Os05g0146900

From RiceWiki
Revision as of 20:04, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0146900

Description

Peptidase, trypsin-like serine and cysteine domain containing protein

Version

NM_001187287.1 GI:297723704 GeneID:9272414

Length

6347 bp

Definition

Oryza sativa Japonica Group Os05g0146900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2650420..2656766

Sequence Coding Region

2653136..2653330,2653425..2653544,2654265..2654534,2655631..2655782,2656214..2656676

Expression

GEO Profiles:Os05g0146900

Genome Context

<gbrowseImage1> name=NC_008398:2650420..2656766 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2650420..2656766 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcacctgtctctacgggacccagatttaggcggaggaagtctaatgcaccgagggcaacaagtcgaaagccggacagcggggtgcctgtcgctgccgatgccgatgctgcgaaagagggcgatgcgccggggtcggggtcgacgacgagggtgacccgttcgagggcagcaaggtgccggccggggtcgcaggagccccttccaccaccatcggagcgatcccgatcccggaggacgacgctggccactgatacggcagtgagagagcgcaaaaggattcgggccaatctcattgaggaggaaaaaccgctgacgaagatggaggaggtagggggggaggagatctcgtccgcaccgagctctcccctctgtgagccctacttgcctgatgaccaagagattgatttcgacaccattgatctttacaagaagaaatcaaaagaattccataaaaaaagagatggaaatcccttagcacgctgctctggatttctgattgattggaatgaaacaacgaaagttggtgttgttattacatctgctgatattatttgctcagcatcatccttagaccgttggtctggtgatgatgaatattcttattctgctaaggtctttgtgcacctactggacgacaccacggtggaggggcgcttgatttatgctcagacacactacaatcttgctttgttcgagattatagtggaatccccagttcagatacctaattttactttcaacctgaattatgctcaacaaatatttgtgttaggaagggatgagaacttgtgtctaagtataagtcatggcaaagtacaatactgcaatccgtttttgtgtggtcggcatcactacatgtatgttgatactgccacccctaagaggtgtatcccccgccctcaacttggggtcaagctttcagccattaaatttctggaccttcctcatatagagatgatattacgcaagatccatatttgcgatgggctcattgtcgaagaagtgtcatcagggtctactattgagaaactgggagtcagagtcggcgatatcattcagcatttaaatggagaatgggtttctgatacaattcaggtgaaaataattttttgtatggcatttggatactttatgttggcttctgtaacctttttattgattgtattagttagaagaaatgttgctgagactttctga</cdnaseq>

Protein Sequence

<aaseq>MAPVSTGPRFRRRKSNAPRATSRKPDSGVPVAADADAAKEGDAP GSGSTTRVTRSRAARCRPGSQEPLPPPSERSRSRRTTLATDTAVRERKRIRANLIEEE KPLTKMEEVGGEEISSAPSSPLCEPYLPDDQEIDFDTIDLYKKKSKEFHKKRDGNPLA RCSGFLIDWNETTKVGVVITSADIICSASSLDRWSGDDEYSYSAKVFVHLLDDTTVEG RLIYAQTHYNLALFEIIVESPVQIPNFTFNLNYAQQIFVLGRDENLCLSISHGKVQYC NPFLCGRHHYMYVDTATPKRCIPRPQLGVKLSAIKFLDLPHIEMILRKIHICDGLIVE EVSSGSTIEKLGVRVGDIIQHLNGEWVSDTIQVKIIFCMAFGYFMLASVTFLLIVLVR RNVAETF</aaseq>

