Os05g0155300

From RiceWiki
Revision as of 20:04, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0155300

Description

Similar to HIRA interacting protein 5

Version

NM_001061225.1 GI:115462180 GeneID:4337851

Length

3732 bp

Definition

Oryza sativa Japonica Group Os05g0155300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3219390..3223121

Sequence Coding Region

3219454..3219652,3220018..3220179,3221163..3221338,3222215..3222318,3222404..3222515
,3222706..3222771

Expression

GEO Profiles:Os05g0155300

Genome Context

<gbrowseImage1> name=NC_008398:3219390..3223121 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3219390..3223121 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaggcggagggtcgcggcgctcgcgtcccagctcctgcggaggcagctgctcatgcggagacccccgccgcggttcctctcatccgcggcggcggcggcttctggccccctcgaccgcctcaggtcgccgcccttcgcgcgcacggcggcgcggcacgggagccctgctctttccccatggagccgcttcggagggcagaagaggggcatgttcatccagacgcagtcgaccccgaacccgcagtcgctcatgttctatcctggaaagccggttatggaggttgggagctctgatttcccgaatgctcggaccgcgatgacatctcctttggccaaggcgctgtttgcaatcgacggagttaccagagtattctttggatccgattttgtaactgttacaaaatcagaggaaacttcttgggactatcttaagcctgaggtttttgctgtgataatggacttttactcatctgggcaatcactctttctggactcaagtactgcagcttctatggacaccgcaattcatgaggatgattcagaaatagttgcaatgataaaagagttgctggagactcgcattcgaccagctgttcaagatgatggtggtgacattgaatatcgaggatttgatccagaaacagggatagttaagctaaaaatgcaaggtgcctgcagtggatgtccaagttcgtcagtcacattgaagtctgggatagaaaacatgctcatgcattatgtccctgaggtgaaaggagtagagcaagaacttgatggtgacgaggaagctgaactgactggccagttggaatga</cdnaseq>

Protein Sequence

<aaseq>MARRRVAALASQLLRRQLLMRRPPPRFLSSAAAAASGPLDRLRS PPFARTAARHGSPALSPWSRFGGQKRGMFIQTQSTPNPQSLMFYPGKPVMEVGSSDFP NARTAMTSPLAKALFAIDGVTRVFFGSDFVTVTKSEETSWDYLKPEVFAVIMDFYSSG QSLFLDSSTAASMDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGI VKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDGDEEAELTGQLE</aaseq>

