRVPWHADGGALLLELNRVLRPGGFFVWSATP VYQKLTEDVQIWKAMTALTKSMCWELVAIKKDRLNGIGAAFYRKPTRCDDLQRPARGV AISSQDGKAALPNTRLDRTLLLFSFLLFFCLFFVCFFDW</aaseq>

Gene Sequence

<dnaseqindica>471..679#777..1425#1515..2137#3305..3467#gtccttgtccgatcaatggcggggcttggccggagctcgcgcggcgcctccgggaagcgcggcgccgcgtcctcctcctcctcctcgtcggtgtcctcctcctccgccgccgcctccgcgtgcgtctactacgccaccacggccgtgctcgtcacgctctgcgtcgccggcgcctacttcctcacgtccgcctcgtcggcgtcgcttgcgggctctgtcgtcgatggcgacggcggcggcggcggcggcggcggcggcaccgtcacgacgacgtaccggcacaccacgcgctcgtcgttcgcgtacgaggtcagtaggcccgagaggaaggcgcccccggcgccgccgcgcgatgtcgagcgggtcgatgacgcggcggcggcgcgggggagaatcgctgacgaggagggcgccgaggaggagcacggcgatggcgacgacgacccgcgtgggaagcccgatcttgatgaccatggcgccgacgaggaggagaccaagagcgccgtcgcggccatggacgacgcccagcgacgcgaggaggatggcagcgtgtcatccagcgaggccaacgccgaagaggaggaggcggcggcgacgactggagcgcgccgcgtccgcgtcggggaggacgaggaagaagccgcgcgagaagagagccaagagctgcacctgcagatgccgctaggagagtctcgccctcgcgccgccgccgccgtggaggagaagagcttggacggcggcgtcgaggaggagagcaacgccgggcagcggcagcgcgaggaggagcagatcgatcatggcgtcgacggcggcgcgagcttgcgccgtgaagcgcaggaggaagggcagatcggtgaagggtacgtgatggcggatcacggcgaaggcgaggagatgctgctcgagcagcagcagcagcaaccggaggaggagcgtggcggcgatgcagaggcggcgcgcacgtcggagtccgacgccggcggcgaggtcgacccggaggacaagccaaccgtgtcagagcggacggaggagatggtcgacacgctccccggcgaggaagaccgcgcggaggtgtccgccaccggcgtcgacgagcagaacgcgtgggcgacgcaagccgatcactcccaccaggagaaagaccggcgcgacgaggcggctggcgtcgacgacaacatcgccgacgccaccgccggcggcggcggcggcggcgaggagccggagtggcggctgtgcaacgtgaaggccgggccggactacatcccatgcctggacaacgacaaggccatcaagaagctgcggccggagaactaccggcggtacgagcaccgcgagcggcattgccccgacgagggcccgacgtgcctcgtccccctccccgccggctaccgccgccccatcgagtggcccaagagccgagacagggtatgcacgccacctgttcgatcgccatccattgcttaattacacattttgctgctgcttcgtgtcatgtcaatggcggcggcgtgcaggtttggtacagcaatgtgccgcacacgaagctggtggaggtgaaggggcaccagaactgggtgaaggtgagcgggcagtatctgacgttccccggcggcgggacgcagttcatccatggcgcgctgcactacatcgacttcctgcagcagtcggcgcgggggatcgcttgggggaagcggacgcgggtggtgctcgacgtcggctgcggcgtggcgagcttcggcggctacctgttcgaccgcgacgtggtggccatgtcgttcgcgcccaaggacgagcacgaggcgcaggtgcagatggcgctggagcgcggcatcccggccatctccgccgtcatggggtccaagcgcctccccttccccagcaaggtgttcgacctcgtccactgcgcgcggtgccgcgtcccgtggcacgccgacggcggcgccctcctcctcgagctcaaccgcgtcctccgacccggcggcttcttcgtctggtcggcgacgcccgtgtaccagaagctcaccgaggacgtccagatctggaaggccatgaccgcgctcaccaagtccatgtgctgggagctcgtcgccatcaagaaggaccgcctcaacggcatcggcgccgccttctaccgcaagccgacctccaacgagtgctacgagacgcggcggcggcagcagcctccgatgtgcagcgacgacgacgacgccgacgtcgcgtggtacatccgcctcaacgcctgcatgcaccgcgtccccgtcgccccgtccgaccgcggcgtcgcgtggccggcggagtggccgcggcggctgcgcgcgccgccgcactggctcaacgcctcccgcgccggcgtgtacggcaagccggcgccggaggacttcgccgtggactacgaccactggcgccgcgtcgtcgacaggtcgtacctcaacggcctcggcatcgactggtccagggtcaggaacgtcatggacatgagagccacctacggagggtaggtcacaccatcgccattgctgactttggtcaaactgttttatatttgactaaatttatagaaaaaaatattttcaatctaaaataaatttattataaaaatatatttaattattgatttaataaaactaacttaatattataaatattactatatttgactataaacttacttagaatagtttaattttaaccaaagttaaaacgtcttataacttataacttgaaatataacttgaaaggctcaaacggtggtagtacttaccacgaagaagaagactatgctgacctctccttgtcaggttcgcggcggccatgagagaccacaagatctgggtgatgaacgtcgtcaatgtcgacgcggcggacacgctgccgatcatcttcgagcgagggctgatcgggatgtaccatgactggtgcgagtcattcagcacctacccgaggacatacgacctcctgcacgccgaccgcctcttctccaagatcaaggagaggtcagccgccattgatgctcccttcgatcgatcttctcctatctttgctttcgccttcgccatggccggcgatcgatcgagaaatgttttttggtatctttgtgttcaggtgcgccgtgctgccggtggtggtggaggtggacaggatcgtgaggccggggggcagcatcgtcgtgcgcgacgactccggcgccgtcggcgaggtggagaggctgctgaggtcgctccactgggacgtgcggctcaccttctccaagaacggcgaggcgctgctctacgccgagaagtcggattggcggccggagttgctcgccgacccgttgtgatgatctccagcgaccggcgcgcggcgtggccatctcatctcaggatggcaaagcagcactccccaacacaagattagatagaactcttctcctcttttcttttcttctttttttttgtcttttttttgtctgcttctttgattggtagcacttgacatagttctgtagtggttattatcctacaaacacaaataatgcagccatcagcaacaacaatggtagtatatgcatggttttgtcactgttctagtatagtatgtgtaccttctgagcactaacacaaaagtacagaactgagatgtctgatggcttgggctctgttggtagtttcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0712800, RefSeq:Os06g0712800