Gene Sequence

<dnaseqindica>3437..3631#3223..3342#2233..2502#985..1136#91..553#ggcgactctcctaccgtctcagacctagacctcgcaggcggaggcggaggcggaggcggaggcggcggcggcggcggcggcggcagaggtatggcacctgtctctacgggacccagatttaggcggaggaagtctaatgcaccgagggcaacaagtcgaaagccggacagcggggtgcctgtcgctgccgatgccgatgctgcgaaagagggcgatgcgccggggtcggggtcgacgacgagggtgacccgttcgagggcagcaaggtgccggccggggtcgcaggagccccttccaccaccatcggagcgatcccgatcccggaggacgacgctggccactgatacggcagtgagagagcgcaaaaggattcgggccaatctcattgaggaggaaaaaccgctgacgaagatggaggaggtagggggggaggagatctcgtccgcaccgagctctcccctctgtgagccctacttgcctgatgaccaagagattgatttcgacaccattgatctttacaagaagaaatcaaaagaattccataaaaaaagaggtactattcaactccccctttccttatacagtactaccattcaaaactaagcgctatgttcattaaatgtgccatgactcatcatttaatatttaataatgtactaatctagtcatgactcatctcataatgttagctatgatattcaatgatgtagtaagttacaaggtgggagagatgatctatgcattgatgttggtcttattttacagctcatcaacttagctttcctacactgaatacggatgtatcttcttcttgtctgcttcacccaaagttactcgacatccgtgaatctgcaacaaagtcgatacttggtgctgcaaaatatgttctgggtctttcatcttgcattggtacacaatttgtacctcttatttactgctatagaaaatttgctatgtttgataatattacgtatatattcgcagatggaaatcccttagcacgctgctctggatttctgattgattggaatgaaacaacgaaagttggtgttgttattacatctgctgatattatttgctcagcatcatccttagaccgttggtctggtgatgatgaatattcttattctgctaaggtatgttgctgaaggttgagtttatttgttataaagctagggaaaatagaactaagaaaacaccgcctcattcactttggtactaacacaaaagaaatgctatttgtatgcaacatttcataagtcataatgcatgcacataacattgtacacagttctcattcacttcatacatccaatactatatgttgggcacttgggctactatttattgtttttatagagatagtatacttcacgtgaactctctatttcttactaatgttctgagaccagttgggaaggtccatcatactaaaaataagaatgtctgcgatgaccacctcaaccagcataatttggtttccagtggagagctcaagttctttccaacctagaaaattagtccgtcatattgataagacattctcattgcatggtttacttgagtatatatgtagttccacatatttgcttgggaaggaaattgtagaagacaaaaaaaaaacaatgaaatattgtaattcgtttgtgcttcacattgacatcgaaatgctgaacacactgaattttgtgcaaagaggatactattgattgaagcagtctttcctagttcttgttttgttcctagatctgattgagtagtgtagagtgcgaaacaatgcctataaataggatttctaggtggcatgttgatcactaggtttgaggaccagggcattgattgacaacacaaagaacaatgtccagccattgtgtaacatttttatcactcccaaatagggaaatactacctccattccaaaatatagcagcttttggctatgcatctggacaatattttgggatggatgtagttacttatttccttcttagccttattatatttaactcaatctcaaaatcgcttgatgcttcaaatatttccctactatttacggtgcaaagtctctagtatcaatttaaatgctatatatttgaatttgactcttccagaaagcatacgcaacatttagccttttgtctaaaatggtcatgatcatttgttttcggtccttttgtcatgtgttccctagatgatttaataattttatacattttgcaataaatgttttaggtctttgtgcacctactggacgacaccacggtggaggggcgcttgatttatgctcagacacactacaatcttgctttgttcgagattatagtggaatccccagttcagatacctaattttactttcaacctgaattatgctcaacaaatatttgtgttaggaagggatgagaacttgtgtctaagtataagtcatggcaaagtacaatactgcaatccgtttttgtgtggtcggcatcactacatgtatgttgatactgccacccctaaggtatcttcgttttattataatcattttaattttgaactatatggtatacgatttatatcttttaatatagttaatttttgctgtaaatattgtagtgtgccttgggagggctagtcattgactttgaggggagcacggtggggattgcttgtcagacacatgcttttattccctcctcgatacttatcaagtgcttacatctgtggcggaagatccagtgtgttttcttttcatttttctataatattgcgaaaatatttttgttctttttttgttgttattcaaagttggattatagggttgaccttcctagattaagatagatgacctagaagactttttaatgtatgctgtaacagtatcatgtcatgcgaaaacataatgtgtgatttcacttgtattattgtgaaggtatctcttattgataattttatattatttgctgcaaatcaatgaccataagataacttagcaatacagttcttattagtttaatgcttattgtttaaaggaatcatttcaaaattttactaaaagatcatatataaaattatgtagggattatagtcttgggcggacatgattttagaatacatcgtatagctctgttaaactgcttttttatacatattatttaaatttcagtctaaatattttattttacatgctttattctgctttgtacctccttttgaattctaatgaacaattatctggcagaggtgtatcccccgccctcaacttggggtcaagctttcagccattaaatttctggaccttcctcatatagagatgatattacgcaagatccatatttgcgatgggctcattgtcgaagaagtatatagattgtttactattgtagattttgatttacttaagatgtatgcccctgtcatgtagtaattcttatatcaactgaaattaaatataggtgtcatcagggtctactattgagaaactgggagtcagagtcggcgatatcattcagcatttaaatggagaatgggtttctgatacaattcaggtgaaaataattttttgtatggcatttggatactttatgttggcttctgtaacctttttattgattgtattagttagaagaaatgttgctgagactttctgaggatcattttgacaaaggaaatggtctcaattccacattggacattaaagtatgtttattgtttttaactgtgaattgctttctttgtgtctttttgtgtttttttattgaattactcaaatatgagttgattttgtaggttggtttgtttcacatacgcaatggagctcgaaacaccataaatttgacgacagttgtctcagaaaatggagaagttgttaagaggggtataaatatacacaaatatttttttttgtataaatatacacaaatattttttttctattttaatattgaaaagaggatatttgtattgctagtatattttataacaatgatatacacctaagacttgcatatatacttcttttctgtttacaaagatacaagaacatcggcccaaatgtacttgaatgcatactttcatctgtttacagatacataatatttgcctcaataaaccactaaaatagtttattttactgattaggttcattcgctgtttctgtccctactcgggaggagatttctgctatgtacgcacttcaggaagcaactacaggcatgtgaacttttctatatctgtgttaattatgatgtaaaaatgtgcagtgttttttgtcttgcaattctttaagtgtcttagtgccatgtgaggctgttagccatttccctatactcgatgtcttgtgtggcctgtcgatgtcaatgtagtgagctttcatgttgccaatgatttaagttgttgtattcagtaatcttagcaaatgtttctctaaaaaggaatttttttttatatcccttctccatatcctctgatggattttatttttctatgcttgctttggttccaaagattttatactgctaaaacaatagagatgtatcttgccaagtttgtgaaagcctaaggaataaaaccaaaaagttcacaatcctaaacactgtcactttagaattagcctattagtttgcagtaaacatgtaatgtgaataagagttccaaaggcacaacaagtgtttttggaaatttgctagtacaatttacaggagtgaagaataaatcatttttatttcacaaaaaagaatcaaaatatcgccattgtctttttcttttttcagcaaattgtagttagtgtatagatgcttttgtttatcttgttattttggtctcactgcatcatcttcgtatggcccttcaatgtttctggagctctagtgtttcgcaatgtggggactctggcattttctttcctttatttgcaaagtctatcctatgatctgaccttttttacaaaaatggagagaagttgcctttgattgcctgtaacatgtactccgtcgttttcctttatgaccatgtctctgatgtagaacctgacatgtgtagatgcttttgtttatcttgttatcttggtctcactgtcatcatcttcgtatggcccttcaatgtttctggagctctagcgtttcgcaatgtggggactctggcattttctttcctttatttacaaagtctatcctatgatctgaccttttttacaaaaatggagagaagttgcctttgattgcctgtaacatgtactccgtcgttttcctttatgaccatgtctctgatgtagaaccttaacatgtgttgtagctatatctgattgaaacatctcatttggcagtcttttcgatcagcaaagtaatgcctgatgattggagcccttatggtgtctccatttatatcagcagcaaataagatgattaagccaattatattatttgtctctcgtgcatgtatggatattcagtcattttttattttatggcttttatgtttaattctttttttcagatattgttagagttagagtttgtagtactatttacattcaagaatctatcactatcaattccaggaaattaagaggatctggtagacttctaaggcaaagcattaaaaaaatattgacctctttgtattctacgccgctacgcgaaagctatagtatattctgaaagaaatcagaatagtgcaattttagaacataaagtagtagtcatttatgtgtttatttttcaacaacattggtatgatgaccaggaaggttaggagggaatctttgcttgaattgtatgagatgcaatacgttttgctgttattcactttgttgctatctgaacatgtgttaataccttatcttctatgaattgctgataagttgagcattttgttttgctcaaatgctgaaacgttgtattcatttttcaggatctcccatgctcactactgaagagaggaaacccacctaatccataactagaccgggcttcgttttaatctgattcatgctattatcaacttgtacattgatagtctcatcatacgcctgttacctcttctacctctgctattaatatcaacttttttaacaaagatggtctagtacactactggcattttctgttctctcatgcagtttcttggaatgtaacgtttcttttatatccttttgagattcctcaaccatgtagctatagctatgtgtggacatggaaatcatgtccatacaacatgtttatatgcagaaaacttctagctttatagttactttgcaactgggaaggttaaaattatggtatatgctagatgatgtactacgctttgctgcggaatatatgaatgaatgtatgttgaatgtagtaaaaatgatggatggattttggt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0146900, RefSeq:Os05g0146900