Os05g0161901

From RiceWiki
Revision as of 20:04, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0161901

Description

Hypothetical protein

Version

NM_001187301.1 GI:297723732 GeneID:9270001

Length

2996 bp

Definition

Oryza sativa Japonica Group Os05g0161901, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3621104..3624099

Sequence Coding Region

3621104..3621209,3621314..3621453,3621562..3621634,3621729..3621790,3623639..3623755
,3624046..3624099

Expression

GEO Profiles:Os05g0161901

Genome Context

<gbrowseImage1> name=NC_008398:3621104..3624099 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3621104..3624099 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccacctccggggctcgctgagaaatgcaaacggacgttggatgatccatgccttggaagaaggttggctgatgggcgaagtgatcactgcctcactggccaagaggacggtgtgaccaattcagcaaatgatagatcgtcttcaatgtggaaatgggagtggatggacgatcagacgatgtggagtgagtgccatcagcattctgcagtctcttgcagtgttcttattgcaggcctttggcatgaagctagtggcgccatgggtcatggcaagctataccaatggaacaaggttgcaagaactacttgcaagctagcacctaatcactggctcaagccacattcggcatacggccataattcagctactccgatgaatgcctggataccaagaacatttggcaccaatgcatatgctggaccatgcagctctatttttcagactaaacagacacaagatggtgacagtatcaagcaccaccatatacatgatcagactgacaagcacaagatggtgacagtatcaaccaccaacacctacatcaggtaa</cdnaseq>

Protein Sequence

<aaseq>MPPPGLAEKCKRTLDDPCLGRRLADGRSDHCLTGQEDGVTNSAN DRSSSMWKWEWMDDQTMWSECHQHSAVSCSVLIAGLWHEASGAMGHGKLYQWNKVART TCKLAPNHWLKPHSAYGHNSATPMNAWIPRTFGTNAYAGPCSSIFQTKQTQDGDSIKH HHIHDQTDKHKMVTVSTTNTYIR</aaseq>

Gene Sequence

<dnaseqindica>1..106#211..350#459..531#626..687#2536..2652#2943..2996#atgccacctccggggctcgctgagaaatgcaaacggacgttggatgatccatgccttggaagaaggttggctgatgggcgaagtgatcactgcctcactggccaaggtaacactgtgtttgcaggcggtgtatgattgctctttttcgtgtgatccgcacagtcgcagagttcaggccttgttcagctgcgattatttattggttttcagaggacggtgtgaccaattcagcaaatgatagatcgtcttcaatgtggaaatgggagtggatggacgatcagacgatgtggagtgagtgccatcagcattctgcagtctcttgcagtgttcttattgcaggcctttggcatgtcagtaatctgggccctgtctgtcttcaatggcttggagggagatgacttctttcctaatgagtgaggacctaatttttttcatgttgatggcatggctaaagccaggaagctagtggcgccatgggtcatggcaagctataccaatggaacaaggttgcaagaactacttgcaagctaggtattattattaatgacaccttagtggatgtgtcttgcaacttgcagcacgatcatgtttgatcaaaactctgtgctatgatgctggaaatcagcacctaatcactggctcaagccacattcggcatacggccataattcagctactccgatgaatgtaaatgttgctgtttctctagtctctataaaatttgcagaagccaagattggtaggaaaattattgtgtactgctgaagaggaaaagctcaagcaaaattctgttcttatcagtcatcccccccaagcccagatgcagcaaagaagaacaaacttcgtgtagtcctcaagtcatacaatccttcatgcagttagtgtgctgatgctgtgatgatcaatgctaaatagataaaattcacatctccactttttgtaaggtatgatttttcacctctgattctgcatgtgttttagttggatccatccagttatacttgatgtttctttcatatttcaactgttttaaatctttatataccacagtaaatgtcagaggtaaggcagaaaaggggaagcactgaaagttgcgaataacatacttacctgtagagcaaaattttcttgttgggtactgcacaaagaacattataaaccttatccatcagtaaggcttgtggagaaagtaagcatatggggcaaggaacagtaaataaaaggaaaaggaccctttcaatcacaagaggagaaataaattttccaagatcatgaatgaaatgtttgtttatttaattcctgaacaacaaacaagataaccttaagcaggcatcatcggtgttgacatcattctgttttacctttggtagtgacaataactaacaaaaagcaaagttattcaatccagaatcttttgataggaactgaagaactactttgtgtttgctgtcaaaaaaaaaaaactacgttgcgctatagttgacttaaattttgttatccatgttcattgattgttccgttgcaattggactactggtttaaaaacttaacctgaggctaccaaaccacttatgctatcattacacattactgatgagaagcaaacaaagggttagtcatatgaactcgaagatgcttgtttgaccatctgtcgcagttttaactgttattgcattttcttaacatgtaagcataaggactttctaataaatgaaggctgacgtggcagtgactaacagcataataaaggaaatcaatgcgaaattcatcgattgtttcattgttattaagctgtatttccatgtaagaattaagatgtggaaacattttacaattttacatagtagttcaattagctttcataaaggttaacctccaaaaggagacaccttattacacctaaataaataacttgtaaagattaaaatcaactggagtataggaaggactatatttatatgaaaagtaaaaaaaaacattttgttgtcaaaaacatagaatccgtttgtgctagtggtacaactccaaacccccaagttagcaaaatggttcttaaatactgaaatatcttgagacgtacagtactctgataggtcgattattggatcaatacttaataacgagtagttggattggatcatatgaaggtctagttgcagtgtcgagtattggtattagtattagtagcccgagtcaactggattaaacaaagtaagggttggtgagacactgagactcgtctcaaccatgattgggcgaccttagtctaacagagacttttaatgtacgatgattatattaaacatacacttgttcctaatgccatgtttatcgccataagctgcgggacagacttggataacaagaatatgctttgcatgggaacccttctttttccaagacccttaatatttcactgacaaaggcatgtagcaaagattttgagaaacaatttgtagctctttttttatgaataaatgctgatcaatagccttttttttctttgctaatcatatgtgttcgcaatatgaacaggcctggataccaagaacatttggcaccaatgcatatgctggaccatgcagctctatttttcagactaaacagacacaagatggtgacagtatcaagcaccaccatatacatgatcaggtaacacagaacatgagaacaagatctgatgcctctcgatcattgcacggtaacaagcaattgaagcatcttgtcagctcatcacactaaacatcacactctgctgtctgtacacgcatgcaagcatgcaaaggtttggtaaaacgagttgtagctcttttgttatgagtaaatgctgatcaatagccatttttatttgccaatcttatgtgcaaggttaacaatatgaacaggccccaagaacaacatctgacaccagtgcatgctggatgcaacaatttatttttcagactgacaagcacaagatggtgacagtatcaaccaccaacacctacatcaggtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0161901, RefSeq:Os05g0161901