Os05g0159200

From RiceWiki
Revision as of 20:04, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0159200

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001061250.1 GI:115462230 GeneID:4337878

Length

4043 bp

Definition

Oryza sativa Japonica Group Os05g0159200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3470764..3474806

Sequence Coding Region

3471117..3471364,3471485..3471746,3471855..3472009,3472162..3472347,3474271..3474715

Expression

GEO Profiles:Os05g0159200

Genome Context

<gbrowseImage1> name=NC_008398:3470764..3474806 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3470764..3474806 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggcgagccccaccaacggcggaggcggaggcgggaacaaggtgatcagcctgcgcctgcagtactactgcgtgctcgcggcggtggtggtggcggtcatggtgctctcgctcgcgttcgtctcgccgtccgccatgggcgccgccgtcaggcagaacctcggctccgtcgtcgccgccaccgccgccgccggagagggagcggacgcctccgccgccgccgccggagccggagtggcggctacaacggccgcggaggaggagcgtgagcaggcggcggcggccggggtggtgctgttcaacttcggcgactccaactccgacaccggcggcgtggcggcggcgggggggatccggatcatgccgccggagggccgcacctacttccaccaccccaccggccgcctctccgacggccgcgtcatcatcgacttcatctgtgagagcttgaatacacgtgaactgaacccatacctgaagtcaattggttcagactacagcaatggtgtcaacttcgctatggctggctcaacagtatcacacggcgtctctccctattccttgaatgtccaagtcgaccagtttgtgtacttcaagcacagatccctggagctcttcgaacgagggcagaaagggccagtgagcaaggagggcttcgagaacgctctatacatgatggacatcggccacaacgatgtggctggtgtgatgcacactccatctgataactgggacaaaaaattcagcaagatcgtcagtgagatcaaagacgcgattcggattctgtacgacaacggcgcgaggaagttctggatacatggcaccggcgcccttggctgcctacctgcactggtggtgcaggagaagggtgagcacgacgcccatggctgcctggcgaattacaacaaggctgcacggcagttcaacaagaagctgagccacctctgcgacgaaatgcggttgcagctgaagaacgccaccgtcgtgtacaccgacatgtttgccatcaagtacgacttcgtcgccaaccacaccaaatatgggatcaagtggccgttgatggtgtgctgcggcaacggtgggcctccatacaacttcaagccagggaaatttggctgcgatgatctctgcgagccaggatcaaaggtgctaagctgggatggtgtgcacttcactgattttggcagtggcctcgcggctaagctcgcgatgagtggtgagtactccaagcccaaagtgaagctggcaagcttggtcaatgctggctccaataaatcatccgattcttga</cdnaseq>

Protein Sequence

<aaseq>MAMASPTNGGGGGGNKVISLRLQYYCVLAAVVVAVMVLSLAFVS PSAMGAAVRQNLGSVVAATAAAGEGADASAAAAGAGVAATTAAEEEREQAAAAGVVLF NFGDSNSDTGGVAAAGGIRIMPPEGRTYFHHPTGRLSDGRVIIDFICESLNTRELNPY LKSIGSDYSNGVNFAMAGSTVSHGVSPYSLNVQVDQFVYFKHRSLELFERGQKGPVSK EGFENALYMMDIGHNDVAGVMHTPSDNWDKKFSKIVSEIKDAIRILYDNGARKFWIHG TGALGCLPALVVQEKGEHDAHGCLANYNKAARQFNKKLSHLCDEMRLQLKNATVVYTD MFAIKYDFVANHTKYGIKWPLMVCCGNGGPPYNFKPGKFGCDDLCEPGSKVLSWDGVH FTDFGSGLAAKLAMSGEYSKPKVKLASLVNAGSNKSSDS</aaseq>

