Os05g0100500
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os05g0100500 |
|---|---|
| Description |
Paired amphipathic helix protein Sin3a |
| Version |
NM_001060908.1 GI:115461546 GeneID:4337520 |
| Length |
2441 bp |
| Definition |
Oryza sativa Japonica Group Os05g0100500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:22609..25049 |
| Sequence Coding Region |
22609..22733,22932..23223,23629..23796,23876..23974,24072..24243 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:22609..25049 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:22609..25049 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgaaggcagcgcccacggcgtctcagcacctcaagcgtcctaacctcgcccgatccgatccgtcgcccatgccggcgcccgcgcccgcgcccgccccctcgcagcaggggcaggggccctcccagaaccagaagctcaccaccaatgacgcgcttctctacctcaaggccgtcaaggataagttccaggacaagcgcgacaagtacgatgagttcctcgaggtcatgcgcgatttcaagagcggcaggatcgacaccgctggcgtcatcatccgtgtcaagaccctcttcaatggccaccacgagctcatccttggcttcaacgccttcttgcccaagggatttgccatcaagctccaggacctggagaagaagcctgttgacttcatggaggccatcaatttcgtcaacaagatcaaggctcgcttccagcaggaggaccacgtctacaagtccttcttaggcatcctcaacatgtaccgcttgcataacaagtccatccaagatgtttacggggaggttgcagcgctcttccgtgactatcccgatttactcgaggagttcaagcatttcttgcctgatacgtcaaccgctccagaaccggtaactgttcctagaggtgtttcaagcagacacgacgacaggggcccactaatgccctcggcaaggaacgcgcagatcattaagagggagagggcttatccatcaactgtcgatcgtgacttcagtattgatcgccctgatcctgaggatgatccccacagaaggcgtgttgacaagggaagggatggtaaggttgatcgcagtagaaaagattatgaaacggacgtgaaagacgttgaatatgacagcaaagatttggatggaggacaacgtaagcgcaaactagcaaggaagatggatggtgctcttgctgacacacaacaaggtggggttagcacctctacttcaccatacgacgataaggatgcattgaagagtgcatacacaaaggagttccgtttttgtgagaaagtaaaggagaagctagagcctgaagcttaccaggagtttttgaaatgccttcacatatacagccaggaaataattacaaggagtgaattg</cdnaseq> |
| Protein Sequence |
<aaseq>MKAAPTASQHLKRPNLARSDPSPMPAPAPAPAPSQQGQGPSQNQ KLTTNDALLYLKAVKDKFQDKRDKYDEFLEVMRDFKSGRIDTAGVIIRVKTLFNGHHE LILGFNAFLPKGFAIKLQDLEKKPVDFMEAINFVNKIKARFQQEDHVYKSFLGILNMY RLHNKSIQDVYGEVAALFRDYPDLLEEFKHFLPDTSTAPEPVTVPRGVSSRHDDRGPL MPSARNAQIIKRERAYPSTVDRDFSIDRPDPEDDPHRRRVDKGRDGKVDRSRKDYETD VKDVEYDSKDLDGGQRKRKLARKMDGALADTQQGGVSTSTSPYDDKDALKSAYTKEFR FCEKVKEKLEPEAYQEFLKCLHIYSQEIITRSEL</aaseq> |
| Gene Sequence |
<dnaseqindica>2317..2441#1827..2118#1254..1421#1076..1174#807..978#536..718#340..404#tgatcaacaaaaacacaaaaaaggggaaggcaggcagggcaggcgaggcgatcgaaggaagaggtttcatcatttcactccatttcccctgtttcttcttcttcttctgttcgtctctcgagggctcttcttcttcttcaatatactactagttggccttcctccctaacaagcaaggaaggaaggaagggagaaaggcgatcgatcctctactctagccaggatactcgtataggagtagttaggaggaggatagaagttagggtttgcggtcgggcagatccaggcggccgtggccataagggaatccgtctgccttggtcggtggatgggtgggtgatgaaggcagcgcccacggcgtctcagcacctcaagcgtcctaacctcgcccgatccgatccgtcgtaagtgtcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttgtttgcgagggagcgagcgcgcggtgtatgccggccgatgcaacaatcctaacccttatcatcgcctgcctcgtcaaggcccatgccggcgcccgcgcccgcgcccgccccctcgcagcaggggcaggggccctcccagaaccagaagctcaccaccaatgacgcgcttctctacctcaaggccgtcaaggataagttccaggacaagcgcgacaagtacgatgagttcctcgaggtcatgcgcgatttcaagagcggcaggtcccttccctccccctccccctcgctttcatttccacccattccttcccctattaacacacaccacacgagggacatgattttgcaggatcgacaccgctggcgtcatcatccgtgtcaagaccctcttcaatggccaccacgagctcatccttggcttcaacgccttcttgcccaagggatttgccatcaagctccaggacctggagaagaagcctgttgacttcatggaggccatcaatttcgtcaacaagatcaaggtctccacatcctcctctttctcgccccgccccgccccaccccttcaaccaaataaaacgaaccttctactacttacccgccacccatccgctgcaggctcgcttccagcaggaggaccacgtctacaagtccttcttaggcatcctcaacatgtaccgcttgcataacaagtccatccaagatgtttacggggaggtacgtaccttgcctcggcgcttgtgtatacgcctttttgaagaattctgtcttaccggctctctccttttgtcgttaggttgcagcgctcttccgtgactatcccgatttactcgaggagttcaagcatttcttgcctgatacgtcaaccgctccagaaccggtaactgttcctagaggtgtttcaagcagacacgacgacaggggcccactaatgccctcggcaaggaacgcgcagatcattaaggtaaatcttgaaacggacatcttgttacccgtgttaaattgcatatactttagagaatgtttccttatacgttgacaagtttatatgacatcagctttaggataagtactgcagagaacgtaatgcggcgtaatgtaaactaccttgacaagtttatatgacatcacatcatctttaggataagtactgaaacatttaattgacattagctccatgattcggggacatggatatagaatatcagagatccgctgaaacgcactggcatcggacatgaaagctactttctgtactaggatcatttttctgaatctactttttgttagacacaagttctatattttactagctatatttggtcacaaaagaacatctatggtgaaatgttgttttatccatctccagagggagagggcttatccatcaactgtcgatcgtgacttcagtattgatcgccctgatcctgaggatgatccccacagaaggcgtgttgacaagggaagggatggtaaggttgatcgcagtagaaaagattatgaaacggacgtgaaagacgttgaatatgacagcaaagatttggatggaggacaacgtaagcgcaaactagcaaggaagatggatggtgctcttgctgacacacaacaaggtggggttagcacctctacttcaccatacgacgataaggatgcattgaagagtgagtcttaatgtcatcttgtgtgaatatgtgtgcaatatggcatcttcagtgccttgcaggctcctattttccgttaactttaggatccatcttgtgttttcctccatcttagtgtatttcattaatatgtaagtaaagaaatgccttgcctctttgatgtactggattattttcttatttcttattcaaattaaggtgcatacacaaaggagttccgtttttgtgagaaagtaaaggagaagctagagcctgaagcttaccaggagtttttgaaatgccttcacatatacagccaggaaataattacaaggagtgaattg</dnaseqindica> |
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