Gene Sequence

<dnaseqindica>65..263#629..790#1774..1949#2826..2929#3015..3126#3317..3382#attggagacccagccttcctctcgccgccgccgacgccgacgacgaggagaggaggaggtggccatggcgaggcggagggtcgcggcgctcgcgtcccagctcctgcggaggcagctgctcatgcggagacccccgccgcggttcctctcatccgcggcggcggcggcttctggccccctcgaccgcctcaggtcgccgcccttcgcgcgcacggcggcgcggcacgggagccctgctctttccccatggagccgcttcggaggtcagggtctacctcttccttctttatttttttttctatcgtggaattcttcgttagggatgtgggatgattaaagatgcggatcttttttacccaactagtttagcgcaagatttgtgttcttgatcgaagtaacgatttgtttgcgtagcttgcttgatcatatttgcggtggattaggattgatgtttttaggacctgaggttatctagcctagttactgtcctgcaggattttagtacttcttttagatgacaggaaatgatgtgatggttttggtggctgaaatgggattttattttgaattctctgtctaatgcttgcttaactcatgtggttttgtttggaattgatgtgatgggcagggcagaagaggggcatgttcatccagacgcagtcgaccccgaacccgcagtcgctcatgttctatcctggaaagccggttatggaggttgggagctctgatttcccgaatgctcggaccgcgatgacatctcctttggccaaggcgctgtttgcaatcgacggtatttctttcctgttccgctagttacctgttggtgttaatcaattcaccatctcagcttccttgaatatctcggttatatgtttccttgtaaaatcctctggttgtcctcttaatatatatgattagttaccactcttactggccaactctttcaatgtatcgagtcttcctaggacactctttatacaaataagctatatcatcttccatttttggtacaaactataagtaactttattctgtgagttggtatttaactatattgtattccttctgtttaacttgtgttctatttgcctttttcagttcttgttgatattttgttattaaaacaaagttagctgttgtagataacttttgtgagatgcaactgaaatgtgccttacaaagcaatgtgcactgacatgggttaccaaaatgcttgcttaagtaaccaacgtagttgcttagagactccttaaaaatgtagttgcttagagcccagagccaagcaaacttggtcgtttaatgctagcattgagctgtgtaaatgataaagatgtggcaaaccatactgtgagaagatgacattggtggaattgtctgaaggcaaaagaaactcaaaccaaaagcaataatcttaatatctttaattctggatgaaatgatatatctgaagctgctggttgttaattcccataatgtttcacatttgctatgaacgtgcaacatttcgttgtttaatcatccaaaataacacaccaccacaagtgtttaaggcttagtggtatcatgatggcctgtaacacataattttatcctgccatgttttccattaactatataaagtacctttttgaagccataacagcaaaatcatgctaagagtcagaagatattctcgtagcagtaaatatttctagaacaacttcttcaaatttgtcatgagtgttcatttgttttatttactttgacattatgttgactggtgactacatgcaggagttaccagagtattctttggatccgattttgtaactgttacaaaatcagaggaaacttcttgggactatcttaagcctgaggtttttgctgtgataatggacttttactcatctgggcaatcactctttctggactcaagtactgcagcttctatggacaccgcaattcatgaggtatcccagacaactttagtgtagatcttacattccattagtataacttttagctgttcctagtgatactgcgcaaagtggccatctgtcagacccattgcagcatatgcattgtatttaggatactggtattaggtaagttctaattgtcagtgattagtaccaaaattatgacaggcagatctatcttttattatttgcgaatctgtgtctctatggataagttatattcagcagtaaacgaaaagtagcctaaaaaggattcaaatggagccctgattaccatttgatttggttctagggaaaattgcttatctgtttaaatttgaatgtgttcattgcacgtgtaactagtagttactgcttacatgtggtggtgttgtgatgatacaatatagatattcgctaagatatcttctaaagtgctcctgaataatgctgctaagttgatgaatatgtacttctaccaattattgaaatgttaatgctgtaaattcctcttgaaccaagaagttatgcaaggtagaagtaacatcacatattgttatcaattaaaaaactgttgtcatgttggtaagagtgtctgcttgagatgttaaggcagcgttcgttccagtaagtttgaggaagaaagcacatcgttttccgcgtgcacgcttcccaaactactaaatggtgcgttttttacaaaaattttctataggaaagttcttttaaaaaatcacattaatccatttttgaaatttaaaatagttaataatcaattaatcacgagctaatggctcacctcgttttgcgtatcttcctaatctcctcaatcccctcctcctcaaacacaccctaagtattttcacatatttttcctctatgccataggatgattcagaaatagttgcaatgataaaagagttgctggagactcgcattcgaccagctgttcaagatgatggtggtgacattgaatatcgaggatttgatccgttagtctatctctctcatgttcatgtgcagtgctgattttaagaattttaattgcatggtctcactatgatgatatcttttcagagaaacagggatagttaagctaaaaatgcaaggtgcctgcagtggatgtccaagttcgtcagtcacattgaagtctgggatagaaaacatgctcatgcattatgtccctgaggtatctcttctgtgctttatttctgtttcctcaaaacctccactccttttggctcattatataaggtgttttatctgataagtaaaatgttgaaagaagttgcaattcctattagtttgttcagactgcttaaagcagtaatttatcctttgatctagcgaaattttaatatttcacacttctttggcaggtgaaaggagtagagcaagaacttgatggtgacgaggaagctgaactgactggccagttggaatgacttttctttacggccaaatctcaacatcttcacatgtcgagggaaactttgcatcgttgtttgtgaaaatcaatccttcaaaaaccatagtcactttctttgttttgagatcaggactagttcaaagttttcaccacgaatagagagctgtaattttgaacctgatgtatgcaacagcgaagaagcatactttcatagattgtagaggcagcgttaactagcctacacaaatatcagttgcaatagggcttaaataaagtgatacagtgagttgatcactgcttttatctaatccttgtatatgccgagcctttcttatctaagcagagctgatcagtgattactacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0155300, RefSeq:Os05g0155300