Gene Sequence

<dnaseqindica>3443..3690#3061..3322#2798..2952#2460..2645#92..536#accgctctttttttgagagagaagagaagagaaactcagccatcgtcgtcttcttcctccgcgaaggcgagagctcaggcgagctcgcgcgatggccatggcgagccccaccaacggcggaggcggaggcgggaacaaggtgatcagcctgcgcctgcagtactactgcgtgctcgcggcggtggtggtggcggtcatggtgctctcgctcgcgttcgtctcgccgtccgccatgggcgccgccgtcaggcagaacctcggctccgtcgtcgccgccaccgccgccgccggagagggagcggacgcctccgccgccgccgccggagccggagtggcggctacaacggccgcggaggaggagcgtgagcaggcggcggcggccggggtggtgctgttcaacttcggcgactccaactccgacaccggcggcgtggcggcggcgggggggatccggatcatgccgccggagggccgcacctacttccaccaccccaccggccgcctctccgacggccgcgtcatcatcgacttcatctgtgagttcaatcaatctctccattaattaatcatttcgcctcttgttggttgctgccatttagccataaacccagtccttaatcgcgtacaaaatcatttgatttggaagcttcttaagccgtatgattagttgattactgtagaatttgaactactacgtgtgaaatttccacgaatttcacccctccaagcgacccatttctctagaaattatactgtttcatctgaaattcgttgaccattcgagtaactatcttgctataatctgggttggtagagcaaaatctagcaaatcagcaagctgtgagatgagtgattccgaataatttggtcgccgccgacgtggaactggaggaggggattaaaaaatggggagagtttggtggccgaagcagtagcagcatgtgcctaacaatttccgcatttttctcctttgccaattgggacagaggaaacctatgatctgtatctttgacttgctcctctctgtgaccgggttggatggatatgtctgggttgttgatgtgaactgctcgacttaagaagtagtattagttctccctgtctgtcacctgtgtctgcaaattgcaacccaggtccttgaggagactgattcttgcactttcttgtacttagatctaacccaagttagattactgatccaaatggtcattggatggaagctcagatgggcactccaatcacttgattgactgaaatgatagttggttgttttttggattcctgttttgctcttaccttgtgtgactgtaacgtgctagctgctgggtcaacactaggaaattgtcattaacgatgtgatcagtgcacgacatgggtggttagagagttgaacctaccagacacatggttatattttccaatttatgttcttatagttgcccgtgaatgatgtcagggtgcagagagtcgtcctattacatacatcttagttactgggtcaaaactttttcctatttagaatggattttggatggataattccacaagattttaggcttaggagaataaatccacaagttcatccacttttttcttctattgcctctgatctgatgtgctgtgaacaaatcaatttcttattgtttgtgagtactatatgcttagataattattccactcacggagagtacagagcccttgatttgtttatcttcagttcttcatttgaaataagcaatttacatattagtatggtccaaacacatgcatgctaccatgtgatagttaatgattctcacatagtatcatgtatatattatctgtaaatcacatggagtagacccatccatgacatgcattttgttggtgggataaagagtgtattatctgtgcatgccccttttcttctgagaatttggtgggaaatccatttatcattgttcctgcattaggacaggcagaatctgtactttcgttatgtggtcatgagagttgcaagctttaacttccatgggtgaccccaagtacagacatagaagatatcacatatatgcatatgtatgattgagatgtgcacatggtagggacacatgagcaatatctttggatgaggcccatattactcttagcagcccttggttataagtaacctttcgttatgtttgggccaagatttaattacctagctgtccagaagcctgacaacataacattaacatatttacataagttccaaatattactggtagaccacaaaatgataaatgtagtgaccatgtttagataaatatagtgactagtaaggtgtggtagcaaatgtgaagcttaacacaatatggggatcttgaaggtggtaaaacaatatcatagaaatactgctactgctgctgctgctgctgttgtcacagtaatttaatgtccctttaaatctacccggtcgctgatgatgatgttttcaggtgagagcttgaatacacgtgaactgaacccatacctgaagtcaattggttcagactacagcaatggtgtcaacttcgctatggctggctcaacagtatcacacggcgtctctccctattccttgaatgtccaagtcgaccagtttgtgtacttcaagcacagatccctggagctcttcgaacgaggtttgctttgctgcttgctgcttgaataagtttgtgctgttacatttacaattgcgagaaaaaagaagacagtttaaacctgaaaaaaatatagaagacagtagctgaaaattggaaatattgatgataaaacatcatgcatttatttgcagggcagaaagggccagtgagcaaggagggcttcgagaacgctctatacatgatggacatcggccacaacgatgtggctggtgtgatgcacactccatctgataactgggacaaaaaattcagcaagatcgtcagtgagatcaaagacgcgattcgggtaaattacacactacaatacagcatctgaaacttccgtttgcgagtgtagtagtaactcttaagcagttacactgacagaagctttggttgtttccaacatccacagattctgtacgacaacggcgcgaggaagttctggatacatggcaccggcgcccttggctgcctacctgcactggtggtgcaggagaagggtgagcacgacgcccatggctgcctggcgaattacaacaaggctgcacggcagttcaacaagaagctgagccacctctgcgacgaaatgcggttgcagctgaagaacgccaccgtcgtgtacaccgacatgtttgccatcaagtacgacttcgtcgccaaccacaccaaatatggtatgactctcccatctttaaaagttcagaacatttggataattgtgttcacattcatgaataactttatggtagtttcatatattgcatctgaattcgctcacattcttgtgtgttcagggatcaagtggccgttgatggtgtgctgcggcaacggtgggcctccatacaacttcaagccagggaaatttggctgcgatgatctctgcgagccaggatcaaaggtgctaagctgggatggtgtgcacttcactgattttggcagtggcctcgcggctaagctcgcgatgagtggtgagtactccaagcccaaagtgaagctggcaagcttggtcaatgctggctccaataaatcatccgattcttgatgccaagaaacgaataaatatcatctggatgaatcatggatccatggatggatgatgatgaatcgattcacattatgatggtgagtaatgtggattgatgggtatgtcccaacagaattggttcttacattgattagctcctttgttgataaaaaaaggcaaagtaacaatggagaggctccttcagctacaaagtagagaagttcatggttttttttttttctgaacttttgtgttgagtacaaagattttgtactgttgatgtacgtgtatagacaattttatggaagctgcaagcttccagacctcaagaaaattgatgtaagatagttttacttttatctcttcagagg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0159200, RefSeq:Os05g0159200