Os06g0725100

From RiceWiki
Revision as of 20:29, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os06g0725100

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001065154.1 GI:115470039 GeneID:4342107

Length

2126 bp

Definition

Oryza sativa Japonica Group Os06g0725100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31705275..31707400

Sequence Coding Region

31705543..31706019,31706360..31706611,31706711..31706841,31706940..31707225

Expression

GEO Profiles:Os06g0725100

Genome Context

<gbrowseImage1> name=NC_008399:31705275..31707400 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31705275..31707400 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgggcatgaagaagaagagtgtgggcttaggtcgtcttagcctgatgatatccatggttcaggtgttgggggccgtcggcggcggcggcgtccatccgagcaagatgcggctggtgccggcggtgtacgtgttgggcgactcgacgctggacgtcggcaacaacaaccacctgccggggaaagacgtccctagggccaacaagccctactacggcatcgacttccctggctccaagcccaccggacgcttcagcaacggcttcaacgccgccgactacgttgcaaagaatctgggtttcgacaagagccctccggcctatctggtactcaaagcacgcaactatctcgtcccggccgctctagtgatgggtgtcaactatgcttctgccggagctgggattctcgactccactaacaccggacgcagcattccactgtcgaagcaggtggtgtacttgaactcgacgagggcggagatggtggcgaaggcggggtccggcgcggtgagcgacctgctggccaagtccttcttcctcttcggcgtcggcagcaacgacatgttcgccttcgccgccgcgcagcagaagctcaaccgctccgcgacacccagcgaggtggaggccttctacacaagcctcatctccaactactcggcggctatcacggagctgtacgggatgggcgcgaggaagtttgggatcatcaacgttgggccggtggggtgcgtgccgagcgtgcgcgtggcgaacgcgacgggcggctgcaacgacggcatgaaccagctcgccgccggcttcgacgcggcgctccgcggccacatgtccggcctcgccgcgcggctgccggggctcgcctactccatcgccgactcgtacgcgctcacgcagctgaccttcgccgacccgggcgccgccggctacgcgaacgccgacagcgcgtgctgcggcggcgggaggctgggcgcggaggggccctgccagcgcggcgcggcgctgtgcggcgaccgcgaccggttcgtgttctgggacagcgtgcacccgtcgcagcaggccaacaagctcggcgccaaggcctacttccacggccctccccagttcacctcccccatcaacttcaaccagctcgccaattacaacagctga</cdnaseq>

Protein Sequence

<aaseq>MVGMKKKSVGLGRLSLMISMVQVLGAVGGGGVHPSKMRLVPAVY VLGDSTLDVGNNNHLPGKDVPRANKPYYGIDFPGSKPTGRFSNGFNAADYVAKNLGFD KSPPAYLVLKARNYLVPAALVMGVNYASAGAGILDSTNTGRSIPLSKQVVYLNSTRAE MVAKAGSGAVSDLLAKSFFLFGVGSNDMFAFAAAQQKLNRSATPSEVEAFYTSLISNY SAAITELYGMGARKFGIINVGPVGCVPSVRVANATGGCNDGMNQLAAGFDAALRGHMS GLAARLPGLAYSIADSYALTQLTFADPGAAGYANADSACCGGGRLGAEGPCQRGAALC GDRDRFVFWDSVHPSQQANKLGAKAYFHGPPQFTSPINFNQLANYNS</aaseq>

Gene Sequence

<dnaseqindica>1382..1858#790..1041#560..690#176..461#atcacacacacaccatctcaattctcaacctttagtagtacaagatcgatctaaacagcctgcataggtcgacctagccttactgcaggctgctcgatcgtcgtagctaattaattgtgatcgagagaattaacgaatacttagagttattagagaccagttaagagtggtaggcatggtgggcatgaagaagaagagtgtgggcttaggtcgtcttagcctgatgatatccatggttcaggtgttgggggccgtcggcggcggcggcgtccatccgagcaagatgcggctggtgccggcggtgtacgtgttgggcgactcgacgctggacgtcggcaacaacaaccacctgccggggaaagacgtccctagggccaacaagccctactacggcatcgacttccctggctccaagcccaccggacgcttcagcaacggcttcaacgccgccgactacgttggtacgtactttacttaattatcgtatatatatactcgtatttatataggcaacattactaactcgatcgagatattaattaattacatgggcttgcagcaaagaatctgggtttcgacaagagccctccggcctatctggtactcaaagcacgcaactatctcgtcccggccgctctagtgatgggtgtcaactatgcttctgccggagctgggattctcgactccactgtaagtgatcactagctactacaggttaccatgaaaattaaatttatcagtggtctgtacttaatctatgtcgatctgcttgtgtctgaattattgcagaacaccggacgcagcattccactgtcgaagcaggtggtgtacttgaactcgacgagggcggagatggtggcgaaggcggggtccggcgcggtgagcgacctgctggccaagtccttcttcctcttcggcgtcggcagcaacgacatgttcgccttcgccgccgcgcagcagaagctcaaccgctccgcgacacccagcgaggtggaggccttctacacaagcctcatctccaactactcggcggctatcacggtatgtagtttacacacacctaacccaaccatcctcaactatctagctcatggataaattaattaatgtactaacatattaacaattagtccggacatttcctttcctggtgtcgtaagtactactactactctcaatttgttcaaagtctcctgcagccggctatatactatatagaaagacatgatatataggaagaacaattcaatgatcatcttggtaattatatacttatatattaatcatcagtacgcgtgatacatgtaatgatgcatatccatatcaactaattaagctagctaattgctaattgatgaattgtgttggtgtacgtgtgcaggagctgtacgggatgggcgcgaggaagtttgggatcatcaacgttgggccggtggggtgcgtgccgagcgtgcgcgtggcgaacgcgacgggcggctgcaacgacggcatgaaccagctcgccgccggcttcgacgcggcgctccgcggccacatgtccggcctcgccgcgcggctgccggggctcgcctactccatcgccgactcgtacgcgctcacgcagctgaccttcgccgacccgggcgccgccggctacgcgaacgccgacagcgcgtgctgcggcggcgggaggctgggcgcggaggggccctgccagcgcggcgcggcgctgtgcggcgaccgcgaccggttcgtgttctgggacagcgtgcacccgtcgcagcaggccaacaagctcggcgccaaggcctacttccacggccctccccagttcacctcccccatcaacttcaaccagctcgccaattacaacagctgatgctcatttatttatatatattgcttctcatcgatgatatatatacgtggtcactgatgttctttctttctttcatgtttttttcctagttttagtcttggaatttcagttaaattgattcatcattcatgtatatactgctgtacaatatatacatgttgctctattcagctcggtttgattatgagtactgcaaatggaagtgtaataatcgatccatcgtggctagaggccagaaaaataatgataaaattgatgtgcttcactt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0725100, RefSeq:Os06g0725100