Os05g0173700

From RiceWiki
Revision as of 20:05, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os05g0173700

Description

Similar to DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) (Fragment)

Version

NM_001061318.1 GI:115462366 GeneID:4337953

Length

1866 bp

Definition

Oryza sativa Japonica Group Os05g0173700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4392307..4394172

Sequence Coding Region

4392897..4393017,4393090..4393274

Expression

GEO Profiles:Os05g0173700

Genome Context

<gbrowseImage1> name=NC_008398:4392307..4394172 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4392307..4394172 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tatccttcaattgccaattcccagctccgtagagcagtcatgaccattgccctttcaactactggaagggtttcgtctggtgttggtttgcctgctgctgtcacttctgatcgagagactggggaaagaagacagtctggtggcctggtggctggtgccatagttcttgctgatcgttgtgctgtctgcattgatgagtttgataagatgaatgaccaggacagagtagctatacatgcagttttggaacataaaaccgtgactattgcaggaatacatgcatcgctaaatgcaagatttttctga</cdnaseq>

Protein Sequence

<aaseq>YPSIANSQLRRAVMTIALSTTGRVSSGVGLPAAVTSDRETGERR QSGGLVAGAIVLADRCAVCIDEFDKMNDQDRVAIHAVLEHKTVTIAGIHASLNARFF</aaseq>

Gene Sequence

<dnaseqindica>591..711#784..968#gatggtgatggtggcggggttgccggtgaggatggggccgagaggtagtacgaggcgtgggacctctccgacaacgaggcggcgctgggctgatctggggggtggacctccgcggggaggcgttaaggaggtcagcggcgcggaggagctctctgccctcgagtcggcaaggggacggtgcagactttgttggcggcggcggagacgagcaaggtcggcggagctgccgccgtgcgggcggcattcggtggcccgtggccccctaccaccagtgacggcaacgggggtcccccggcggatccgtcgccgcacgaccggccttcggcggcggcggatccggccgtgcgcgccgcccgttagagctggcgcgtttacgcgcctccgagccgcgtcggtccccccccgcccccgcgggctgcaaatctgagtgagccggtggtgctggtgtggtcgacgtgctggtggcgggaccgtacgtgggcctcgcggttccgggtctccccatcccaacggcgagttgggcggcgagaggaggcggcttggtgcagtcccgtggcgacgtgggcagcgaagggagcaggtcacagtgatatccttcaattgccaattcccagctccgtagagcagtcatgaccattgccctttcaactactggaagggtttcgtctggtgttggtttgcctgctgctgtcacttctgatcgagagactggtaattgttgaaactttctttcgtacattcttttggttcctatagaagtcctgaacaaaatcctgtggacaggggaaagaagacagtctggtggcctggtggctggtgccatagttcttgctgatcgttgtgctgtctgcattgatgagtttgataagatgaatgaccaggacagagtagctatacatgcagttttggaacataaaaccgtgactattgcaggaatacatgcatcgctaaatgcaagatttttctgaacatgttgcatggatgcatcggtgttgcactgatgatggaggtatttttgtgtttttacaatgttaagttggcactactctgatggttggtgccttactttttattgtgttgtgttacagtgttagcagggacatacatcgcaagattaaacacaagtattaaaccaaactgaaattcatgccacgaatttaatatcaagtcttgaggtagctgctttctctcattttctccctttacgacatgtttctcattctttgaatgatcaaactcatatgtttggatgtctgaatttggatcgacacagccgctggcgagactgaacagatccaaatggtatgagttctcttccttctccttcattttcttttcttctattttgcagtccttcagaatgaatcaatgcatctcggttcttaatttggagctgtatgcacaactaaatatcaaagctgaaagtagaaaatcttttttacttactttaccatgtggtcatgcagattttttatcaagaagctacaaaaagttataggctatgttgaatgtttcctaatggagctgacaaatgaaagagaatggatgaatcctggtaaatgtgattgtgttcattggagaaatgtaatggttcaaagtagcaacttttcctccaagctatataaatataatcccgaactacggtcggattattgcacgtagacatagccaagatggtatatggatgtgcttgaccatgttttatatacatgaagggatgtgaacatcctgttagcgacaaattgaaggcaaatattcagtttgatagctcatgtcgatggtactttcttcctgtacccattcaatatttattaagcttacatgtacaaatattccgtttcatatatcgaatgcaatgtattggac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0173700, RefSeq:Os05g0173700