Os05g0199800
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0199800 |
|---|---|
| Description |
Similar to BHLH transcription activator Ivory seed |
| Version |
NM_001061414.1 GI:115462558 GeneID:4338056 |
| Length |
2216 bp |
| Definition |
Oryza sativa Japonica Group Os05g0199800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:6188672..6190887 |
| Sequence Coding Region |
6188852..6188928,6189069..6189183,6189296..6189892,6190316..6190765 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:6188672..6190887 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:6188672..6190887 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggacggcggcagctggatgctcaaggcggccgccgccggcgacatgcacggcggcgccggcgacaccatgatcagatgcagctggagcgacatggcgactactgatcagctgctgcgccaccacgagcaggagccggcgatgacgatgatgatgaactcgcagtcgcaggccatgcagcagcagcttagccagatctacatgctgatggacatggaggagcacgatcatcagtacgccacgccgccgtcgccgtcgtcgtcctccttccgctccttctccgccgggacgacgacgacgacgacgagccgcgacgacaactcgtcgctcatgctcgccgccgccgccgcctcttgccaccaccagacaacggaggtgtcgtcgcagatactactaccacggccgggacaagcagcacggcggagcagcggcggccatggcgccgccgccgccgccaccgcgttccggccgtactcccggtacctgggcccgaagaagcatctcctccggcggccaggggcggcgaccaccgccaccggcggcggcggtggacagagggcgttcaagaaggccatatcggtgctgtcaaagatccacgcggcgaggctcgcgcagtactaccagatcatggagatggccgcgcgggcttcgccagcggccaccgccggcggcggcggcggcgagaaccagcagctgcagctgcagcacgtcttgtcggagcgcaagcgccgggagaagctcaacgatagcttcaaggctctcagggacgtgctcccacccgccaccaagaaggacaaagcatcagtgctgatgagagcaaaggactacgtgaacgtcctcaaggcgaggatagctgagctggaggagaagaacaggaagctatctgaatcacagcagctgcacgccggcgacggcgacggcgagcgagacgacggacctgacgatgacaagattgaggtcaacacgagcagatcagcggcagatcagggcagttcaccgaacaagtgtcaagagcttcatctgaagatagtgctggggtcgtcgtcggggtgcagtgccatggatgccgtggctggcatcctgcagggtctcaacgagaagagggatgtcagcttgttggccacagggcataattccagcagcagcagcagcagtggtcgtcgtcgtcttcttccccgtgcaaagtcttctcaacaacctgccgtaagattacaaactctatgtaaattgagtagataa</cdnaseq> |
| Protein Sequence |
<aaseq>MDGGSWMLKAAAAGDMHGGAGDTMIRCSWSDMATTDQLLRHHEQ EPAMTMMMNSQSQAMQQQLSQIYMLMDMEEHDHQYATPPSPSSSSFRSFSAGTTTTTT SRDDNSSLMLAAAAASCHHQTTEVSSQILLPRPGQAARRSSGGHGAAAAATAFRPYSR YLGPKKHLLRRPGAATTATGGGGGQRAFKKAISVLSKIHAARLAQYYQIMEMAARASP AATAGGGGGENQQLQLQHVLSERKRREKLNDSFKALRDVLPPATKKDKASVLMRAKDY VNVLKARIAELEEKNRKLSESQQLHAGDGDGERDDGPDDDKIEVNTSRSAADQGSSPN KCQELHLKIVLGSSSGCSAMDAVAGILQGLNEKRDVSLLATGHNSSSSSSSGRRRLLP RAKSSQQPAVRLQTLCKLSR</aaseq> |
| Gene Sequence |
<dnaseqindica>181..257#398..512#625..1221#1645..2094#aattaatttgtgacgattaagtgtgttcacagcttaattagctcctactagctagtatatatacacaccattcccaatcaaagacgagatagctcaagaagcagccaaattaaagagcaattaatcgattgaacgcgactagagctagctcgatccgatcgtgcgtacgtacgtacaggcatggacggcggcagctggatgctcaaggcggccgccgccggcgacatgcacggcggcgccggcgacaccatgatcaggtatatatgtattaattacacggtgatcaccggccggcggcggcctggtcgtcgttgccacgcatgcagctatccttgatatcttaagcttctgcaggctgtaattaattaattaattagttaatttgtgcttgcatcagatgcagctggagcgacatggcgactactgatcagctgctgcgccaccacgagcaggagccggcgatgacgatgatgatgaactcgcagtcgcaggccatgcagcagcagcttagccaggcaattttcatgattaattcatcttgtttattgctagtaattgacgaactttgttttgttgtggagtaatcatgttttcatcatcgtgttcgttgcgaattatttgattcagatctacatgctgatggacatggaggagcacgatcatcagtacgccacgccgccgtcgccgtcgtcgtcctccttccgctccttctccgccgggacgacgacgacgacgacgagccgcgacgacaactcgtcgctcatgctcgccgccgccgccgcctcttgccaccaccagacaacggaggtgtcgtcgcagatactactaccacggccgggacaagcagcacggcggagcagcggcggccatggcgccgccgccgccgccaccgcgttccggccgtactcccggtacctgggcccgaagaagcatctcctccggcggccaggggcggcgaccaccgccaccggcggcggcggtggacagagggcgttcaagaaggccatatcggtgctgtcaaagatccacgcggcgaggctcgcgcagtactaccagatcatggagatggccgcgcgggcttcgccagcggccaccgccggcggcggcggcggcgagaaccagcagctgcagctgcagcacgtcttgtcggagcgcaagcgccgggagaagctcaacgatagcttcaaggctctcagggacgtgctcccacccgccaccaaggtccgtctacttaccgaccaatttaatctaaaagcttacgtaaatatagaatctcgagcaaaatctgttgtcttgcttgacgaaagattctcacataatcccaaactctctcaaatctagattgttacctggagaatatgtagctatagaattcagaattagcattcagaatacaaactatagttatagaattaagaaaataaaatggagaccagaagctgaaaatctagcttctagctttttctagattctcgctagcttggctactcataaggtgcttatcaatatcttaagcttagctaaaaatgactagcatggctaatatcagttatcctatatatgctttattaatagtaacatttataaattttaaccaattaattaatgctaattgatttgtaacttgtgcgacgatgagcacagaaggacaaagcatcagtgctgatgagagcaaaggactacgtgaacgtcctcaaggcgaggatagctgagctggaggagaagaacaggaagctatctgaatcacagcagctgcacgccggcgacggcgacggcgagcgagacgacggacctgacgatgacaagattgaggtcaacacgagcagatcagcggcagatcagggcagttcaccgaacaagtgtcaagagcttcatctgaagatagtgctggggtcgtcgtcggggtgcagtgccatggatgccgtggctggcatcctgcagggtctcaacgagaagagggatgtcagcttgttggccacagggcataattccagcagcagcagcagcagtggtcgtcgtcgtcttcttccccgtgcaaagtcttctcaacaacctgccgtaagattacaaactctatgtaaattgagtagataaatgattttaattaattactccgtttgtttgttaatttttaggggacattttgaatgctcatgccataaatttctctgcatattcttatgcgccgtatatatgatccttttttatatactagt</dnaseqindica> |
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