Os05g0228400
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os05g0228400 |
|---|---|
| Description |
Helix-loop-helix DNA-binding domain containing protein |
| Version |
NM_001061506.2 GI:297604077 GeneID:4338155 |
| Length |
6565 bp |
| Definition |
Oryza sativa Japonica Group Os05g0228400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:7813745..7820309 |
| Sequence Coding Region |
7814363..7814500,7814784..7814843,7814985..7815035,7816778..7816831,7818264..7818329 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:7813745..7820309 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:7813745..7820309 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggttggtggcatgaaggaggagggctccatggctcaagctgcagccactgctgctgctgctgcttacagcttctatgggagccaccttgctggtgatcatcagcatgagatccaagcagcagcagcaggaggaggtgctagcaacaagtctcagctgagccagatgctcatggcttcctctcctaggtcatgcatcaccaccagcctcggcagcaacatgctcgacttctccaacaccgcggcgccgccggagctccggagccaccaccacaactccgataattcatcagagtgtaacagcacagcgactggttcggccctcaagaaggctagggttcaggcctcctcttcagcacaatctactctaaaggtgaggaaggagaggctaggggatagaataactgcacttcatcagattgtatccccatttggcaagactgacacagcgtctgtactgcaagagaccattggctatatcagattcctcctgagtcaaattgaggctctgagctacccttacatgggcgacgccaacgggaccggtcctatgcaaaatggaccagttggagaaaggaaccctggcctcttcccggaataccctggccagttgctaaaccataatggcaacactggagcacagcagcctgcagcccaacctgagcagcagggagcaaacgacgatggaaagaaggacctgaggagccgggggctgtgcctcgttccagtgtcgtgcacgtcgcactttggaggggacaatgccgctgactactgggccccggcgccgctcggcgggatcctacggtag</cdnaseq> |
| Protein Sequence |
<aaseq>MVGGMKEEGSMAQAAATAAAAAYSFYGSHLAGDHQHEIQAAAAG GGASNKSQLSQMLMASSPRSCITTSLGSNMLDFSNTAAPPELRSHHHNSDNSSECNST ATGSALKKARVQASSSAQSTLKVRKERLGDRITALHQIVSPFGKTDTASVLQETIGYI RFLLSQIEALSYPYMGDANGTGPMQNGPVGERNPGLFPEYPGQLLNHNGNTGAQQPAA QPEQQGANDDGKKDLRSRGLCLVPVSCTSHFGGDNAADYWAPAPLGGILR</aaseq> |
| Gene Sequence |
<dnaseqindica>5810..5947#5467..5526#5275..5325#3479..3532#1981..2046#1562..1627#1258..1335#26..319#tgctgcagctgcagccagtgcatgcatggttggtggcatgaaggaggagggctccatggctcaagctgcagccactgctgctgctgctgcttacagcttctatgggagccaccttgctggtgatcatcagcatgagatccaagcagcagcagcaggaggaggtgctagcaacaagtctcagctgagccagatgctcatggcttcctctcctaggtcatgcatcaccaccagcctcggcagcaacatgctcgacttctccaacaccgcggcgccgccggagctccggagccaccaccacaactccgataattcatcagaggtaagattgtaatttgatcttggtgtgtgtagatcattagctctcaagtagtattggtcttgcatcttgttctcttttgctttgtcattttccaaaattttttttagataaatgtttggcattttttatggcttgtttcaattatacatgcatatgcatacataaggcaggatgcactgtaggtctagaggccagagatatgtattcttcatattctattttcttttaaaaaaaatagctacatggaatgcaatggattaccaggtgtatccaaaatgagaattttacgtgtttgacagatctttaggtttttcatcgagtatataagctatgttcatcccctctttgaaaagttgcagtttccaaagcatacttctcttcctcatactgctacacatgtttggtggaaaagttataagtttgatcatgttctccctaatgatcctctaggccaaggcttttacgggctgtcaatactcaattaatacaatctcttggcaatggtgcattctgtcctccatagttccacgaattgaaagtgtgctattattattatttatttccatgaaaaaggtacatgttttcatgtcccatgggaaatccactctggtcaaagttaccacttgatgttttgcatagcatgttcttttcatgatatcttggtaagagtgttggtcatgtatacagtatccattgacagagctagcttaacatgagatctttaatttggtcatactcttagccttgttcttctttatggctaactgctgtagtagtacatgagaggtcagtgaatgtttagatgtagaatcactggggagagaattcactttagagagggtagagagatgtgtgtttttttcttcttcttcttctcgggacaagatgaaattggggtcatgattattcacgctttgcctttctttgtctttctctagtgtaacagcacagcgactggttcggccctcaagaaggctagggttcaggcctcctcttcagcacaatctactctaaaggtttcttcctcatcatcctccctgctttccatggcacacaagccccatccctctctctctctctctctgcacgcacgcataaagtgtgcttactttggaagttcgtgcacagaaaatcacaacatttggcagtagtttccatttggaatatcttggattatgtagtatatatgttaacataatccttacattaggaggtttcttaggtgtgataatttgttttcaggtgaggaaggagaggctaggggatagaataactgcacttcatcagattgtatccccatttggcaaggtaacaaaaagacatgaaacttcagttaaccgctttcatggttaattttagagattagtaataagctagcaacaatcagttgcattatatatatataagtatagagggagatggattacatcaagatctgaatgtgttgtcatgcacagtatgcaaataggctatggatgacttagaatagttttattcatatgttgatgatgttacatgcaattatctatagtttgtgccatgccatgcatcgagccagtagcaaggtaagagtagctcctttatttctttgttgctggttttcactcgaggggttgtgtccaagtaaagtaaatctctgacacacgtgcctccttttacagactgacacagcgtctgtactgcaagagaccattggctatatcagattcctcctgagtcaaattgaggtccaatctctctctctcactttctatagctctgtctgcgtgtgtgcgtgtgtgtttaatttagagggtgaaaaaaaatacttcccgttatttttatcaagttcctaattataaatagatatattctaaaatggagagagtgtgatcaatcttctttgtaatgggcatatatattgcataccccatccgtccaagaaaaaactcaattctagctacgaatctggatatatgtgggtttgtctttttttttaagacagaagagtagtatatgtatgggacattgagatggaataagtatgggtgaacagggaatatttgcactgcaggcagttgcagcattgtgccagtctcttcagctactctagctgtttcagccacagtaacatttttccaaggaaaaaaagaaaagaaacttctgcctctgcaaagtggggcccacagaggagtgtccccacaagtaagggacagtagtcgtagaggaggtacatgtgatactggcacacagtgcgggcgggaaacgaaaagatgggagagaatatgcatgcaaaatgggggcggggccgggctaggtctgagcgggagcgcacgctgttaaagttagctgcacggcgagagatggctcatggtcatggctgtgcgtgcatgggcttcagcagctgcatctgcatctgcatctgcggctgcagcgagatcgattgatggagatgtcgttttagccaagtgcaatgtcgttgttatctagttcttcgtctcgtagtgatgggagaccggttaaataggtattggttttaaataaatcgacacctataagtcgatacctattaggtgttttgtactccctctgttttttaatagatgacgctgttgactttttctcacatgtttgactattcgtcttactaaaaaaaattacgtaattgtaatttattttgttatgagttattttatcactcatagtactttaagtgtgatttattaaaaaacggaggtagtagtagtgttctatgtctcaaaatttatagtatttgaatgtgtcacatccggtattagattgattttttataaaatagagtagttgttttatgtgtttcagagaccagtagaggattgactctctctctctctctgctcttctagctttctacatctcttgccctcttttttctaactaaaatgtaggttttacctcggtatccgtctgaatgtttttaaaattgctaaaccgtgtatttcgtgtgaacaatttttataaataagttgctttaaaatattagataaatcttttctttttttcaaaattgtaatgattaaaactcaattaaccgctaataattttctagttgttcatgccctagctctatatttatcttcttaaaaaaacaaacatatgtctctcttgatgaccataggatgttgtttcttgtgtgtgcaggctctgagctacccttacatgggcgacgccaacgggaccggtcctatgcaaaatgtaagttcgttgttgcatctctctctctctctctctctctctttctctcatatttacgcacgtagtataaggctatatatgagcacaaagaggaaaggagtatctatatacgagcgagaagatgccctacacacgtgcaggggtgccgtgcaacgcgaacttaggctagctttgccttggctttgtagatccatactatcataggtgaacaaaactctttatcaaaggcattctaaaaaaaaccctttcatcaaaggttaggctgagtaggatcatccttttggtgacctttggggccaaaggctttagatcttttataaatctttatactacgtgcatgacggcaagctctgttctgaaaacaaatatatataacctccatgaatttatgtgcgaatccagaaaatattttcatgtttgcaaatccatgcatagttgcacgtgtttttttttcatggaatggaagaaaaatttccttaaaaattggggcatttgattagatatatataagaaatagtaactcaaaaaatttaaaacaagtgagtatgtcctgatgatttatatgtttagaataatagatctgaataacctcccaaattaattaattttgtatatgccactgaataactacatgtcctttatacatgcatgaaactcctgccatcaatggcatattgttcagacaatgagggttactactgcatatatacaatatgtatagctatgatatatataatttttttaaagcttagcatgcttaaggcatcaaatcgactagaacatattagccgctaaaaaccaattaatataaatgcactcttgtagatgtataaattttgtgtttctaaagcaaagaaaagtttaacatgccaattttttctgtctgtaaatctatttttgtatagtataactatattataatttattttctgtgttaaatttttattctgcacataaaatgttcatatctatttgcgtaaaactatatcggttatatattatacatttttattacccgtggagaagggacataaaccagtagttttcaatttttttaaagcatggaataaattatcgatgaaaagtctacaatgttggatatcaagaaaattaagaccctacttaagagtttaaatttctcataaactgattgaaaaatattcaagaaaaattataccttgtgtccatatttattttcaaaaaaaaatttatagctactaaatccactttactatctcatatattaaattaatcataggtttatataaaaaagtattcctgtacaaaaaggtttcacgcaatatatcacctcgcaagatttcaacttaaaatataacttatataaggagaataaaaaaagaggaatgccatttgcaattaagtaaagtgtcttagttcagtagttcaagtgaagcagcaaaatagttcatcgtagtaaaattgacttctccattttaaaactttcaaacagcttagtacaagattaattgtgtcatcatcacatgagagaaaaaaaaaacccatgcaaagtacacagacatggataagatagatattaccaccataacgttcttagtttagttgacattggccatatgcatctgagacaaccatgggccagtacaactcatgggttcaatcattttaccacacccaaaaaaatattctcccctcagcttttttgcacgcttgtacgtgcaacgttgacatgtgacacagttactttccttttgattttatagggaccagttggagaaaggaaccctggcctcttcccggaataccctggccaggttagtgtagatctgtacatgcacatgattattaattcttatagatataagaatataatctatctatatagatattcctttccagctccaagccacttttttccttatatcttttttgtttgtgtgtggttccttgtgcagttgctaaaccataatggcaacactggagcacagcagcctgcagcccaacctgagcagcaggtatgtatgctctttgcttagcttcaaagccattttcacaatgatgtatatacatgagtactgtgtcgactagagtgcatggcatgttgttatatataagttttcaagggcaaaattaataccatactcatatgtttctttttccctttttttcactaaaagcacctacatatagttactatatatactgataatagttgcgaaaattaacatgcatgttactagctcctatatgtatttttttctgtataataatttcatggcatttgataattgttattagggagcaaacgacgatggaaagaaggacctgaggagccgggggctgtgcctcgttccagtgtcgtgcacgtcgcactttggaggggacaatgccgctgactactgggccccggcgccgctcggcgggatcctacggtagaatgcatcgttgagattcgtgcatacaaagcgtggcggcacagcgagtactatatgttgatgcatgaggaggctacagacgaaataggtctcttaagaatggagaacagagtgtgcattgggtgcaggagtaacgtcgtcataacatcatgagcagtcattctctggtaagaaaaaaaattacctgtaaggttgattgctcttgatgctatgggagtgagaggtagctagctatagtataattaattaagcttctggatctgcaaattaagaagcttcagttcaagaaggagaccttgcaaaagttgatgccccctttgatatgtatatgtaaaatctagcaagtcagtgaacactttgctcatactaccgtgctttgatttatcatcagaagcagaaaagcttgcgcggtagtgtcaatattccgtcagttgctcggctggtgtatgtaggaaattaaagttgatatcccatatcacatatatgtatattgacagttaatttgtatcagttatttactgagttaagtcagcaatattatttgtcttcgatgttgctgaattatttgtgtgcatctatatatggattttctgtatgtcaatcgacaggaaattagggg</dnaseqindica> 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