Os05g0139100
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0139100 |
|---|---|
| Description |
Basic helix-loop-helix dimerisation region bHLH domain containing protein |
| Version |
NM_001061128.1 GI:115461986 GeneID:4337752 |
| Length |
1767 bp |
| Definition |
Oryza sativa Japonica Group Os05g0139100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:2224943..2226709 |
| Sequence Coding Region |
2224943..2225878,2225961..2226059,2226150..2226215,2226293..2226709 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:2224943..2226709 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:2224943..2226709 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgctacgcgggaacgacaccggcagcgacctggccgagctgctctgggacaacggcgccccggcgccgctcaggccgcctccgcctccgcccttccagcccttcacctgcagcgccgccgccaccacgtcgccgccggcgcacgactacctcttcatcaagaatctcatgcggggcggcggcgccgccaaccaccaccaccacgatgacgatgacgacgacgacgacgacgtgccgtggttgcattaccaccctgtcgtggacgacgacgacgacgccgacgctgacacggcgccgctgcctcccgactactgcgccgccttgctctccggcctctccgaccacctcccgccgcccgccgctgcggcgagcagggtggaccccgacccctgctcctcctcccacggcgccgtcgtcccgtccacgtccgccgccgccgccaagcaggctcgcacgagcggcggcggcggcggcggcgtcatgaacttcaccttcttctcgaggcctctgcagcagcgcccctccggcggcgagaccgcgtcggcgtcggcgtcggcggcggccacctcgaccgtccccgtcgagtcgacggtggtgcaggcggcgacgaaccggctgagaagcaccccgctcttctccgaccagaggatggcatggctgcacccgcccaagccgtcgccacgcgccgccgcaccgccgccgccgccgcctctggcccctaccactcggcaccgactcgacaccgccgccgcgacggcgacggtggcgcagaggttgccgccgtccgaggcaagagctcccgacgcgcccccgcctgccgcgaccgcgacggcgacgacctcgtccgtctgctccggcaacggcgaccggagacagctcaattggagggacagccacaacaaccagtccgccgagtggtcggccagtcaagacgagctggacctcgacgacgagctcgcaggcgtccaccggaggtcggcggcgaggagctccaagcgcagccgcaccgccgaagtccacaacctgtcagagcggaggagaagagaccggatcaacgagaagatgcgggcgctgcaagagctcatcccaaactgcaacaagattgacaaggcgtcgatgctggaggaagccatcgagtacctcaagacgctgcagctgcaggtgcagatgatgtcgatggggacggggatgttcgtgccgccgatgatgctgccggcggcggcggcggcaatgcagcaccaccacatgcagatgcagcagatggccgggccaatggcggcggcggcgcatttcccccacctcggcgccgccgccgccatggggctcgccggcttcggcatgcccgccgccgcgcagttcccttgcccgatgttccccgccgcgccgccgatgtccatgttcgcgccgccgccgccgccgccgccgttccctcacgcggccgccaccgccgtcgagcagacgccgtctccgccgggagcagcagacgccggcaacgcccccgccgtgaagcaggcgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MLRGNDTGSDLAELLWDNGAPAPLRPPPPPPFQPFTCSAAATTS PPAHDYLFIKNLMRGGGAANHHHHDDDDDDDDDVPWLHYHPVVDDDDDADADTAPLPP DYCAALLSGLSDHLPPPAAAASRVDPDPCSSSHGAVVPSTSAAAAKQARTSGGGGGGV MNFTFFSRPLQQRPSGGETASASASAAATSTVPVESTVVQAATNRLRSTPLFSDQRMA WLHPPKPSPRAAAPPPPPPLAPTTRHRLDTAAATATVAQRLPPSEARAPDAPPPAATA TATTSSVCSGNGDRRQLNWRDSHNNQSAEWSASQDELDLDDELAGVHRRSAARSSKRS RTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMS MGTGMFVPPMMLPAAAAAMQHHHMQMQQMAGPMAAAAHFPHLGAAAAMGLAGFGMPAA AQFPCPMFPAAPPMSMFAPPPPPPPFPHAAATAVEQTPSPPGAADAGNAPAVKQA</aaseq> |
| Gene Sequence |
<dnaseqindica>1..936#1019..1117#1208..1273#1351..1767#atgctacgcgggaacgacaccggcagcgacctggccgagctgctctgggacaacggcgccccggcgccgctcaggccgcctccgcctccgcccttccagcccttcacctgcagcgccgccgccaccacgtcgccgccggcgcacgactacctcttcatcaagaatctcatgcggggcggcggcgccgccaaccaccaccaccacgatgacgatgacgacgacgacgacgacgtgccgtggttgcattaccaccctgtcgtggacgacgacgacgacgccgacgctgacacggcgccgctgcctcccgactactgcgccgccttgctctccggcctctccgaccacctcccgccgcccgccgctgcggcgagcagggtggaccccgacccctgctcctcctcccacggcgccgtcgtcccgtccacgtccgccgccgccgccaagcaggctcgcacgagcggcggcggcggcggcggcgtcatgaacttcaccttcttctcgaggcctctgcagcagcgcccctccggcggcgagaccgcgtcggcgtcggcgtcggcggcggccacctcgaccgtccccgtcgagtcgacggtggtgcaggcggcgacgaaccggctgagaagcaccccgctcttctccgaccagaggatggcatggctgcacccgcccaagccgtcgccacgcgccgccgcaccgccgccgccgccgcctctggcccctaccactcggcaccgactcgacaccgccgccgcgacggcgacggtggcgcagaggttgccgccgtccgaggcaagagctcccgacgcgcccccgcctgccgcgaccgcgacggcgacgacctcgtccgtctgctccggcaacggcgaccggagacagctcaattggagggacagccacaacaaccagtccgccgagtggtcggccagtcaagacgaggtaagcaaacaaccacgccgccgccgccgccattgctgctcgcgatcgctcacgcgtacgtcacgtctctccccctctccagctggacctcgacgacgagctcgcaggcgtccaccggaggtcggcggcgaggagctccaagcgcagccgcaccgccgaagtccacaacctgtcagagcgggtaagcacacacaccatgcaccatccacaacacccgcgtcgtgtcatgacgtcatctcatctcgccattgaattgctttcgagctcgcagaggagaagagaccggatcaacgagaagatgcgggcgctgcaagagctcatcccaaactgcaacaaggtaacaaagttcgccatgaatccaaattgagcttggtgaaatgtgacgtcatcatgggaatggaaaatggtttatagattgacaaggcgtcgatgctggaggaagccatcgagtacctcaagacgctgcagctgcaggtgcagatgatgtcgatggggacggggatgttcgtgccgccgatgatgctgccggcggcggcggcggcaatgcagcaccaccacatgcagatgcagcagatggccgggccaatggcggcggcggcgcatttcccccacctcggcgccgccgccgccatggggctcgccggcttcggcatgcccgccgccgcgcagttcccttgcccgatgttccccgccgcgccgccgatgtccatgttcgcgccgccgccgccgccgccgccgttccctcacgcggccgccaccgccgtcgagcagacgccgtctccgccgggagcagcagacgccggcaacgcccccgccgtgaagcaggcgtga</dnaseqindica> |
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