Os05g0106100

From RiceWiki
Revision as of 20:02, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0106100

Description

Similar to Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) (V- ATPase 16 kDa proteolipid subunit) (Fragment)

Version

NM_001060951.1 GI:115461632 GeneID:4337563

Length

2009 bp

Definition

Oryza sativa Japonica Group Os05g0106100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:304176..306184

Sequence Coding Region

304428..304560,305639..305924,306003..306084

Expression

GEO Profiles:Os05g0106100

Genome Context

<gbrowseImage1> name=NC_008398:304176..306184 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:304176..306184 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcctcctccaccttcagcggcgatgagaccgcccctttcttcggcttcctcggcgccgcctccgccctcgtattctcctgcatgggcgccgcctacggcaccgccaagagcggcgtgggcgtggcgtccatgggggtgatgcgcccggaactggtgatgaagtccatcgtccccgtcgtcatggccggagtgctcggtatctacggcctcatcatcgccgtcatcatctccaccggcatcaaccccaaggccaagccctacttcctcttcgacggttacgcccacctctcctccggtctcgcctgcggcctcgccggtctcgccgccggcatggccatcggcatcgtcggcgacgccggagtcagggccaatgcgcagcagccaaagttgttcgtgggcatgatcctcatccttatctttgcagaagctcttgctctgtatggcctgattgttggtatcatcctctcgtctcgtgcgggccaatctcgagcggattag</cdnaseq>

Protein Sequence

<aaseq>MSSSTFSGDETAPFFGFLGAASALVFSCMGAAYGTAKSGVGVAS MGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLA CGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA GQSRAD</aaseq>

Gene Sequence

<dnaseqindica>1625..1757#261..546#101..182#aggcaacgagatacggcaccaataccaatctctgactcctccggcctccggcggccggcgagagagatcccaccctcaccgacgacggcgagcgaccaccatgtcctcctccaccttcagcggcgatgagaccgcccctttcttcggcttcctcggcgccgcctccgccctcgtattctcctgtaagctcccaatcttccccttcactttctcggggccagatctgatctgagatgaggttgacacacgacgcatgcaaggcatgggcgccgcctacggcaccgccaagagcggcgtgggcgtggcgtccatgggggtgatgcgcccggaactggtgatgaagtccatcgtccccgtcgtcatggccggagtgctcggtatctacggcctcatcatcgccgtcatcatctccaccggcatcaaccccaaggccaagccctacttcctcttcgacggttacgcccacctctcctccggtctcgcctgcggcctcgccggtctcgccgccggcatggccatcggcatcgtcggcgacgccggagtcaggtaccctccctctcattcccctcctcagtcccatctactactactaattacaacaagggagtagttattattattaagctttcaattgctgttagcctgcccacattttactaatccgaatcctgatgactgaactattagagtaatagcatgcgactacattctttgttgattgctagatgctggtggagtctttgatcagaacaagaattcctctctttttttatctgctgaaacttcaaatttacactacaatgttgtgcctcaacctgtacgttggcttataacttcctcaattgggcatcctagcatgcatgacagacaatgggcatgctagtgtttttttttttttttttggataatcaccagaggggagaggttcccccacctgaattttccattgataagaggtcacattacaagggtaattacagggattgggcaagcgacagcattgttgccattacatatcttggcatgctagtgctacattcacaccgaattgtagaatgtcttttagatgtgatttcagactgggtatgggtggttcgtcattcatggttcttcctatggtatcagttcggttgtagctattgaaatattaggctggatattctccacaggagtatatgtgctaggcatctgtcttgggggcactccggaacatgggttgtgtgtcgtaggatcctgataacccttttcgattgcctatttgcctacaagtgaaagttagcttcttttagaaactttactgccccttgaattttgtggataatgattacaagagttacaactcctatcttctatgatttacggtgcaacacccatactgctttgattcatatataccatcgctaccatttaactgttataaagtcaaggaggattcacattgcccctttttacatcagcatatctatgttgtagtcctgagtacagactattgagatctattcaaatcaaactgggatcaagagcaaaatagcagatagagtttctttctatctgttactattgtaagtaaagcactcttgtttgcaggaaattgacatttggttctggtttacctcctctgcagggccaatgcgcagcagccaaagttgttcgtgggcatgatcctcatccttatctttgcagaagctcttgctctgtatggcctgattgttggtatcatcctctcgtctcgtgcgggccaatctcgagcggattagagggttttggaagaacaagacacggttcaccattgtattctattccaagtgttaatttcttcttatagactgcttggtcttgtctgtgtttatactcattgtctgtattcaagctattgtgggttgttgtatttattatttgaatttttgaagtaataatcggtaccaggccgtccgagatgtgattaataatgaatgaataaataaataagcaaacaaacaagctagacttagttttaagtctgttctgat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0106100, RefSeq:Os05g0106100